version 1.0
Bacteroides fragilis YCH46, complete genome - 1..5277274 4578 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3636 37.35 -1 4156704..4157897 + 397 53714927 - BF3642 - hypothetical protein 3637 44.44 0 4158531..4158971 - 146 53714928 - BF3643 - putative DNA-binding protein 3638 36.32 -1 4159452..4160321 - 289 53714929 - BF3644 - hypothetical protein 3639 41.05 0 4160312..4160881 - 189 53714930 - BF3645 - hypothetical protein 3640 45.05 0 4161194..4161910 - 238 53714931 - BF3646 - putative capsular polysaccharide biosynthesis protein 3641 37.07 -1 4161918..4162907 - 329 53714932 - BF3647 - putative UDP-galactose 4-epimerase 3642 32.17 -1 4162904..4163677 - 257 53714933 - BF3648 - putative glycosyltransferase 3643 31.48 -2 4163664..4164686 - 340 53714934 - BF3649 - putative glycosyltransferase 3644 28.37 -2 4164745..4165590 - 281 53714935 - BF3650 - glycosyltransferase 3645 26.85 -2 4165593..4166672 - 359 53714936 - BF3651 - putative O-antigen polymerase 3646 32.36 -1 4166669..4167385 - 238 53714937 - BF3652 - putative glycosyltransferase 3647 32.70 -1 4167382..4168008 - 208 53714938 - BF3653 - putative O-acetyltransferase 3648 30.01 -2 4168005..4169057 - 350 53714939 - BF3654 - putative glycosyltransferase 3649 34.31 -1 4169137..4170366 - 409 53714940 - BF3655 - putative glycosyltransferase 3650 35.58 -1 4170314..4171468 - 384 53714941 - BF3656 - UDP-GlcNAc 2-epimerase 3651 27.52 -2 4171493..4172473 - 326 53714942 - BF3657 - putative glycosyltransferase 3652 31.77 -2 4172494..4173963 - 489 53714943 - BF3658 - putative flippase 3653 35.25 -1 4174009..4175106 - 365 53714944 - BF3659 - putative aminotransferase 3654 30.92 -2 4175091..4176293 - 400 53714945 - BF3660 - hypothetical protein 3655 35.62 -1 4176265..4176702 - 145 53714946 - BF3661 - hypothetical protein 3656 36.08 -1 4176702..4177247 - 181 53714947 - BF3662 - hypothetical protein 3657 33.09 -1 4177249..4177656 - 135 53714948 - BF3663 - hypothetical protein 3658 39.26 0 4177646..4178539 - 297 53714949 - BF3664 - glucose-1-phosphate thymidylyltransferase 3659 49.73 +1 4178541..4179638 - 365 53714950 - BF3665 - undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase 3660 51.44 +1 4179690..4180175 - 161 53714951 - BF3666 - hypothetical protein 3661 51.67 +1 4180220..4180846 - 208 53714952 - BF3667 - putative transcriptional regulator UpxY-like protein 3662 27.78 -2 4181345..4181506 - 53 53714953 - BF3668 - hypothetical protein 3663 38.58 0 4181505..4181885 + 126 53714954 - BF3669 - hypothetical protein 3664 51.99 +1 4181951..4184110 + 719 53714955 - BF3670 - hypothetical protein 3665 35.56 -1 4184064..4184288 - 74 53714956 - BF3671 - hypothetical protein 3666 34.53 -1 4184413..4185165 + 250 53714957 - BF3672 - hypothetical protein 3667 36.89 -1 4185512..4185820 - 102 53714958 - BF3673 - hypothetical protein 3668 44.57 0 4185817..4186074 - 85 53714959 - BF3674 - hypothetical protein 3669 45.93 0 4186472..4186717 - 81 53714960 - BF3675 - hypothetical protein 3670 45.22 0 4186985..4187455 + 156 53714961 - BF3676 - putative non-specific DNA binding protein 3671 47.72 0 4187669..4188370 - 233 53714962 - BF3677 - putative ribose 5-phosphate isomerase 3672 48.37 0 4188400..4188552 - 50 53714963 - BF3678 - hypothetical protein 3673 47.26 0 4188521..4189525 - 334 53714964 - BF3679 - hypothetical protein 3674 48.80 +1 4189909..4190406 - 165 53714965 - BF3680 - hypothetical protein 3675 42.82 0 4190538..4191833 + 431 53714966 - BF3681 - C-5 cytosine-specific DNA-methylase 3676 41.31 0 4191839..4193029 + 396 53714967 - BF3682 - type II restriction endonuclease 3677 49.42 +1 4193031..4193546 - 171 53714968 - BF3683 - putative very-short-patch-repair endonuclease 3678 46.78 0 4193788..4193958 + 56 53714969 - BF3684 - hypothetical protein 3679 48.13 0 4194399..4194932 + 177 53714970 - BF3685 - putative acetyltransferase 3680 32.20 -1 4195090..4195443 + 117 53714971 - BF3686 - putative transcriptional regulator 3681 38.48 0 4195430..4196167 + 245 53714972 - BF3687 - putative transcriptional regulator 3682 34.29 -1 4196130..4196654 + 174 53714973 - BF3688 - hypothetical protein 3683 47.52 0 4196791..4197396 - 201 53714974 ruvA BF3689 - Holliday junction DNA helicase motor protein 3684 50.33 +1 4197555..4198454 + 299 53714975 - BF3690 - meso-diaminopimelate D-dehydrogenase 3685 52.38 +1 4198596..4199246 + 216 53714976 - BF3691 - hemolysin III 3686 47.54 0 4199587..4201980 + 797 