version 1.0
Bacteroides fragilis YCH46, complete genome - 1..5277274 4578 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3598 41.50 0 4112606..4112899 - 97 53714889 - BF3604 - hypothetical protein 3599 49.45 +1 4113239..4115527 + 762 53714890 - BF3605 - malic enzyme 3600 36.16 -1 4115524..4115700 + 58 53714891 - BF3606 - hypothetical protein 3601 48.09 0 4115865..4117199 + 444 53714892 - BF3607 - glutamate dehydrogenase 3602 46.30 0 4117344..4117505 + 53 53714893 - BF3608 - hypothetical protein 3603 39.26 0 4117851..4118390 + 179 53714894 - BF3609 - RNA polymerase ECF-type sigma factor 3604 46.46 0 4118437..4119426 + 329 53714895 - BF3610 - putative anti-sigma factor 3605 46.64 0 4119607..4122876 + 1089 53714896 - BF3611 - hypothetical protein 3606 49.85 +1 4122897..4124525 + 542 53714897 - BF3612 - hypothetical protein 3607 47.09 0 4124551..4125597 + 348 53714898 - BF3613 - putative endo-beta-N-acetylglucosaminidase 3608 48.82 +1 4125621..4126802 + 393 53714899 - BF3614 - hypothetical protein 3609 42.44 0 4126815..4127846 + 343 53714900 - BF3615 - hypothetical protein 3610 42.06 0 4128015..4128335 - 106 53714901 - BF3616 - hypothetical protein 3611 42.27 0 4128535..4128993 + 152 53714902 - BF3617 - putative transcriptional regulator 3612 35.44 -1 4129252..4129536 + 94 53714903 - BF3618 - hypothetical protein 3613 36.97 -1 4129757..4130113 + 118 53714904 - BF3619 - hypothetical protein 3614 34.36 -1 4130123..4130317 - 64 53714905 - BF3620 - hypothetical protein 3615 42.59 0 4130367..4130528 + 53 53714906 - BF3621 - hypothetical protein 3616 38.31 0 4130748..4130948 + 66 53714907 - BF3622 - hypothetical protein 3617 36.29 -1 4131011..4131517 - 168 53714908 - BF3623 - hypothetical protein 3618 39.15 0 4131524..4132744 - 406 53714909 - BF3624 - hypothetical protein 3619 40.52 0 4132998..4133150 - 50 53714910 - BF3625 - hypothetical protein 3620 48.23 0 4133255..4133932 - 225 53714911 - BF3626 - hypothetical protein 3621 43.41 0 4133935..4136067 - 710 53714912 - BF3627 - hypothetical protein 3622 47.49 0 4136079..4137689 - 536 53714913 - BF3628 - hypothetical protein 3623 44.08 0 4137710..4138435 - 241 53714914 - BF3629 - hypothetical protein 3624 42.55 0 4138446..4140236 - 596 53714915 - BF3630 - hypothetical protein 3625 42.06 0 4140249..4141577 - 442 53714916 - BF3631 - hypothetical protein 3626 44.07 0 4141598..4142407 - 269 53714917 - BF3632 - hypothetical protein 3627 45.15 0 4142631..4145600 - 989 53714918 - BF3633 - phosphoenolpyruvate synthase 3628 41.07 0 4145698..4145865 + 55 53714919 - BF3634 - hypothetical protein 3629 46.79 0 4146015..4147352 + 445 53714920 - BF3635 - glutamate dehydrogenase 3630 45.53 0 4147523..4148686 + 387 53714921 - BF3636 - putative Xaa-Pro dipeptidase 3631 45.53 0 4148848..4151610 - 920 53714922 - BF3637 - hypothetical protein 3632 43.22 0 4151614..4153707 - 697 53714923 - BF3638 - hypothetical protein 3633 30.85 -2 4153741..4153941 - 66 53714924 - BF3639 - hypothetical protein 3634 47.10 0 4153981..4155426 - 481 53714925 - BF3640 - tRNA nucleotidyltransferase 3635 45.91 0 4155599..4156441 + 280 53714926 - BF3641 - hypothetical protein 3636 37.35 -1 4156704..4157897 + 397 53714927 - BF3642 - hypothetical protein 3637 44.44 0 4158531..4158971 - 146 53714928 - BF3643 - putative DNA-binding protein 3638 36.32 -1 4159452..4160321 - 289 53714929 - BF3644 - hypothetical protein 3639 41.05 0 4160312..4160881 - 189 53714930 - BF3645 - hypothetical protein 3640 45.05 0 4161194..4161910 - 238 53714931 - BF3646 - putative capsular polysaccharide biosynthesis protein 3641 37.07 -1 4161918..4162907 - 329 53714932 - BF3647 - putative UDP-galactose 4-epimerase 3642 32.17 -1 4162904..4163677 - 257 53714933 - BF3648 - putative glycosyltransferase 3643 31.48 -2 4163664..4164686 - 340 53714934 - BF3649 - putative glycosyltransferase 3644 28.37 -2 4164745..4165590 - 281 53714935 - BF3650 - glycosyltransferase 3645 26.85 -2 4165593..4166672 - 359 53714936 - BF3651 - putative O-antigen polymerase 3646 32.36 -1 4166669..4167385 - 238 53714937 - BF3652 - putative glycosyltransferase 3647 32.70 -1 4167382..4168008 - 208 53714938 - BF3653 - putative O-acetyltransferase 3648 30.01 -2 4168005..4169057 - 350 53714939 - BF3654 - putative glycosyltransferase 3649 34.31 -1 4169137..4170366 - 409 53714940 - BF3655 - putative glycosyltransferase 