IslandPathversion 1.0

IslandPath Analysis: Bartonella bacilliformis KC583



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 39.00 STD DEV: 4.11
Bartonella bacilliformis KC583, complete genome - 1..1445021
1283 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
625	 41.87	0	681747..683831	+	694	121602191	fusA1	BARBAKC583_0663	-	elongation factor G
626	 44.98	+1	683896..685071	+	391	121601791	tuf2	BARBAKC583_0664	-	elongation factor Tu
627	 46.28	+1	685140..685448	+	102	121602082	rpsJ1	BARBAKC583_0665	-	ribosomal protein S10
628	 43.86	+1	685476..686216	+	246	121602668	rplC	BARBAKC583_0666	-	50S ribosomal protein L3
629	 40.10	0	686216..686836	+	206	121602068	rplD	BARBAKC583_0667	-	50S ribosomal protein L4
630	 35.71	0	686833..687126	+	97	121602627	rplW	BARBAKC583_0668	-	50S ribosomal protein L23
631	 44.00	+1	687141..687974	+	277	121602559	rplB	BARBAKC583_0669	-	50S ribosomal protein L2
632	 43.37	+1	687990..688268	+	92	121601820	rpsS	BARBAKC583_0670	-	30S ribosomal protein S19
633	 41.28	0	688271..688660	+	129	121601656	rplV	BARBAKC583_0671	-	50S ribosomal protein L22
634	 44.02	+1	688660..689370	+	236	121602523	rpsC	BARBAKC583_0672	-	30S ribosomal protein S3
635	 46.62	+1	689407..689820	+	137	121602176	rplP	BARBAKC583_0673	-	50S ribosomal protein L16
636	 37.81	0	689833..690033	+	66	121602387	rpmC1	BARBAKC583_0674	-	50S ribosomal protein L29
637	 40.74	0	690045..690287	+	80	121602639	rpsQ	BARBAKC583_0675	-	30S ribosomal protein S17
638	 46.07	+1	690436..690804	+	122	121602071	rplN	BARBAKC583_0676	-	50S ribosomal protein L14
639	 39.68	0	690817..691131	+	104	121601949	rplX	BARBAKC583_0677	-	50S ribosomal protein L24
640	 39.63	0	691124..691504	+	126	121602514	rplE1	BARBAKC583_0678	-	ribosomal protein L5
641	 37.06	0	691542..692051	+	169	121602055	-	BARBAKC583_0679	-	hypothetical protein
642	 31.81	-1	692184..692708	+	174	121602681	-	BARBAKC583_0680	-	hypothetical protein
643	 38.80	0	692962..694881	-	639	121602256	-	BARBAKC583_0681	-	hypothetical protein
644	 39.70	0	696166..696840	+	224	121601738	-	BARBAKC583_0684	-	putative protein-L-isoaspartate O-methyltransferase
645	 40.39	0	696894..698111	+	405	121602288	-	BARBAKC583_0685	-	TolC family type I secretion outer membrane protein
646	 37.67	0	698294..698869	+	191	121601963	-	BARBAKC583_0686	-	hypothetical protein
647	 39.53	0	699033..701759	+	908	121602503	valS	BARBAKC583_0687	-	valyl-tRNA synthetase
648	 37.82	0	702327..703061	-	244	121602087	gltL2	BARBAKC583_0688	-	glutamate/aspartate ABC transporter, ATP-binding protein
649	 34.87	-1	703085..703801	-	238	121602648	gltK2	BARBAKC583_0689	-	glutamate/aspartate ABC transporter, permease protein GltK
650	 35.72	0	703803..704555	-	250	121602217	gltJ2	BARBAKC583_0690	-	glutamate/aspartate ABC transporter, permease protein GltJ
651	 35.86	0	704701..705609	-	302	121602769	gltI2	BARBAKC583_0691	-	glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein
652	 35.73	0	705727..706518	-	263	121602536	xth3	BARBAKC583_0692	-	exodeoxyribonuclease III
653	 45.97	+1	707000..707371	+	123	121601641	rpsL	BARBAKC583_0693	-	30S ribosomal protein S12
654	 45.01	+1	707403..707873	+	156	121602421	rpsG2	BARBAKC583_0694	-	30S ribosomal protein S7
655	 41.87	0	707903..709987	+	694	121602185	fusA2	BARBAKC583_0695	-	elongation factor G
656	 44.98	+1	710052..711227	+	391	121602898	tuf3	BARBAKC583_0696	-	elongation factor Tu
657	 46.28	+1	711296..711604	+	102	121602045	rpsJ2	BARBAKC583_0697	-	ribosomal protein S10
658	 43.86	+1	711632..712372	+	246	121601833	rplC	BARBAKC583_0698	-	50S ribosomal protein L3
659	 40.10	0	712372..712992	+	206	121602137	rplD	BARBAKC583_0699	-	50S ribosomal protein L4