53714977 - BF3692 - anaerobic ribonucleoside triphosphate reductase 3687 49.02 +1 4201987..4202445 + 152 53714978 - BF3693 - anaerobic ribonucleoside-triphosphate reductase activating protein 3688 50.04 +1 4202680..4204086 + 468 53714979 - BF3694 - putative transport protein 3689 46.46 0 4204251..4205339 - 362 53714980 - BF3695 - 2-aminoethylphosphonate--pyruvate transaminase 3690 49.49 +1 4205345..4206136 - 263 53714981 - BF3696 - phosphonoacetaldehyde hydrolase 3691 44.71 0 4206333..4207211 + 292 53714982 - BF3697 - hypothetical protein 3692 44.47 0 4207338..4208693 - 451 53714983 - BF3698 - membrane-associated zinc metalloprotease 3693 48.33 0 4208713..4209879 - 388 53714984 - BF3699 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 3694 44.48 0 4209882..4210742 - 286 53714985 - BF3700 - putative membrane peptidase 3695 45.86 0 4210808..4211350 - 180 53714986 rimM BF3701 - 16S rRNA-processing protein 3696 47.66 0 4211347..4212651 - 434 53714987 - BF3702 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 3697 41.75 0 4212699..4213316 - 205 53714988 - BF3703 - hypothetical protein 3698 46.23 0 4213368..4214057 - 229 53714989 - BF3704 - putative glycoprotease 3699 36.33 -1 4214785..4215084 + 99 53714990 - BF3705 - hypothetical protein 3700 44.60 0 4215081..4215959 + 292 53714991 - BF3706 - hypothetical protein 3701 45.04 0 4215972..4216586 + 204 53714992 gmk BF3707 - guanylate kinase 3702 46.20 0 4216620..4217225 + 201 53714993 nadD BF3708 - nicotinic acid mononucleotide adenylyltransferase 3703 47.10 0 4217229..4218281 - 350 53714994 - BF3709 - putative phosphohydrolase 3704 46.93 0 4218381..4219277 + 298 53714995 - BF3710 - 1,4-dihydroxy-2-naphthoate octaprenyltransferase 3705 44.47 0 4219282..4220421 - 379 53714996 - BF3711 - dTDP-glucose 4,6-dehydratase 3706 46.06 0 4220441..4221304 - 287 53714997 - BF3712 - glucose-1-phosphate thymidylyltransferase 3707 44.92 0 4221481..4221972 - 163 53714998 - BF3713 - putative phosphoesterase 3708 44.46 0 4222029..4224104 + 691 53714999 - BF3714 - polyphosphate kinase 3709 46.22 0 4224170..4226419 + 749 53715000 - BF3715 - putative phosphate/sulphate permeases 3710 41.85 0 4226584..4226982 - 132 53715001 - BF3716 - two-component system response regulator 3711 46.73 0 4227092..4228726 + 544 53715002 - BF3717 - putative ABC transporter ATP-binding protein 3712 38.77 0 4228845..4229120 + 91 53715003 - BF3718 - hypothetical protein 3713 33.95 -1 4229214..4229375 - 53 53715004 - BF3719 - hypothetical protein 3714 46.91 0 4229356..4229760 + 134 53715005 - BF3720 - hypothetical protein 3715 49.01 +1 4229932..4231149 + 405 53715006 - BF3721 - cation efflux system protein 3716 50.34 +1 4231208..4234294 + 1028 53715007 - BF3722 - AcrB/AcrD/AcrF family cation efflux system protein 3717 47.41 0 4234314..4235492 + 392 53715008 - BF3723 - hypothetical protein 3718 49.66 +1 4235656..4236696 - 346 53715009 - BF3724 - hypothetical protein 3719 46.27 0 4236762..4237511 - 249 53715010 - BF3725 - hypothetical protein 3720 49.89 +1 4237547..4238965 - 472 53715011 - BF3726 - tRNA and rRNA cytosine-C5-methylase 3721 39.53 0 4238962..4239219 - 85 53715012 - BF3727 - hypothetical protein 3722 46.76 0 4239167..4239382 - 71 53715013 - BF3728 - hypothetical protein 3723 47.37 0 4239651..4240277 + 208 53715014 - BF3730 - hypothetical protein 3724 43.90 0 4240277..4240825 + 182 53715015 - BF3731 - RNA polymerase ECF-type sigma factor 3725 53.03 +1 4240809..4241138 + 109 53715016 - BF3732 - hypothetical protein 3726 47.03 0 4241693..4242889 + 398 53715017 - BF3733 - putative cardiolipin synthetase 3727 49.56 +1 4242955..4243749 + 264 53715018 thyA BF3734 - thymidylate synthase 3728 49.70 +1 4243764..4244264 + 166 53715019 - BF3735 - dihydrofolate reductase 3729 44.65 0 4244261..4244737 - 158 53715020 - BF3736 - transcriptional regulator 3730 47.62 0 4244888..4246168 + 426 53715021 - BF3737 - hypothetical protein 3731 40.88 0 4246369..4246527 - 52 53715022 - BF3738 - hypothetical protein 3732 39.78 0 4246673..4247137 - 154 53715023 - BF3739 - hypothetical protein 3733 38.58 0 4247137..4247727 - 196 53715024 - BF3740 - hypothetical protein 3734 38.64 0 4247764..4248234 - 156 53715025 - BF3741 - hypothetical protein 3735 41.61 0 4248241..4249062 - 273 53715026 - BF3742 - putative biopolymer transport protein 43.19 MEAN 5.60 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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