version 1.0
Bacteroides fragilis YCH46, complete genome - 1..5277274 4578 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1600 51.40 +1 1861535..1862176 - 213 53712891 bioD BF1600 - dithiobiotin synthetase 1601 50.14 +1 1862211..1863686 - 491 53712892 - BF1601 - putative biotin synthesis protein BioC 1602 49.08 +1 1863694..1864887 - 397 53712893 - BF1602 - 8-amino-7-oxononanoate synthase 1603 52.87 +1 1865026..1867272 - 748 53712894 - BF1603 - adenosylmethionine-8-amino-7-oxononanoate aminotransferase 1604 48.01 0 1867269..1867670 - 133 53712895 - BF1604 - hypothetical protein 1605 48.13 0 1867997..1871125 + 1042 53712896 - BF1605 - hypothetical protein 1606 45.95 0 1871161..1872825 + 554 53712897 - BF1606 - hypothetical protein 1607 46.93 0 1872961..1874460 - 499 53712898 - BF1608 - L-lactate permease 1608 45.41 0 1874665..1876113 - 482 53712899 - BF1609 - hypothetical protein 1609 46.26 0 1876165..1876752 - 195 53712900 - BF1610 - hypothetical protein 1610 50.03 +1 1877020..1878564 + 514 53712901 - BF1611 - propionyl-CoA carboxylase beta chain 1611 48.21 0 1878583..1880094 + 503 53712902 - BF1612 - biotin carboxylase 1612 46.86 0 1880108..1880632 + 174 53712903 - BF1613 - biotin carboxyl carrier protein 1613 47.82 0 1880738..1882000 - 420 53712904 - BF1614 - hypothetical protein 1614 45.43 0 1882447..1884108 + 553 53712905 - BF1615 - hypothetical protein 1615 44.95 0 1884130..1885722 + 530 53712906 - BF1616 - hypothetical protein 1616 41.55 0 1885903..1886109 - 68 53712907 - BF1617 - hypothetical protein 1617 46.67 0 1886674..1888023 + 449 53712908 - BF1618 - dihydrolipoamide dehydrogenase 1618 47.01 0 1888023..1888724 + 233 53712909 - BF1619 - lipoate-protein ligase A 1619 35.68 -1 1888911..1889123 - 70 53712910 - BF1620 - hypothetical protein 1620 49.71 +1 1889232..1890599 + 455 53712911 - BF1621 - lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex 1621 49.63 +1 1890743..1892779 + 678 53712912 - BF1622 - 2-oxoisovalerate dehydrogenase beta subunit 1622 44.77 0 1892798..1893304 + 168 53712913 - BF1623 - flavodoxin FldA 1623 47.33 0 1893381..1894223 - 280 53712914 prmA BF1624 - ribosomal protein L11 methyltransferase 1624 39.09 0 1894865..1895194 + 109 53712915 - BF1625 - hypothetical protein 1625 33.33 -1 1895449..1895610 + 53 53712916 - BF1626 - hypothetical protein 1626 34.59 -1 1895720..1895878 - 52 53712917 - BF1627 - hypothetical protein 1627 33.61 -1 1896213..1897670 + 485 53712918 - BF1628 - hypothetical protein 1628 30.71 -2 1897678..1898211 + 177 53712919 - BF1629 - hypothetical protein 1629 37.99 0 1898396..1898932 + 178 53712920 - BF1630 - hypothetical protein 1630 33.70 -1 1899064..1899339 - 91 53712921 - BF1631 - hypothetical protein 1631 45.88 0 1899595..1900917 + 440 53712922 - BF1632 - hypothetical protein 1632 33.90 -1 1900954..1902537 + 527 53712923 - BF1633 - putative hemin receptor 1633 34.50 -1 1902939..1904057 + 372 53712924 - BF1634 - hypothetical protein 1634 47.44 0 1904135..1904602 - 155 53712925 - BF1635 - cytidine/deoxycytidylate deaminase 1635 47.99 0 1904770..1905663 - 297 53712926 - BF1636 - hypothetical protein 1636 44.22 0 1905677..1906126 - 149 53712927 - BF1637 - hypothetical protein 1637 47.54 0 1906155..1906682 - 175 53712928 - BF1638 - hypothetical protein 1638 48.85 +1 1906577..1907098 - 173 53712929 - BF1639 - putative RNA polymerase ECF-type sigma factor 1639 38.65 0 1907043..1907249 - 68 53712930 - BF1640 - hypothetical protein 1640 48.83 +1 1907252..1908238 - 328 53712931 - BF1641 - putative oxidoreductase 1641 44.44 0 1908291..1908542 + 83 53712932 - BF1642 - hypothetical protein 1642 48.85 +1 1908477..1909301 - 274 53712933 - BF1643 - glutamine ABC transporter glutamine-binding protein 1643 46.74 0 1909310..1911352 - 680 53712934 - BF1644 - hypothetical protein 1644 46.22 0 1911475..1912017 - 180 53712935 - BF1645 - ketoisovalerate oxidoreductase subunit VorA 1645 47.51 0 1912036..1912797 - 253 53712936 - BF1646 - ketoisovalerate oxidoreductase subunit VorA 1646 39.08 0 1912894..1913067 - 57 53712937 - BF1647 - hypothetical protein 1647 49.31 +1 1913078..1914160 - 360 53712938 - BF1648 - 2-ketoisovalerate ferredoxin reductase 1648 44.30 0 1914172..1914399 - 75 53712939 - BF1649 - hypothetical protein 1649 40.58 0 1914418..1914693 - 91 53712940 - BF1650 - hypothetical protein 1650 