version 1.0
Bacteroides fragilis YCH46, complete genome - 1..5277274 4578 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3520 29.63 -2 4032358..4032519 + 53 53714811 - BF3526 - hypothetical protein 3521 46.71 0 4032976..4035240 - 754 53714812 - BF3527 - putative Na+/H+ antiporter 3522 40.90 0 4035249..4035605 + 118 53714813 - BF3528 - hypothetical protein 3523 51.16 +1 4035781..4037295 + 504 53714814 - BF3529 - pyruvate carboxylase subunit A 3524 49.70 +1 4037300..4037800 + 166 53714815 - BF3530 - putative methylmalonyl-CoA decarboxylase biotin carboxyl carrier subunit 3525 52.80 +1 4037820..4039355 + 511 53714816 - BF3531 - propionyl-CoA carboxylase beta chain 3526 49.40 +1 4039460..4040131 - 223 53714817 - BF3532 - putative isochorismatase 3527 41.67 0 4040147..4040386 - 79 53714818 - BF3533 - hypothetical protein 3528 51.30 +1 4040529..4042142 + 537 53714819 - BF3534 - putative peptidase 3529 37.65 0 4042219..4042380 - 53 53714820 - BF3535 - hypothetical protein 3530 49.40 +1 4042538..4044031 - 497 53714821 - BF3536 - inositol-5-monophosphate dehydrogenase 3531 44.79 0 4044262..4044549 - 95 53714822 - BF3537 - hypothetical protein 3532 44.14 0 4044739..4044960 + 73 53714823 - BF3538 - hypothetical protein 3533 46.11 0 4044985..4045563 - 192 53714824 - BF3539 - transcriptional regulator 3534 45.90 0 4045648..4045830 - 60 53714825 - BF3540 - transcriptional regulator 3535 52.13 +1 4045981..4046895 + 304 53714826 - BF3541 - multidrug efflux protein 3536 50.90 +1 4046810..4047088 + 92 53714827 - BF3542 - multidrug efflux protein 3537 51.61 +1 4047171..4050377 + 1068 53714828 - BF3543 - AcrB/AcrD family multidrug resistance protein 3538 55.32 +2 4050388..4051815 + 475 53714829 - BF3544 - multidrug efflux pump channel protein 3539 51.60 +1 4051964..4053244 - 426 53714830 - BF3545 - O-acetylhomoserine (thiol)-lyase 3540 52.93 +1 4053414..4054454 + 346 53714831 - BF3546 - putative N-acetylmuramoyl-L-alanine amidase 3541 53.29 +1 4054582..4055538 + 318 53714832 - BF3547 - putative homocysteine S-methyltransferase 3542 53.61 +1 4055586..4056581 - 331 53714833 - BF3548 - hypothetical protein 3543 53.41 +1 4056738..4057001 + 87 53714834 - BF3549 - hypothetical protein 3544 46.74 0 4057103..4057378 + 91 53714835 - BF3550 - hypothetical protein 3545 46.44 0 4057673..4058107 + 144 53714836 - BF3551 - hypothetical protein 3546 42.93 0 4058176..4058373 + 65 53714837 - BF3552 - hypothetical protein 3547 37.36 -1 4058495..4058668 + 57 53714838 - BF3553 - hypothetical protein 3548 36.22 -1 4058599..4058910 - 103 53714839 - BF3554 - hypothetical protein 3549 43.23 0 4058909..4061221 + 770 53714840 - BF3555 - putative ABC-transporter permease protein 3550 43.39 0 4061296..4061484 - 62 53714841 - BF3556 - hypothetical protein 3551 50.66 +1 4061511..4062197 - 228 53714842 - BF3557 - haloacid dehalogenase-like family hydrolase 3552 52.58 +1 4062386..4063258 + 290 53714843 - BF3558 - hypothetical protein 3553 52.05 +1 4063290..4064165 + 291 53714844 - BF3559 - hypothetical protein 3554 49.68 +1 4064166..4064954 - 262 53714845 - BF3560 - hypothetical protein 3555 53.73 +1 4065301..4066947 - 548 53714846 - BF3561 - putative cation efflux system transmembrane protein 3556 52.59 +1 4066979..4068484 - 501 53714847 - BF3562 - hypothetical protein 3557 48.74 0 4068664..4072422 - 1252 53714848 - BF3563 - putative cation efflux system transmembrane protein 3558 44.10 0 4072615..4073004 - 129 53714849 - BF3564 - hypothetical protein 3559 45.69 0 4073069..4074112 + 347 53714850 - BF3565 - putative membrane-bound lytic murein transglycosylase 3560 43.00 0 4074157..4075056 + 299 53714851 - BF3566 - voltage-gated K+ channel protein 3561 42.46 0 4075046..4080919 - 1957 53714852 - BF3567 - putative DNA helicase 3562 33.60 -1 4081038..4081409 - 123 53714853 - BF3568 - hypothetical protein 3563 42.75 0 4081634..4082302 + 222 53714854 - BF3569 - hypothetical protein 3564 41.18 0 4082305..4083120 - 271 53714855 - BF3570 - hypothetical protein 3565 43.76 0 4083086..4084351 - 421 53714856 - BF3571 - hypothetical protein 3566 40.67 0 4084348..4085247 - 299 53714857 - BF3572 - putative transcriptional regulator 3567 40.79 0 4085419..4086504 + 361 53714858 - BF3573 - bifunctional methionine sulfoxide reductase A/B protein 3568 35.59 -1 