version 1.0
Bacteroides fragilis YCH46, complete genome - 1..5277274 4578 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 931 48.53 0 1105980..1109315 - 1111 53712222 - BF0929 - beta-galactosidase 932 44.67 0 1109341..1110231 - 296 53712223 - BF0930 - putative transporter 933 47.96 0 1110343..1111737 - 464 53712224 - BF0931 - putative oxidoreductase 934 43.40 0 1111943..1112101 - 52 53712225 - BF0932 - hypothetical protein 935 50.12 +1 1112843..1113652 - 269 53712226 - BF0934 - hypothetical protein 936 49.00 +1 1113668..1115110 - 480 53712227 - BF0935 - hypothetical protein 937 48.77 0 1115234..1118005 - 923 53712228 - BF0936 - putative beta-galactosidase 938 48.11 0 1118002..1121304 - 1100 53712229 - BF0937 - hypothetical protein 939 47.61 0 1121318..1122697 - 459 53712230 - BF0938 - xylose/H+ symporter 940 42.42 0 1122775..1123731 + 318 53712231 - BF0939 - transcriptional regulator 941 45.55 0 1123886..1126537 - 883 53712232 - BF0940 - beta-glucosidase 942 48.36 0 1126644..1128080 - 478 53712233 - BF0941 - hypothetical protein 943 40.46 0 1128092..1129621 - 509 53712234 - BF0942 - hypothetical protein 944 43.16 0 1129639..1131276 - 545 53712235 - BF0943 - hypothetical protein 945 40.63 0 1131298..1134615 - 1105 53712236 - BF0944 - hypothetical protein 946 40.66 0 1134926..1136686 - 586 53712237 - BF0945 - hypothetical protein 947 39.81 0 1136715..1140125 - 1136 53712238 - BF0946 - hypothetical protein 948 37.86 0 1140415..1142181 - 588 53712239 - BF0947 - hypothetical protein 949 37.20 -1 1142195..1145506 - 1103 53712240 - BF0948 - hypothetical protein 950 28.25 -2 1145824..1146000 - 58 53712241 - BF0949 - hypothetical protein 951 33.33 -1 1146395..1146970 + 191 53712242 - BF0950 - RNA polymerase ECF-type sigma factor 952 39.82 0 1147096..1148082 + 328 53712243 - BF0951 - putative anti-sigma factor 953 39.13 0 1148335..1151718 + 1127 53712244 - BF0952 - hypothetical protein 954 40.11 0 1151737..1153521 + 594 53712245 - BF0953 - hypothetical protein 955 36.91 -1 1154127..1155941 + 604 53712246 - BF0954 - hypothetical protein 956 47.42 0 1156038..1157315 - 425 53712247 - BF0955 - putative oxidoreductase 957 40.00 0 1157616..1158110 - 164 161936266 ribH BF0956 - riboflavin synthase subunit beta 958 44.30 0 1158196..1158879 - 227 53712249 - BF0957 - hypothetical protein 959 43.13 0 1159040..1160152 + 370 53712250 - BF0958 - DNA replication and repair protein RecF 960 45.70 0 1160149..1160439 + 96 53712251 - BF0959 - hypothetical protein 961 40.74 0 1160461..1160622 + 53 53712252 - BF0960 - hypothetical protein 962 44.87 0 1160562..1161350 - 262 53712253 - BF0961 - putative histidinol-phosphatase 963 45.95 0 1161347..1161877 - 176 53712254 - BF0962 - putative 5-formyltetrahydrofolate cyclo-ligase 964 47.16 0 1161807..1163534 - 575 53712255 - BF0963 - carboxy-terminal processing protease precursor 965 44.98 0 1163612..1164049 - 145 53712256 - BF0964 - deoxycytidylate deaminase 966 37.84 0 1164061..1164570 - 169 53712257 - BF0965 - hypothetical protein 967 45.58 0 1164577..1166634 - 685 53712258 - BF0966 - peptidyl-dipeptidase 968 42.91 0 1166858..1167859 - 333 53712259 - BF0967 - glyceraldehyde 3-phosphate dehydrogenase 969 42.40 0 1167999..1168439 + 146 53712260 - BF0968 - putative ion channel 970 47.11 0 1168470..1169993 + 507 53712261 guaA BF0969 - bifunctional GMP synthase/glutamine amidotransferase protein 971 46.67 0 1170598..1172622 - 674 53712262 - BF0970 - hypothetical protein 972 46.21 0 1172638..1175907 - 1089 53712263 - BF0971 - hypothetical protein 973 41.84 0 1176855..1177712 + 285 53712264 - BF0972 - enoyl-[acyl-carrier-protein] reductase 974 42.50 0 1177717..1178730 + 337 53712265 - BF0973 - hypothetical protein 975 45.39 0 1178757..1179461 + 234 53712266 - BF0974 - putative S-adenosylmethionine-dependent methytransferase 976 44.24 0 1179427..1180545 - 372 53712267 - BF0975 - hypothetical protein 977 48.67 0 1180610..1181476 - 288 53712268 - BF0976 - lipoyl synthase 978 46.72 0 1181603..1183813 - 736 53712269 - BF0977 - dipeptidyl peptidase IV 979 46.46 0 1183918..1184214 - 98 53712270 - BF0978 - hypothetical protein 980 45.82 0 1184251..1184979 + 242 53712271 - BF0979 - hypothetical