version 1.0
Bacteroides fragilis YCH46, complete genome - 1..5277274 4578 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1629 37.99 0 1898396..1898932 + 178 53712920 - BF1630 - hypothetical protein 1630 33.70 -1 1899064..1899339 - 91 53712921 - BF1631 - hypothetical protein 1631 45.88 0 1899595..1900917 + 440 53712922 - BF1632 - hypothetical protein 1632 33.90 -1 1900954..1902537 + 527 53712923 - BF1633 - putative hemin receptor 1633 34.50 -1 1902939..1904057 + 372 53712924 - BF1634 - hypothetical protein 1634 47.44 0 1904135..1904602 - 155 53712925 - BF1635 - cytidine/deoxycytidylate deaminase 1635 47.99 0 1904770..1905663 - 297 53712926 - BF1636 - hypothetical protein 1636 44.22 0 1905677..1906126 - 149 53712927 - BF1637 - hypothetical protein 1637 47.54 0 1906155..1906682 - 175 53712928 - BF1638 - hypothetical protein 1638 48.85 +1 1906577..1907098 - 173 53712929 - BF1639 - putative RNA polymerase ECF-type sigma factor 1639 38.65 0 1907043..1907249 - 68 53712930 - BF1640 - hypothetical protein 1640 48.83 +1 1907252..1908238 - 328 53712931 - BF1641 - putative oxidoreductase 1641 44.44 0 1908291..1908542 + 83 53712932 - BF1642 - hypothetical protein 1642 48.85 +1 1908477..1909301 - 274 53712933 - BF1643 - glutamine ABC transporter glutamine-binding protein 1643 46.74 0 1909310..1911352 - 680 53712934 - BF1644 - hypothetical protein 1644 46.22 0 1911475..1912017 - 180 53712935 - BF1645 - ketoisovalerate oxidoreductase subunit VorA 1645 47.51 0 1912036..1912797 - 253 53712936 - BF1646 - ketoisovalerate oxidoreductase subunit VorA 1646 39.08 0 1912894..1913067 - 57 53712937 - BF1647 - hypothetical protein 1647 49.31 +1 1913078..1914160 - 360 53712938 - BF1648 - 2-ketoisovalerate ferredoxin reductase 1648 44.30 0 1914172..1914399 - 75 53712939 - BF1649 - hypothetical protein 1649 40.58 0 1914418..1914693 - 91 53712940 - BF1650 - hypothetical protein 1650 48.05 0 1915003..1915437 - 144 53712941 - BF1651 - ribose 5-phosphate isomerase B 1651 49.00 +1 1915520..1917529 - 669 53712942 - BF1652 - transketolase 1652 45.19 0 1917684..1918838 - 384 53712943 - BF1653 - galactokinase 1653 45.40 0 1918874..1920199 - 441 53712944 - BF1654 - glucose/galactose transporter 1654 46.81 0 1920250..1921347 - 365 53712945 - BF1655 - aldose 1-epimerase precursor 1655 43.11 0 1921611..1922582 + 323 53712946 - BF1656 - mannose-6-phosphate isomerase 1656 48.11 0 1922648..1922911 - 87 53712947 - BF1657 - hypothetical protein 1657 36.89 -1 1922916..1923281 - 121 53712948 - BF1658 - hypothetical protein 1658 41.43 0 1923308..1923517 - 69 53712949 - BF1659 - hypothetical protein 1659 45.09 0 1923815..1925098 - 427 53712950 - BF1660 - ATP-dependent RNA helicase DeaD 1660 45.40 0 1925289..1926059 + 256 53712951 - BF1661 - putative short-chain dehydrogenase 1661 42.37 0 1926174..1926671 + 165 53712952 - BF1662 - hypothetical protein 1662 39.36 0 1926989..1927801 + 270 53712953 - BF1663 - hypothetical protein 1663 47.20 0 1928054..1930729 - 891 53712954 - BF1664 - beta-galactosidase 1664 46.15 0 1931364..1932182 + 272 53712955 - BF1665 - sulfite synthesis pathway protein CysQ 1665 43.35 0 1932203..1933759 + 518 53712956 - BF1666 - putative Na+/sulfate symporter 1666 45.98 0 1933788..1934396 + 202 53712957 - BF1667 - putative adenylylsulfate kinase 1667 44.85 0 1934424..1935335 + 303 53712958 - BF1668 - sulfate adenylyltransferase subunit 2 1668 43.47 0 1935347..1936777 + 476 53712959 cysN BF1669 - sulfate adenylyltransferase subunit 1 1669 41.37 0 1936848..1937954 + 368 53712960 - BF1670 - hypothetical protein 1670 44.24 0 1937970..1938932 + 320 53712961 - BF1671 - hypothetical protein 1671 41.10 0 1939201..1939599 - 132 53712962 - BF1672 - hypothetical protein 1672 45.19 0 1939823..1940944 - 373 53712963 - BF1673 - outer membrane porin F precursor 1673 41.30 0 1940946..1941761 - 271 53712964 - BF1674 - hypothetical protein 1674 41.55 0 1941813..1944026 - 737 53712965 - BF1675 - hypothetical protein 1675 36.83 -1 1944043..1944987 - 314 53712966 - BF1676 - hypothetical protein 1676 35.38 -1 1945290..1946510 + 406 53712967 - BF1677 - tyrosine type site-specific recombinase 1677 38.22 0 1947230..1948477 + 415 53712968 - BF1679 - hypothetical protein 1678 40.58 0 1948488..1949564 + 358 53712969 - BF1680 - hypothetical protein 