version 1.0
Bacteroides fragilis YCH46, complete genome - 1..5277274 4578 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2213 42.73 0 2582238..2584409 + 723 53713504 - BF2215 - hypothetical protein 2214 43.11 0 2584413..2585363 - 316 53713505 - BF2216 - hypothetical protein 2215 31.52 -2 2585392..2585556 - 54 53713506 - BF2217 - hypothetical protein 2216 44.84 0 2585584..2587668 - 694 53713507 - BF2218 - putative outer membrane protein involved in nutrient binding 2217 45.32 0 2587685..2590954 - 1089 53713508 - BF2219 - putative outer membrane protein involved in nutrient binding 2218 44.99 0 2591291..2591779 + 162 53713509 - BF2220 - hypothetical protein 2219 39.95 0 2591867..2593195 - 442 53713510 - BF2221 - hypothetical protein 2220 39.40 0 2593110..2594411 - 433 53713511 - BF2222 - hypothetical protein 2221 38.51 0 2594408..2595238 - 276 53713512 - BF2223 - 3-deoxy-manno-octulosonate cytidylyltransferase 2222 38.46 0 2595362..2595517 + 51 53713513 - BF2224 - hypothetical protein 2223 35.12 -1 2595913..2596080 + 55 53713514 - BF2225 - hypothetical protein 2224 43.80 0 2596096..2596563 + 155 53713515 - BF2226 - hypothetical protein 2225 44.22 0 2596774..2599107 + 777 53713516 - BF2227 - penicillin-binding protein 1A 2226 46.61 0 2599121..2599489 + 122 53713517 - BF2228 - putative 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 2227 43.28 0 2599552..2600838 + 428 53713518 - BF2229 - putative zinc protease 2228 41.86 0 2600889..2602049 + 386 53713519 - BF2230 - putative phosphatidylinositol-4-phosphate 5-kinase 2229 44.88 0 2602130..2603047 - 305 53713520 - BF2231 - ribose-phosphate pyrophosphokinase 2230 41.00 0 2603199..2607674 + 1491 53713521 - BF2232 - putative two-component system sensor histidine kinase 2231 41.56 0 2607703..2608431 + 242 53713522 - BF2233 - two-component system response regulator 2232 42.27 0 2608421..2609875 + 484 53713523 - BF2234 - putative efflux pump component protein 2233 39.55 0 2610408..2610584 - 58 53713524 - BF2235 - hypothetical protein 2234 35.06 -1 2610645..2610818 + 57 53713525 - BF2236 - hypothetical protein 2235 28.85 -2 2610802..2610957 + 51 53713526 - BF2237 - hypothetical protein 2236 34.69 -1 2611141..2611878 + 245 53713527 - BF2238 - hypothetical protein 2237 36.38 -1 2611996..2612979 + 327 53713528 - BF2239 - para-aminobenzoate synthase component I 2238 36.01 -1 2612963..2613559 + 198 53713529 - BF2240 - hypothetical protein 2239 32.80 -1 2613665..2613850 + 61 53713530 - BF2241 - hypothetical protein 2240 37.22 -1 2613847..2614515 + 222 53713531 - BF2242 - hypothetical protein 2241 39.69 0 2614584..2616596 + 670 53713532 - BF2243 - 1,4-alpha-glucan branching enzyme 2242 37.69 0 2616672..2618369 - 565 53713533 - BF2244 - alpha-amylase 2243 38.53 0 2618380..2619438 - 352 53713534 - BF2245 - oxidoreductase 2244 39.28 0 2619429..2620235 - 268 53713535 - BF2246 - hypothetical protein 2245 27.38 -2 2620219..2620386 - 55 53713536 - BF2247 - hypothetical protein 2246 40.66 0 2620405..2621619 - 404 53713537 - BF2248 - putative membrane efflux protein 2247 42.76 0 2621838..2623343 + 501 53713538 - BF2249 - glutamine synthetase I 2248 37.29 -1 2623429..2624010 + 193 53713539 - BF2250 - putative regulatory protein 2249 39.78 0 2624082..2624795 + 237 53713540 - BF2251 - putative oxidoreductase 2250 43.32 0 2624940..2625530 + 196 53713541 - BF2252 - hypothetical protein 2251 41.90 0 2625611..2625820 - 69 53713542 - BF2253 - hypothetical protein 2252 34.39 -1 2625940..2626224 - 94 53713543 - BF2254 - hypothetical protein 2253 37.13 -1 2626484..2626720 - 78 53713544 - BF2255 - hypothetical protein 2254 47.70 0 2626929..2627798 - 289 53713545 - BF2256 - succinyl-CoA synthetase alpha chain 2255 43.17 0 2627795..2628943 - 382 53713546 - BF2257 - succinyl-CoA synthetase beta chain 2256 46.40 0 2629149..2630036 - 295 53713547 - BF2258 - malonyl CoA-acyl carrier protein transacylase 2257 46.64 0 2630140..2630973 - 277 53713548 - BF2259 - phosphomethylpyrimidine kinase 2258 44.54 0 2631315..2632046 + 243 53713549 - BF2260 - hypothetical protein 2259 51.00 +1 2632098..2633603 + 501 53713550 - BF2261 - xylulose kinase 2260 48.48 0 2633693..2635012 + 439 53713551 - BF2262 - xylose isomerase 2261 48.65 0 2635078..2636526 + 482 53713552 xylE BF2263 - D-xylose transporter XylE 2262 48.14 0 2637081..2638289 - 402 53713553 - BF2264 - phosphodiesterase I 2263 45.94 0 2638395..2639933 + 512 53713554 - BF2265 - putative carbon-nitrogen hydrolase 2264 46.45 0 2640052..2640684 + 210 53713555 - BF2266 - thioredoxin peroxidase 2265 41.87 0 2640895..2641140 + 81 53713556 - BF2267 - RNA binding protein 2266 46.98 0 2641212..2642603 - 463 53713557 - BF2268 - cytochrome c peroxidase 2267 44.15 0 2642619..2643404 - 261 53713558 - BF2269 - cytochrome c biogenesis protein 2268 39.64 0 2643388..2644275 - 295 53713559 - BF2270 - hypothetical protein 2269 31.07 -2 2644535..2645152 + 205 53713560 - BF2271 - hypothetical protein 2270 36.42 -1 2645153..2645800 + 215 53713561 - BF2272 - hypothetical protein 2271 32.77 -1 2645793..2645969 + 58 53713562 - BF2273 - hypothetical protein 2272 42.76 0 2645935..2646984 - 349 53713563 - BF2274 - hypothetical protein 2273 41.19 0 2647209..2650634 + 1141 53713564 ileS BF2275 - isoleucyl-tRNA synthetase 2274 43.57 0 2650669..2651049 + 126 53713565 - BF2276 - putative DnaK suppressor protein 2275 35.70 -1 2651167..2651799 + 210 53713566 - BF2277 - putative signal peptidase 2276 37.54 -1 2651810..2652856 + 348 53713567 - BF2278 - hypothetical protein 2277 34.24 -1 2652865..2653194 + 109 53713568 - BF2279 - hypothetical protein 2278 39.37 0 2653148..2653909 - 253 53713569 - BF2280 - putative tRNA/rRNA methyltransferase 2279 38.79 0 2654280..2654792 + 170 53713570 - BF2281 - TonB 2280 36.36 -1 2654914..2657226 + 770 53713571 - BF2282 - putative outer membrane protein 2281 38.38 0 2657315..2657869 - 184 53713572 - BF2283 - hypothetical protein 2282 35.62 -1 2657991..2658428 - 145 53713573 - BF2284 - hypothetical protein 2283 24.59 -2 2658708..2658890 + 60 53713574 - BF2285 - hypothetical protein 2284 37.88 0 2658975..2659502 - 175 53713575 - BF2286 - hypothetical protein 2285 35.59 -1 2659739..2659915 + 58 53713576 - BF2287 - hypothetical protein 2286 22.44 -2 2660493..2660648 + 51 53713577 - BF2288 - hypothetical protein 2287 37.27 -1 2660685..2661827 + 380 53713578 - BF2289 - putative polyphosphate-selective porin O 2288 39.03 0 2661985..2663196 - 403 53713579 - BF2290 - putative macrolide efflux pump 2289 38.43 0 2663612..2664415 - 267 53713580 - BF2291 - metallo-beta-lactamase superfamily hydrolase 2290 40.10 0 2664494..2665882 - 462 53713581 - BF2292 - putative permease 2291 38.73 0 2666032..2667438 - 468 53713582 - BF2293 - glucuronate isomerase 2292 39.70 0 2667830..2668363 - 177 53713583 - BF2294 - hypothetical protein 2293 41.34 0 2668374..2669435 - 353 53713584 - BF2295 - hypothetical protein 2294 40.44 0 2669594..2670142 + 182 53713585 - BF2296 - dTDP-4-dehydrorhamnose 3,5-epimerase 2295 42.31 0 2670166..2671479 + 437 53713586 - BF2297 - UDP-glucose 6-dehydrogenase 2296 37.94 0 2671621..2672424 + 267 53713587 - BF2298 - hypothetical protein 2297 41.69 0 2672495..2673751 - 418 53713588 - BF2299 - ATP-dependent RNA helicase 2298 44.04 0 2673831..2675054 - 407 53713589 - BF2300 - putative phosphoserine phosphatase 2299 40.59 0 2675326..2675835 + 169 53713590 - BF2301 - hypothetical protein 2300 38.89 0 2676001..2677098 - 365 53713591 - BF2302 - hypothetical protein 2301 45.09 0 2677103..2678233 - 376 53713592 - BF2303 - tRNA-guanine transglycosylase 2302 44.23 0 2678230..2680698 - 822 53713593 - BF2304 - ATP-dependent protease 2303 44.54 0 2680883..2681596 + 237 53713594 - BF2305 - putative RNA methyltransferase 2304 34.65 -1 2681843..2682373 - 176 53713595 - BF2306 - hypothetical protein 2305 33.06 -1 2682534..2682899 - 121 53713596 - BF2307 - hypothetical protein 2306 31.52 -2 2683087..2683251 - 54 53713597 - BF2308 - hypothetical protein 2307 38.24 0 2683343..2683729 - 128 53713598 - BF2309 - hypothetical protein 2308 34.71 -1 2683736..2684170 - 144 53713599 - BF2310 - hypothetical protein 2309 35.98 -1 2684254..2684820 - 188 53713600 - BF2311 - hypothetical protein 2310 35.49 -1 2684883..2685392 - 169 53713601 - BF2312 - hypothetical protein 2311 44.78 0 2685951..2686151 + 66 53713602 - BF2313 - hypothetical protein 2312 46.05 0 2686148..2686438 + 96 53713603 - BF2314 - hypothetical protein 43.19 MEAN 5.60 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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