version 1.0
Bacteroides fragilis YCH46, complete genome - 1..5277274 4578 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1780 44.80 0 2097745..2098311 + 188 53713071 - BF1782 - hypothetical protein 1781 48.25 0 2098328..2099440 + 370 53713072 - BF1783 - hypothetical protein 1782 46.97 0 2099445..2100581 + 378 53713073 - BF1784 - clostripain-related protein 1783 44.06 0 2100819..2102468 + 549 53713074 - BF1785 - hypothetical protein 1784 42.21 0 2102564..2103487 + 307 53713075 - BF1786 - hypothetical protein 1785 46.69 0 2103514..2105085 + 523 53713076 - BF1787 - hypothetical protein 1786 44.47 0 2105104..2106216 + 370 53713077 - BF1788 - hypothetical protein 1787 45.20 0 2106243..2107211 + 322 53713078 - BF1789 - hypothetical protein 1788 45.71 0 2107232..2108209 + 325 53713079 - BF1790 - hypothetical protein 1789 42.07 0 2108237..2109175 + 312 53713080 - BF1791 - hypothetical protein 1790 45.41 0 2109192..2110193 + 333 53713081 - BF1792 - hypothetical protein 1791 42.72 0 2110197..2111165 + 322 53713082 - BF1793 - hypothetical protein 1792 41.59 0 2111190..2112182 + 330 53713083 - BF1794 - hypothetical protein 1793 44.51 0 2112196..2113260 + 354 53713084 - BF1795 - hypothetical protein 1794 43.80 0 2113276..2114202 + 308 53713085 - BF1796 - hypothetical protein 1795 44.97 0 2114221..2115792 + 523 53713086 - BF1797 - hypothetical protein 1796 44.44 0 2115836..2116906 + 356 53713087 - BF1798 - hypothetical protein 1797 43.68 0 2116903..2117859 + 318 53713088 - BF1799 - hypothetical protein 1798 44.67 0 2117801..2119432 + 543 53713089 - BF1800 - hypothetical protein 1799 43.65 0 2119433..2120392 + 319 53713090 - BF1801 - hypothetical protein 1800 54.51 +2 2120487..2121671 + 394 53713091 - BF1802 - hypothetical protein 1801 53.22 +1 2121808..2123808 + 666 53713092 - BF1803 - hypothetical protein 1802 50.14 +1 2123814..2124182 + 122 53713093 - BF1804 - hypothetical protein 1803 50.41 +1 2124224..2125207 + 327 53713094 - BF1805 - hypothetical protein 1804 53.91 +1 2125341..2127464 - 707 53713095 - BF1806 - RNA-binding protein 1805 49.32 +1 2127576..2129495 + 639 53713096 - BF1807 - two-component system sensor histidine kinase 1806 46.49 0 2129612..2131351 + 579 53713097 - BF1808 - 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor 1807 48.31 0 2131358..2131831 + 157 53713098 - BF1809 - GAF domain-containing protein 1808 45.43 0 2131869..2132207 + 112 53713099 - BF1810 - hypothetical protein 1809 48.04 0 2132413..2134704 + 763 53713100 - BF1811 - TonB-dependent outer membrane receptor 1810 47.77 0 2134764..2135525 + 253 53713101 - BF1812 - putative amidase 1811 45.19 0 2135698..2136279 - 193 53713102 - BF1813 - hypothetical protein 1812 46.11 0 2136852..2138213 + 453 53713103 - BF1814 - cation efflux pump 1813 42.31 0 2138358..2138513 + 51 53713104 - BF1815 - hypothetical protein 1814 42.51 0 2138859..2139305 + 148 53713105 - BF1816 - hypothetical protein 1815 46.27 0 2139417..2140769 + 450 53713106 - BF1817 - Na+ driven multidrug efflux pump 1816 49.46 +1 2140855..2142516 + 553 53713107 - BF1818 - hypothetical protein 1817 44.51 0 2142565..2144559 + 664 53713108 - BF1819 - fructose-1,6-bisphosphatase 1818 46.46 0 2144651..2145808 - 385 53713109 - BF1820 - hypothetical protein 1819 45.27 0 2145917..2147575 - 552 53713110 - BF1821 - putative long-chain-fatty-acid-CoA ligase 1820 47.74 0 2147769..2148851 - 360 53713111 - BF1822 - GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 1821 48.79 0 2148844..2149917 - 357 53713112 - BF1823 - GDP-mannose 4,6-dehydratase 1822 44.42 0 2150131..2151402 + 423 53713113 - BF1824 - putative ATPase 1823 43.16 0 2151696..2152499 - 267 53713114 - BF1825 - hypothetical protein 1824 41.09 0 2152549..2152896 - 115 53713115 - BF1826 - hypothetical protein 1825 39.23 0 2153036..2153374 - 112 53713116 - BF1827 - hypothetical protein 1826 40.38 0 2153896..2154420 + 174 53713117 - BF1828 - putative transcriptional regulatory protein UpxY-like protein 1827 40.95 0 2154424..2154909 + 161 53713118 - BF1829 - hypothetical protein 1828 42.99 0 2154906..2156189 + 427 53713119 - BF1830 - hypothetical protein 1829 49.86 +1 2156182..2156901 + 239 53713120 - BF1831 - putative glucose-1-P-cytidylyltransferase 1830 50.61 +1 2156840..2158222 + 460 53713121 - BF1832 - putative phosphoenolpyruvate phosphomutase 1831 51.36 +1 