1679 43.07 0 1949632..1950381 + 249 53712970 - BF1681 - hypothetical protein 1680 44.24 0 1950443..1951561 + 372 53712971 - BF1682 - major outer membrane protein OmpA 1681 41.01 0 1951683..1952099 + 138 53712972 - BF1683 - Holliday junction resolvase-like protein 1682 40.90 0 1952135..1952689 + 184 53712973 def BF1684 - peptide deformylase 1683 38.67 0 1952808..1954025 - 405 53712974 - BF1685 - hypothetical protein 1684 42.65 0 1954328..1956376 + 682 53712975 - BF1686 - hypothetical protein 1685 44.00 0 1956457..1958397 + 646 53712976 - BF1687 - threonyl-tRNA synthetase 1686 39.87 0 1958516..1959127 + 203 53712977 infC BF1688 - translation initiation factor IF-3 1687 36.36 -1 1959193..1959390 + 65 53712978 rpmI BF1689 - 50S ribosomal protein L35 1688 41.88 0 1959491..1959841 + 116 53712979 rplT BF1690 - 50S ribosomal protein L20 1689 42.68 0 1960270..1961061 + 263 53712980 - BF1691 - hypothetical protein 1690 40.35 0 1961136..1961705 - 189 53712981 - BF1692 - xanthine phosphoribosyltransferase 1691 44.27 0 1961791..1963098 - 435 53712982 - BF1693 - phenylacetate-coenzyme A ligase 1692 42.39 0 1963202..1963786 - 194 53712983 - BF1694 - indolepyruvate oxidoreductase subunit B 1693 45.07 0 1963790..1965382 - 530 53712984 - BF1695 - indolepyruvate oxidoreductase subunit IorA 1694 41.14 0 1965466..1966503 - 345 53712985 - BF1696 - hypothetical protein 1695 40.73 0 1966661..1967539 - 292 53712986 - BF1697 - putative endonuclease 1696 38.84 0 1968134..1969696 - 520 53712987 - BF1698 - putative cell surface antigen 1697 30.30 -2 1969855..1970019 - 54 53712988 - BF1699 - hypothetical protein 1698 38.01 0 1970389..1972293 + 634 53712989 - BF1700 - capsular polysaccharide biosynthesis protein CapD 1699 40.56 0 1972408..1974966 + 852 53712990 - BF1701 - putative capsule polysaccharide export protein 1700 39.35 0 1974972..1976084 + 370 53712991 - BF1702 - putative protein involved in capsular polysaccharide biosynthesis 1701 41.62 0 1976060..1976590 + 176 53712992 - BF1703 - putative transcriptional regulator 1702 42.83 0 1976539..1977054 + 171 53712993 - BF1704 - hypothetical protein 1703 36.81 -1 1977051..1978259 - 402 53712994 - BF1705 - putative xylose repressor 1704 39.98 0 1978557..1979474 + 305 53712995 - BF1706 - N-acetylneuraminate lyase 1705 42.19 0 1979498..1980682 + 394 53712996 - BF1707 - renin-binding protein-related protein 1706 41.16 0 1980698..1981936 + 412 53712997 - BF1708 - major facilitator family transporter 1707 38.03 0 1981951..1982397 + 148 53712998 - BF1709 - hypothetical protein 1708 38.50 0 1982867..1986196 + 1109 53712999 - BF1710 - hypothetical protein 1709 36.20 -1 1986218..1987786 + 522 53713000 - BF1711 - hypothetical protein 1710 43.08 0 1988597..1988791 + 64 53713001 - BF1712 - hypothetical protein 1711 41.16 0 1989398..1992667 + 1089 53713002 - BF1713 - hypothetical protein 1712 39.02 0 1992696..1994312 + 538 53713003 - BF1714 - hypothetical protein 1713 39.33 0 1994418..1995668 - 416 53713004 - BF1715 - hypothetical protein 1714 27.42 -2 1996081..1996266 - 61 53713005 - BF1716 - hypothetical protein 1715 33.33 -1 1996359..1997681 - 440 53713006 - BF1717 - putative ATPase 1716 38.96 0 1998161..2001412 + 1083 53713007 - BF1718 - hypothetical protein 1717 37.41 -1 2001433..2003052 + 539 53713008 - BF1719 - hypothetical protein 1718 38.07 0 2003249..2004727 + 492 53713009 - BF1720 - alpha-L-fucosidase 1719 28.10 -2 2004877..2005392 - 171 53713010 - BF1721 - hypothetical protein 1720 39.65 0 2006097..2009420 + 1107 53713011 - BF1722 - hypothetical protein 1721 38.45 0 2009438..2011000 + 520 53713012 - BF1723 - hypothetical protein 1722 40.14 0 2011115..2012686 - 523 53713013 - BF1724 - hypothetical protein 1723 39.97 0 2012714..2015983 - 1089 53713014 - BF1725 - hypothetical protein 1724 41.93 0 2016683..2019904 + 1073 53713015 - BF1726 - hypothetical protein 1725 42.91 0 2019916..2021931 + 671 53713016 - BF1727 - hypothetical protein 1726 30.69 -2 2021974..2022162 + 62 53713017 - BF1728 - hypothetical protein 1727 42.45 0 2022215..2023849 + 544 53713018 - BF1729 - sialidase 1728 40.98 0 2023881..2025893 + 670 53713019 - BF1730 - beta-N-acetylhexosaminidase 43.19 MEAN 5.60 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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