48.05 0 1915003..1915437 - 144 53712941 - BF1651 - ribose 5-phosphate isomerase B 1651 49.00 +1 1915520..1917529 - 669 53712942 - BF1652 - transketolase 1652 45.19 0 1917684..1918838 - 384 53712943 - BF1653 - galactokinase 1653 45.40 0 1918874..1920199 - 441 53712944 - BF1654 - glucose/galactose transporter 1654 46.81 0 1920250..1921347 - 365 53712945 - BF1655 - aldose 1-epimerase precursor 1655 43.11 0 1921611..1922582 + 323 53712946 - BF1656 - mannose-6-phosphate isomerase 1656 48.11 0 1922648..1922911 - 87 53712947 - BF1657 - hypothetical protein 1657 36.89 -1 1922916..1923281 - 121 53712948 - BF1658 - hypothetical protein 1658 41.43 0 1923308..1923517 - 69 53712949 - BF1659 - hypothetical protein 1659 45.09 0 1923815..1925098 - 427 53712950 - BF1660 - ATP-dependent RNA helicase DeaD 1660 45.40 0 1925289..1926059 + 256 53712951 - BF1661 - putative short-chain dehydrogenase 1661 42.37 0 1926174..1926671 + 165 53712952 - BF1662 - hypothetical protein 1662 39.36 0 1926989..1927801 + 270 53712953 - BF1663 - hypothetical protein 1663 47.20 0 1928054..1930729 - 891 53712954 - BF1664 - beta-galactosidase 1664 46.15 0 1931364..1932182 + 272 53712955 - BF1665 - sulfite synthesis pathway protein CysQ 1665 43.35 0 1932203..1933759 + 518 53712956 - BF1666 - putative Na+/sulfate symporter 1666 45.98 0 1933788..1934396 + 202 53712957 - BF1667 - putative adenylylsulfate kinase 1667 44.85 0 1934424..1935335 + 303 53712958 - BF1668 - sulfate adenylyltransferase subunit 2 1668 43.47 0 1935347..1936777 + 476 53712959 cysN BF1669 - sulfate adenylyltransferase subunit 1 1669 41.37 0 1936848..1937954 + 368 53712960 - BF1670 - hypothetical protein 1670 44.24 0 1937970..1938932 + 320 53712961 - BF1671 - hypothetical protein 1671 41.10 0 1939201..1939599 - 132 53712962 - BF1672 - hypothetical protein 1672 45.19 0 1939823..1940944 - 373 53712963 - BF1673 - outer membrane porin F precursor 1673 41.30 0 1940946..1941761 - 271 53712964 - BF1674 - hypothetical protein 1674 41.55 0 1941813..1944026 - 737 53712965 - BF1675 - hypothetical protein 1675 36.83 -1 1944043..1944987 - 314 53712966 - BF1676 - hypothetical protein 1676 35.38 -1 1945290..1946510 + 406 53712967 - BF1677 - tyrosine type site-specific recombinase 1677 38.22 0 1947230..1948477 + 415 53712968 - BF1679 - hypothetical protein 1678 40.58 0 1948488..1949564 + 358 53712969 - BF1680 - hypothetical protein 1679 43.07 0 1949632..1950381 + 249 53712970 - BF1681 - hypothetical protein 1680 44.24 0 1950443..1951561 + 372 53712971 - BF1682 - major outer membrane protein OmpA 1681 41.01 0 1951683..1952099 + 138 53712972 - BF1683 - Holliday junction resolvase-like protein 1682 40.90 0 1952135..1952689 + 184 53712973 def BF1684 - peptide deformylase 1683 38.67 0 1952808..1954025 - 405 53712974 - BF1685 - hypothetical protein 1684 42.65 0 1954328..1956376 + 682 53712975 - BF1686 - hypothetical protein 1685 44.00 0 1956457..1958397 + 646 53712976 - BF1687 - threonyl-tRNA synthetase 1686 39.87 0 1958516..1959127 + 203 53712977 infC BF1688 - translation initiation factor IF-3 1687 36.36 -1 1959193..1959390 + 65 53712978 rpmI BF1689 - 50S ribosomal protein L35 1688 41.88 0 1959491..1959841 + 116 53712979 rplT BF1690 - 50S ribosomal protein L20 1689 42.68 0 1960270..1961061 + 263 53712980 - BF1691 - hypothetical protein 1690 40.35 0 1961136..1961705 - 189 53712981 - BF1692 - xanthine phosphoribosyltransferase 1691 44.27 0 1961791..1963098 - 435 53712982 - BF1693 - phenylacetate-coenzyme A ligase 1692 42.39 0 1963202..1963786 - 194 53712983 - BF1694 - indolepyruvate oxidoreductase subunit B 1693 45.07 0 1963790..1965382 - 530 53712984 - BF1695 - indolepyruvate oxidoreductase subunit IorA 1694 41.14 0 1965466..1966503 - 345 53712985 - BF1696 - hypothetical protein 1695 40.73 0 1966661..1967539 - 292 53712986 - BF1697 - putative endonuclease 1696 38.84 0 1968134..1969696 - 520 53712987 - BF1698 - putative cell surface antigen 1697 30.30 -2 1969855..1970019 - 54 53712988 - BF1699 - hypothetical protein 1698 38.01 0 1970389..1972293 + 634 53712989 - BF1700 - capsular polysaccharide biosynthesis protein CapD 1699 40.56 0 1972408..1974966 + 852 53712990 - BF1701 - putative capsule polysaccharide export protein 43.19 MEAN 5.60 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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