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Bacteroides fragilis YCH46, complete genome - 1..5277274 4578 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3959 43.29 0 4520656..4521378 - 240 53715250 - BF3966 - putative biopolymer transport protein ExbB 3960 45.66 0 4521378..4522091 - 237 53715251 - BF3967 - pyridoxal phosphate biosynthetic protein PdxJ 3961 42.27 0 4522224..4523096 + 290 53715252 ppnK BF3968 - inorganic polyphosphate/ATP-NAD kinase 3962 37.74 0 4530582..4531148 + 188 53715253 - BF3969 - RNA polymerase ECF-type sigma factor 3963 40.56 0 4531222..4532190 + 322 53715254 - BF3970 - putative anti-sigma factor 3964 46.09 0 4532377..4535817 + 1146 53715255 - BF3971 - hypothetical protein 3965 45.25 0 4535840..4537459 + 539 53715256 - BF3972 - hypothetical protein 3966 43.20 0 4537497..4537871 + 124 53715257 - BF3973 - hypothetical protein 3967 46.74 0 4537879..4539915 + 678 53715258 - BF3974 - hypothetical protein 3968 42.36 0 4540011..4542203 - 730 53715259 - BF3975 - putative transcriptional regulator 3969 37.87 0 4542207..4542581 - 124 53715260 - BF3976 - putative transcriptional regulator 3970 44.01 0 4542796..4546083 - 1095 53715261 - BF3977 - putative Tricorn-like protease 3971 44.06 0 4546190..4547131 - 313 53715262 - BF3978 - malate dehydrogenase 3972 42.84 0 4547318..4548190 + 290 53715263 - BF3979 - hypothetical protein 3973 43.42 0 4548313..4549254 - 313 53715264 - BF3980 - putative anti-sigma factor 3974 45.41 0 4549235..4549789 - 184 53715265 - BF3981 - RNA polymerase ECF-type sigma factor 3975 40.54 0 4549829..4552396 - 855 53715266 - BF3982 - hypothetical protein 3976 29.01 -2 4552752..4552913 + 53 53715267 - BF3983 - hypothetical protein 3977 46.80 0 4552977..4554431 + 484 53715268 - BF3984 - putative alkaline protease AprF 3978 48.44 0 4554509..4555501 + 330 53715269 - BF3985 - hypothetical protein 3979 46.36 0 4555498..4556679 + 393 53715270 - BF3986 - hypothetical protein 3980 44.28 0 4556679..4557929 + 416 53715271 - BF3987 - hypothetical protein 3981 44.62 0 4558106..4560055 + 649 53715272 - BF3988 - putative alpha-glucosidase 3982 43.93 0 4560178..4560885 + 235 53715273 - BF3989 - hypothetical protein 3983 44.67 0 4560906..4561655 + 249 53715274 - BF3990 - hypothetical protein 3984 40.71 0 4561856..4562221 + 121 53715275 - BF3991 - transcriptional regulator 3985 46.25 0 4562242..4563975 + 577 53715276 - BF3992 - TonB 3986 46.74 0 4564018..4565919 + 633 53715277 - BF3993 - putative thiol:disulfide interchange protein DsbE 3987 49.50 +1 4566010..4567116 - 368 53715278 - BF3994 - Mrp/Nbp35 family ATP-binding protein 3988 43.87 0 4567125..4567883 - 252 53715279 trmB BF3995 - tRNA (guanine-N(7))-methyltransferase 3989 48.70 0 4567893..4568699 - 268 53715280 - BF3996 - putative metallo-beta-lactamase 3990 47.84 0 4568711..4569730 - 339 53715281 - BF3997 - branched-chain amino acid aminotransferase 3991 39.44 0 4569776..4569988 - 70 53715282 - BF3998 - hypothetical protein 3992 54.58 +2 4570084..4571316 - 410 53715283 xseA BF3999 - exodeoxyribonuclease VII large subunit 3993 52.06 +1 4571320..4572675 - 451 53715284 - BF4000 - subtilisin-like serine protease 3994 52.89 +1 4572703..4573791 - 362 53715285 - BF4001 - putative tRNA (5-methylaminomethyl-2-thiouridylate) methyltransferase 3995 38.70 0 4574542..4574802 + 86 53715286 - BF4002 - hypothetical protein 3996 49.36 +1 4574739..4575599 + 286 53715287 - BF4003 - hypothetical protein 3997 33.81 -1 4575671..4576516 - 281 53715288 - BF4004 - hypothetical protein 3998 40.44 0 4576739..4577329 + 196 53715289 - BF4005 - hypothetical protein 3999 45.00 0 4577469..4577948 - 159 53715290 - BF4006 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 4000 46.99 0 4577987..4578601 - 204 53715291 - BF4007 - 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase 4001 45.36 0 4578605..4579261 - 218 53715292 - BF4008 - redox-sensing transcriptional repressor Rex 4002 45.30 0 4579444..4579794 + 116 53715293 - BF4009 - putative translation initiation factor SUI1 4003 43.40 0 4579984..4580976 - 330 53715294 tsf BF4010 - elongation factor Ts 4004 42.05 0 4581100..4581936 - 278 53715295 rpsB BF4011 - 30S ribosomal protein S2 4005 43.93 0 4582057..4582443 - 128 53715296 rpsI BF4012 - 30S ribosomal protein S9 4006 40.48 0 4582450..4582911 - 153 53715297 rplM BF4013 - 50S ribosomal protein L13 4007 38.83 0 