protein 981 47.21 0 1184989..1185831 + 280 53712272 - BF0980 - putative two-component system response regulator 982 33.88 -1 1185923..1186105 + 60 53712273 - BF0981 - hypothetical protein 983 46.15 0 1186165..1187100 + 311 53712274 - BF0982 - hypothetical protein 984 43.75 0 1187220..1188419 + 399 53712275 - BF0983 - flavoprotein 985 45.51 0 1188459..1189271 + 270 53712276 nagB BF0984 - glucosamine-6-phosphate deaminase 986 39.67 0 1189365..1189790 - 141 53712277 - BF0985 - hypothetical protein 987 48.46 0 1189854..1190468 - 204 53712278 - BF0986 - hypothetical protein 988 45.27 0 1190516..1193029 - 837 53712279 - BF0987 - outer membrane assembly protein 989 47.73 0 1193267..1195267 - 666 53712280 - BF0988 - putative helicase 990 45.80 0 1195269..1196054 - 261 53712281 - BF0989 - hypothetical protein 991 45.91 0 1196226..1197410 + 394 53712282 - BF0990 - putative aminotransferase 992 46.12 0 1197442..1198677 + 411 53712283 - BF0991 - O-acetylhomoserine sulfhydrylase 993 40.03 0 1198703..1199284 + 193 53712284 - BF0992 - RNA polymerase ECF-type sigma factor 994 41.73 0 1199394..1200500 + 368 53712285 - BF0993 - putative anti-sigma factor 995 38.39 0 1200692..1201126 + 144 53712286 - BF0994 - hypothetical protein 996 40.32 0 1201139..1201882 - 247 53712287 - BF0995 - CRP family transcriptional regulator 997 39.36 0 1201998..1202594 + 198 53712288 - BF0996 - hypothetical protein 998 40.41 0 1202632..1203309 - 225 53712289 - BF0997 - hypothetical protein 999 42.66 0 1203480..1205420 + 646 53712290 - BF0998 - 4-alpha-glucanotransferase 1000 41.96 0 1205435..1206709 + 424 53712291 - BF0999 - putative glycosyltransferase 1001 41.40 0 1206722..1208110 + 462 53712292 - BF1000 - putative alpha-amylase 1002 39.77 0 1208496..1209986 - 496 53712293 - BF1001 - hypothetical protein 1003 42.28 0 1210010..1210702 - 230 53712294 - BF1002 - putative glycogen synthase 1004 43.46 0 1211081..1211929 + 282 53712295 - BF1003 - pantoate-beta-alanine ligase 1005 41.81 0 1211952..1212305 + 117 53712296 - BF1004 - aspartate alpha-decarboxylase 1006 48.01 0 1212488..1214776 - 762 53712297 - BF1005 - putative bifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta 1007 46.25 0 1214919..1216079 - 386 53712298 - BF1006 - glucose/galactose transporter 1008 46.20 0 1216330..1217604 - 424 53712299 - BF1007 - seryl-tRNA synthetase 1009 32.70 -1 1217640..1217798 - 52 53712300 - BF1008 - hypothetical protein 1010 43.33 0 1217761..1218030 - 89 53712301 rpmA BF1009 - 50S ribosomal protein L27 1011 40.88 0 1218053..1218370 - 105 53712302 rplU BF1010 - 50S ribosomal protein L21 1012 34.39 -1 1218411..1218599 - 62 53712303 - BF1011 - hypothetical protein 1013 44.00 0 1218626..1218925 - 99 53712304 - BF1012 - hypothetical protein 1014 41.67 0 1218981..1219136 - 51 53712305 - BF1013 - hypothetical protein 1015 46.19 0 1219150..1219818 - 222 53712306 - BF1014 - HPr(Ser) phosphatase 1016 49.03 +1 1219866..1220381 - 171 53712307 - BF1015 - putative lipoprotein 1017 42.09 0 1220386..1221093 - 235 53712308 - BF1016 - ATP-binding protein 1018 43.25 0 1221125..1222606 - 493 53712309 - BF1017 - hypothetical protein 1019 44.11 0 1222703..1225522 - 939 53712310 - BF1018 - putative zinc protease 1020 46.39 0 1225671..1226474 - 267 53712311 - BF1019 - 2-dehydro-3-deoxyphosphooctonate aldolase 1021 47.03 0 1226490..1227416 - 308 53712312 - BF1020 - hypothetical protein 1022 45.52 0 1227708..1228634 - 308 53712313 miaA BF1021 - tRNA delta(2)-isopentenylpyrophosphate transferase 1023 43.37 0 1228848..1230053 - 401 53712314 - BF1022 - hypothetical protein 1024 44.81 0 1230050..1230694 - 214 53712315 - BF1023 - ABC transporter ATP-binding protein 1025 41.06 0 1230707..1232260 - 517 53712316 - BF1024 - hypothetical protein 1026 43.91 0 1232288..1232977 - 229 53712317 - BF1025 - hypothetical protein 1027 44.91 0 1232983..1233552 - 189 53712318 - BF1026 - hypothetical protein 1028 43.97 0 1233555..1234814 - 419 53712319 - BF1027 - xanthosine permease 1029 38.89 0 1235478..1235639 - 53 53712320 - BF1028 - hypothetical protein 1030 36.01 -1 1235925..1237082 + 385 53712321 - BF1029 - hypothetical protein 43.19 MEAN 5.60 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0