3650 35.58 -1 4170314..4171468 - 384 53714941 - BF3656 - UDP-GlcNAc 2-epimerase 3651 27.52 -2 4171493..4172473 - 326 53714942 - BF3657 - putative glycosyltransferase 3652 31.77 -2 4172494..4173963 - 489 53714943 - BF3658 - putative flippase 3653 35.25 -1 4174009..4175106 - 365 53714944 - BF3659 - putative aminotransferase 3654 30.92 -2 4175091..4176293 - 400 53714945 - BF3660 - hypothetical protein 3655 35.62 -1 4176265..4176702 - 145 53714946 - BF3661 - hypothetical protein 3656 36.08 -1 4176702..4177247 - 181 53714947 - BF3662 - hypothetical protein 3657 33.09 -1 4177249..4177656 - 135 53714948 - BF3663 - hypothetical protein 3658 39.26 0 4177646..4178539 - 297 53714949 - BF3664 - glucose-1-phosphate thymidylyltransferase 3659 49.73 +1 4178541..4179638 - 365 53714950 - BF3665 - undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase 3660 51.44 +1 4179690..4180175 - 161 53714951 - BF3666 - hypothetical protein 3661 51.67 +1 4180220..4180846 - 208 53714952 - BF3667 - putative transcriptional regulator UpxY-like protein 3662 27.78 -2 4181345..4181506 - 53 53714953 - BF3668 - hypothetical protein 3663 38.58 0 4181505..4181885 + 126 53714954 - BF3669 - hypothetical protein 3664 51.99 +1 4181951..4184110 + 719 53714955 - BF3670 - hypothetical protein 3665 35.56 -1 4184064..4184288 - 74 53714956 - BF3671 - hypothetical protein 3666 34.53 -1 4184413..4185165 + 250 53714957 - BF3672 - hypothetical protein 3667 36.89 -1 4185512..4185820 - 102 53714958 - BF3673 - hypothetical protein 3668 44.57 0 4185817..4186074 - 85 53714959 - BF3674 - hypothetical protein 3669 45.93 0 4186472..4186717 - 81 53714960 - BF3675 - hypothetical protein 3670 45.22 0 4186985..4187455 + 156 53714961 - BF3676 - putative non-specific DNA binding protein 3671 47.72 0 4187669..4188370 - 233 53714962 - BF3677 - putative ribose 5-phosphate isomerase 3672 48.37 0 4188400..4188552 - 50 53714963 - BF3678 - hypothetical protein 3673 47.26 0 4188521..4189525 - 334 53714964 - BF3679 - hypothetical protein 3674 48.80 +1 4189909..4190406 - 165 53714965 - BF3680 - hypothetical protein 3675 42.82 0 4190538..4191833 + 431 53714966 - BF3681 - C-5 cytosine-specific DNA-methylase 3676 41.31 0 4191839..4193029 + 396 53714967 - BF3682 - type II restriction endonuclease 3677 49.42 +1 4193031..4193546 - 171 53714968 - BF3683 - putative very-short-patch-repair endonuclease 3678 46.78 0 4193788..4193958 + 56 53714969 - BF3684 - hypothetical protein 3679 48.13 0 4194399..4194932 + 177 53714970 - BF3685 - putative acetyltransferase 3680 32.20 -1 4195090..4195443 + 117 53714971 - BF3686 - putative transcriptional regulator 3681 38.48 0 4195430..4196167 + 245 53714972 - BF3687 - putative transcriptional regulator 3682 34.29 -1 4196130..4196654 + 174 53714973 - BF3688 - hypothetical protein 3683 47.52 0 4196791..4197396 - 201 53714974 ruvA BF3689 - Holliday junction DNA helicase motor protein 3684 50.33 +1 4197555..4198454 + 299 53714975 - BF3690 - meso-diaminopimelate D-dehydrogenase 3685 52.38 +1 4198596..4199246 + 216 53714976 - BF3691 - hemolysin III 3686 47.54 0 4199587..4201980 + 797 53714977 - BF3692 - anaerobic ribonucleoside triphosphate reductase 3687 49.02 +1 4201987..4202445 + 152 53714978 - BF3693 - anaerobic ribonucleoside-triphosphate reductase activating protein 3688 50.04 +1 4202680..4204086 + 468 53714979 - BF3694 - putative transport protein 3689 46.46 0 4204251..4205339 - 362 53714980 - BF3695 - 2-aminoethylphosphonate--pyruvate transaminase 3690 49.49 +1 4205345..4206136 - 263 53714981 - BF3696 - phosphonoacetaldehyde hydrolase 3691 44.71 0 4206333..4207211 + 292 53714982 - BF3697 - hypothetical protein 3692 44.47 0 4207338..4208693 - 451 53714983 - BF3698 - membrane-associated zinc metalloprotease 3693 48.33 0 4208713..4209879 - 388 53714984 - BF3699 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 3694 44.48 0 4209882..4210742 - 286 53714985 - BF3700 - putative membrane peptidase 3695 45.86 0 4210808..4211350 - 180 53714986 rimM BF3701 - 16S rRNA-processing protein 3696 47.66 0 4211347..4212651 - 434 53714987 - BF3702 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 3697 41.75 0 4212699..4213316 - 205 53714988 - BF3703 - hypothetical protein 43.19 MEAN 5.60 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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