4582930..4583238 + 102 53715298 - BF4014 - hypothetical protein 4008 40.08 0 4583245..4583733 - 162 53715299 - BF4015 - hypothetical protein 4009 44.59 0 4583891..4585294 - 467 53715300 asnC BF4016 - asparaginyl-tRNA synthetase 4010 47.75 0 4585401..4586801 - 466 53715301 - BF4017 - ribosomal large subunit pseudouridine synthase B 4011 43.36 0 4586883..4588229 - 448 53715302 - BF4018 - adenylosuccinate lyase 4012 42.61 0 4588451..4590337 - 628 53715303 - BF4019 - beta-galactosidase precursor 4013 47.64 0 4591005..4591556 - 183 53715304 - BF4020 - putative maltose O-acetyltransferase 4014 44.87 0 4591563..4592342 - 259 53715305 - BF4021 - hypothetical protein 4015 46.31 0 4592458..4594677 + 739 53715306 - BF4022 - hyaluronoglucosaminidase precursor 4016 39.58 0 4594876..4595259 - 127 53715307 - BF4023 - hypothetical protein 4017 47.44 0 4595274..4596932 - 552 53715308 - BF4024 - hypothetical protein 4018 43.00 0 4596967..4599594 - 875 53715309 - BF4025 - hypothetical protein 4019 45.04 0 4599557..4601350 - 597 53715310 - BF4026 - hypothetical protein 4020 46.36 0 4601307..4602020 - 237 53715311 - BF4027 - hypothetical protein 4021 45.71 0 4602044..4603894 - 616 53715312 - BF4028 - hypothetical protein 4022 41.37 0 4603919..4604515 - 198 53715313 - BF4029 - hypothetical protein 4023 42.76 0 4604545..4605456 - 303 53715314 - BF4030 - hypothetical protein 4024 44.34 0 4605567..4606820 - 417 53715315 - BF4031 - hypothetical protein 4025 35.06 -1 4606840..4607013 - 57 53715316 - BF4032 - hypothetical protein 4026 42.43 0 4607214..4608158 - 314 53715317 - BF4033 - tyrosine type site-specific recombinase 4027 39.16 0 4608374..4608802 - 142 53715318 - BF4034 - hypothetical protein 4028 45.59 0 4609002..4612223 - 1073 53715319 - BF4035 - glutamine-dependent carbamyl phosphate synthetase 4029 47.99 0 4612547..4613638 + 363 53715320 - BF4036 - tryptophanyl-tRNA synthetase II 4030 45.88 0 4613744..4614931 - 395 53715321 - BF4037 - major outer membrane protein OmpA 4031 49.55 +1 4615101..4616420 - 439 53715322 - BF4038 - putative hemolysin secretion protein 4032 47.17 0 4616423..4618633 - 736 53715323 - BF4039 - ABC transporter ATP-binding protein 4033 42.33 0 4618669..4619268 - 199 53715324 - BF4040 - hypothetical protein 4034 38.89 0 4619281..4619946 - 221 53715325 - BF4041 - hypothetical protein 4035 45.26 0 4620014..4621120 - 368 53715326 - BF4042 - putative glycosyltransferase 4036 42.65 0 4621006..4621896 - 296 53715327 - BF4043 - putative alpha-1,3-fucosyltransferase 4037 47.64 0 4621946..4624420 - 824 53715328 - BF4044 - hypothetical protein 4038 47.62 0 4624432..4625103 - 223 53715329 - BF4045 - putative CMP-N-acetylneuraminic acid synthetase 4039 31.40 -2 4625117..4626358 - 413 53715330 - BF4046 - hypothetical protein 4040 32.05 -1 4626372..4627619 - 415 53715331 - BF4047 - putative Fe-S oxidoreductase 4041 31.06 -2 4627623..4628942 - 439 53715332 - BF4048 - putative transcriptional regulator 4042 33.49 -1 4628973..4630229 - 418 53715333 - BF4049 - hypothetical protein 4043 42.63 0 4630352..4630663 - 103 53715334 - BF4050 - hypothetical protein 4044 32.04 -1 4630807..4632045 - 412 53715335 - BF4051 - hypothetical protein 4045 41.50 0 4632109..4632402 - 97 53715336 - BF4052 - hypothetical protein 4046 32.20 -1 4632681..4633910 - 409 53715337 - BF4053 - glycosyltransferase 4047 35.06 -1 4633907..4634602 - 231 53715338 - BF4054 - hypothetical protein 4048 35.94 -1 4634571..4635338 - 255 53715339 - BF4055 - hypothetical protein 4049 36.47 -1 4635335..4635940 - 201 53715340 - BF4056 - hypothetical protein 4050 36.90 -1 4635955..4636431 - 158 53715341 - BF4057 - hypothetical protein 4051 37.82 0 4636523..4638307 - 594 53715342 - BF4058 - hypothetical protein 4052 29.41 -2 4638384..4638536 - 50 53715343 - BF4059 - hypothetical protein 4053 40.85 0 4638688..4639206 + 172 53715344 - BF4060 - transposase 4054 28.62 -2 4639330..4639626 + 98 53715345 - BF4061 - hypothetical protein 4055 38.10 0 4639795..4641012 - 405 53715346 - BF4062 - hypothetical protein 4056 36.78 -1 4641240..4642514 - 424 53715347 - BF4063 - hypothetical protein 4057 38.71 0 4642628..4643872 - 414 53715348 - BF4064 - hypothetical protein 4058 36.49 -1 4643897..4645162 - 421 53715349 - BF4065 - hypothetical protein 43.19 MEAN 5.60 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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