4086668..4086844 - 58 53714859 - BF3574 - hypothetical protein 3569 43.30 0 4086993..4087634 + 213 53714860 - BF3575 - putative ATP-dependent DNA helicase 3570 45.29 0 4087670..4089049 + 459 53714861 - BF3576 - amino acid carrier protein 3571 41.78 0 4089150..4089788 + 212 53714862 - BF3577 - hypothetical protein 3572 44.24 0 4089922..4092021 + 699 53714863 - BF3578 - hypothetical protein 3573 43.74 0 4092112..4093437 - 441 53714864 - BF3579 - putative purine permease 3574 40.96 0 4093444..4094151 - 235 53714865 - BF3580 - hypothetical protein 3575 40.40 0 4094194..4094391 + 65 53714866 - BF3581 - hypothetical protein 3576 47.44 0 4094360..4094848 + 162 53714867 - BF3582 - hypothetical protein 3577 41.81 0 4094851..4095204 + 117 53714868 - BF3583 - arsenate reductase 3578 46.92 0 4095393..4096562 - 389 53714869 - BF3584 - hypothetical protein 3579 38.72 0 4096559..4097134 - 191 53714870 - BF3585 - RNA polymerase ECF-type sigma factor 3580 40.77 0 4097135..4097806 - 223 53714871 - BF3586 - putative acyltransferase 3581 44.51 0 4097816..4098772 - 318 53714872 - BF3587 - phosphatidate cytidylyltransferase 3582 45.36 0 4098769..4099425 - 218 53714873 - BF3588 - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase-related protein 3583 44.35 0 4099616..4101448 + 610 53714874 - BF3589 - putative outer membrane protein 3584 42.86 0 4101651..4101965 + 104 53714875 - BF3590 - hypothetical protein 3585 46.05 0 4102166..4103038 - 290 53714876 - BF3591 - pyridoxamine kinase 3586 44.39 0 4103109..4103687 - 192 53714877 - BF3592 - hypothetical protein 3587 46.75 0 4103684..4105069 - 461 53714878 - BF3593 - putative electron transport protein 3588 44.94 0 4105066..4105806 - 246 53714879 - BF3594 - putative glycolate oxidase 3589 42.86 0 4105939..4106484 - 181 53714880 - BF3595 - hypothetical protein 3590 43.24 0 4106471..4106803 - 110 53714881 - BF3596 - 6-pyruvoyl-tetrahydropterin synthase 3591 43.53 0 4106920..4107282 + 120 53714882 - BF3597 - hypothetical protein 3592 44.97 0 4107249..4107815 - 188 53714883 - BF3598 - putative MTA/SAH nucleosidase 3593 43.16 0 4107968..4109137 + 389 53714884 - BF3599 - hypothetical protein 3594 45.13 0 4109215..4109697 - 160 53714885 - BF3600 - hypothetical protein 3595 49.21 +1 4109807..4110562 - 251 53714886 - BF3601 - Cu2+ homeostasis protein CutC 3596 46.42 0 4110653..4112188 - 511 53714887 - BF3602 - phosphodiesterase 3597 42.86 0 4112297..4112590 - 97 53714888 - BF3603 - hypothetical protein 3598 41.50 0 4112606..4112899 - 97 53714889 - BF3604 - hypothetical protein 3599 49.45 +1 4113239..4115527 + 762 53714890 - BF3605 - malic enzyme 3600 36.16 -1 4115524..4115700 + 58 53714891 - BF3606 - hypothetical protein 3601 48.09 0 4115865..4117199 + 444 53714892 - BF3607 - glutamate dehydrogenase 3602 46.30 0 4117344..4117505 + 53 53714893 - BF3608 - hypothetical protein 3603 39.26 0 4117851..4118390 + 179 53714894 - BF3609 - RNA polymerase ECF-type sigma factor 3604 46.46 0 4118437..4119426 + 329 53714895 - BF3610 - putative anti-sigma factor 3605 46.64 0 4119607..4122876 + 1089 53714896 - BF3611 - hypothetical protein 3606 49.85 +1 4122897..4124525 + 542 53714897 - BF3612 - hypothetical protein 3607 47.09 0 4124551..4125597 + 348 53714898 - BF3613 - putative endo-beta-N-acetylglucosaminidase 3608 48.82 +1 4125621..4126802 + 393 53714899 - BF3614 - hypothetical protein 3609 42.44 0 4126815..4127846 + 343 53714900 - BF3615 - hypothetical protein 3610 42.06 0 4128015..4128335 - 106 53714901 - BF3616 - hypothetical protein 3611 42.27 0 4128535..4128993 + 152 53714902 - BF3617 - putative transcriptional regulator 3612 35.44 -1 4129252..4129536 + 94 53714903 - BF3618 - hypothetical protein 3613 36.97 -1 4129757..4130113 + 118 53714904 - BF3619 - hypothetical protein 3614 34.36 -1 4130123..4130317 - 64 53714905 - BF3620 - hypothetical protein 3615 42.59 0 4130367..4130528 + 53 53714906 - BF3621 - hypothetical protein 3616 38.31 0 4130748..4130948 + 66 53714907 - BF3622 - hypothetical protein 3617 36.29 -1 4131011..4131517 - 168 53714908 - BF3623 - hypothetical protein 3618 39.15 0 4131524..4132744 - 406 53714909 - BF3624 - hypothetical protein 3619 40.52 0 4132998..4133150 - 50 53714910 - BF3625 - hypothetical protein 43.19 MEAN 5.60 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0