2158234..2159370 + 378 53713122 - BF1833 - putative phosphoenolpyruvate decarboxylase 1832 47.05 0 2159367..2160467 + 366 53713123 - BF1834 - putative 2-aminoethylphosphonate pyruvate aminotransferase 1833 25.90 -2 2160487..2161980 + 497 53713124 - BF1835 - putative flippase 1834 30.02 -2 2161984..2163129 + 381 53713125 - BF1836 - hypothetical protein 1835 31.95 -2 2163126..2163995 + 289 53713126 - BF1837 - putative alpha-1,2-fucosyltransferase 1836 41.88 0 2164003..2165055 + 350 53713127 - BF1838 - putative UDP-glucuronic acid epimerase 1837 42.10 0 2165058..2166380 + 440 53713128 - BF1839 - putative UDP-glucose dehydrogenase 1838 27.66 -2 2166664..2167686 + 340 53713129 - BF1840 - putative glycosyltransferase 1839 29.70 -2 2167716..2168762 + 348 53713130 - BF1841 - putative glycosyltransferase 1840 27.14 -2 2168759..2169889 + 376 53713131 - BF1842 - putative polymerase 1841 27.42 -2 2169861..2170976 + 371 53713132 - BF1843 - putative glycosyltransferase 1842 42.08 0 2170969..2171985 + 338 53713133 - BF1844 - putative dehydratase 1843 40.76 0 2171973..2173103 + 376 53713134 - BF1844.1 - putative epimerase 1844 41.90 0 2173124..2173987 + 287 53713135 - BF1845 - putative reductase 1845 34.49 -1 2173984..2175195 + 403 53713136 - BF1846 - putative glycosyltransferase 1846 38.69 0 2175218..2176225 + 335 53713137 - BF1847 - putative dehydratase 1847 41.01 0 2176229..2177179 + 316 53713138 - BF1848 - putative UndPP-QuiNAc-P-transferase 1848 40.10 0 2177339..2177530 - 63 53713139 - BF1849 - hypothetical protein 1849 38.27 0 2177514..2177756 - 80 53713140 - BF1850 - hypothetical protein 1850 46.62 0 2178167..2178640 + 157 53713141 - BF1851 - putative non-specific DNA binding protein 1851 47.33 0 2178831..2180009 - 392 53713142 - BF1852 - Na+/H+-dicarboxylate symporter 1852 47.63 0 2180142..2181617 + 491 53713143 - BF1853 - 6-phosphogluconate dehydrogenase 1853 46.63 0 2181632..2183128 + 498 53713144 - BF1854 - glucose-6-phosphate 1-dehydrogenase 1854 45.05 0 2183074..2183841 + 255 53713145 - BF1855 - 6-phosphogluconolactonase 1855 41.33 0 2184198..2184422 + 74 53713146 - BF1856 - hypothetical protein 1856 37.46 -1 2184668..2184982 + 104 53713147 - BF1857 - hypothetical protein 1857 42.91 0 2185265..2187331 + 688 53713148 - BF1858 - hypothetical protein 1858 39.28 0 2187537..2188343 + 268 53713149 - BF1859 - urea transport protein 1859 37.58 -1 2188715..2189962 + 415 53713150 - BF1860 - hypothetical protein 1860 34.09 -1 2190069..2190863 + 264 53713151 - BF1861 - hypothetical protein 1861 42.68 0 2190977..2192260 - 427 53713152 - BF1862 - SOS mutagenesis and repair protein UmuC-like protein 1862 42.79 0 2192260..2192703 - 147 53713153 - BF1863 - error-prone repair: SOS-response transcriptional repressor UmuD-like protein 1863 39.19 0 2193087..2194316 + 409 53713154 - BF1864 - hypothetical protein 1864 36.41 -1 2194327..2194749 + 140 53713155 - BF1865 - hypothetical protein 1865 42.48 0 2194812..2194964 + 50 53713156 - BF1866 - hypothetical protein 1866 32.95 -1 2195070..2195330 - 86 53713157 - BF1867 - hypothetical protein 1867 47.07 0 2195739..2196437 - 232 53713158 - BF1868 - two-component system response regulator 1868 47.58 0 2196440..2197492 - 350 53713159 - BF1869 - two-component system sensor 1869 52.33 +1 2197625..2198845 - 406 53713160 - BF1870 - ABC transporter permease protein 1870 52.42 +1 2198859..2199602 - 247 53713161 - BF1871 - putative ABC transporter ATP-binding protein 1871 52.21 +1 2199605..2200828 - 407 53713162 - BF1872 - periplasmic component of efflux system 1872 51.35 +1 2200865..2202268 - 467 53713163 - BF1873 - outer membrane efflux protein 1873 46.76 0 2202719..2202934 + 71 53713164 - BF1874 - hypothetical protein 1874 47.43 0 2202967..2204520 + 517 53713165 - BF1875 - cytochrome D ubiquinol oxidase subunit I 1875 46.48 0 2204546..2205694 + 382 53713166 - BF1876 - cytochrome D ubiquinol oxidase subunit II 1876 45.45 0 2205818..2206882 + 354 53713167 - BF1877 - hypothetical protein 1877 49.36 +1 2206887..2207897 + 336 53713168 - BF1878 - putative periplasmic protein 1878 48.94 +1 2207884..2208735 + 283 53713169 - BF1879 - putative membrane-associated metal-dependent hydrolase 1879 48.87 +1 2208732..2210012 + 426 53713170 - BF1880 - coproporphyrinogen III oxidase 43.19 MEAN 5.60 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0