660	 35.71	0	712989..713282	+	97	121602705	rplW	BARBAKC583_0700	-	50S ribosomal protein L23
661	 44.00	+1	713297..714130	+	277	121601972	rplB	BARBAKC583_0701	-	50S ribosomal protein L2
662	 43.37	+1	714146..714424	+	92	121602439	rpsS	BARBAKC583_0702	-	30S ribosomal protein S19
663	 41.28	0	714427..714816	+	129	121602710	rplV	BARBAKC583_0703	-	50S ribosomal protein L22
664	 44.02	+1	714816..715526	+	236	121602435	rpsC	BARBAKC583_0704	-	30S ribosomal protein S3
665	 46.62	+1	715563..715976	+	137	121601897	rplP	BARBAKC583_0705	-	50S ribosomal protein L16
666	 37.81	0	715989..716189	+	66	121602218	rpmC2	BARBAKC583_0706	-	50S ribosomal protein L29
667	 40.74	0	716201..716443	+	80	121602430	rpsQ	BARBAKC583_0707	-	30S ribosomal protein S17
668	 46.07	+1	716592..716960	+	122	121602061	rplN	BARBAKC583_0708	-	50S ribosomal protein L14
669	 39.68	0	716973..717287	+	104	121601924	rplX	BARBAKC583_0709	-	50S ribosomal protein L24
670	 39.07	0	717280..717837	+	185	121601971	rplE	BARBAKC583_0710	-	50S ribosomal protein L5
671	 45.42	+1	717862..718167	+	101	121602699	rpsN	BARBAKC583_0711	-	30S ribosomal protein S14
672	 38.60	0	718182..718580	+	132	121602134	rpsH	BARBAKC583_0712	-	30S ribosomal protein S8
673	 40.07	0	718619..719152	+	177	121602857	rplF	BARBAKC583_0713	-	50S ribosomal protein L6
674	 42.15	0	719165..719527	+	120	121601954	rplR	BARBAKC583_0714	-	50S ribosomal protein L18
675	 43.51	+1	719639..720208	+	189	121602355	rpsE	BARBAKC583_0715	-	30S ribosomal protein S5
676	 38.65	0	720241..720447	+	68	121602739	rpmD	BARBAKC583_0716	-	50S ribosomal protein L30
677	 38.92	0	720475..720939	+	154	121602515	rplO	BARBAKC583_0717	-	50S ribosomal protein L15
678	 36.82	0	721068..722414	+	448	121602796	secY	BARBAKC583_0718	-	preprotein translocase subunit SecY
679	 38.00	0	722411..722989	+	192	121602066	adk	BARBAKC583_0719	-	adenylate kinase
680	 45.80	+1	723176..723544	+	122	121602910	rpsM	BARBAKC583_0720	-	30S ribosomal protein S13
681	 47.18	+1	723667..724056	+	129	121602190	rpsK	BARBAKC583_0721	-	30S ribosomal protein S11
682	 37.97	0	724147..725160	+	337	121601834	rpoA	BARBAKC583_0722	-	DNA-directed RNA polymerase subunit alpha
683	 42.96	0	725185..725610	+	141	121601649	rplQ	BARBAKC583_0723	-	50S ribosomal protein L17
684	 36.27	0	725791..727185	+	464	121602357	-	BARBAKC583_0724	-	putative protease do
685	 40.98	0	727195..728514	+	439	121602885	-	BARBAKC583_0726	-	recombination factor protein RarA
686	 29.48	-2	728485..728847	-	120	121601773	-	BARBAKC583_0725	-	hypothetical protein
687	 40.42	0	728971..730014	+	347	121602844	recA	BARBAKC583_0727	-	recombinase A
688	 38.97	0	730206..732866	+	886	121601991	alaS	BARBAKC583_0728	-	alanyl-tRNA synthetase
689	 37.30	0	732964..734751	-	595	121602048	ndvA	BARBAKC583_0729	-	cyclic beta-1,2-glucan ABC transporter
690	 41.06	0	734949..735932	+	327	121602476	-	BARBAKC583_0730	-	RluA family pseudouridine synthase
691	 38.30	0	736321..737106	+	261	121602261	-	BARBAKC583_0731	-	ATP12 chaperone family protein
692	 31.50	-1	737136..737681	-	181	121602637	-	BARBAKC583_0732	-	hypothetical protein
693	 38.94	0	737835..739244	-	469	121602001	glnA	BARBAKC583_0733	-	glutamine synthetase, type I
694	 40.14	0	739902..742796	-	964	121602160	uvrA	BARBAKC583_0735	-	excinuclease ABC subunit A
695	 37.45	0	742995..743528	+	177	121601719	ssb	BARBAKC583_0736	-	single-stranded DNA-binding protein
696	 42.23	0	744012..746798	+	928	121602587	gyrA	BARBAKC583_0737	-	DNA gyrase subunit A
697	 39.61	0	746801..747310	+	169	121601709	coaD	BARBAKC583_0738	-	phosphopantetheine adenylyltransferase
698	 36.98	0	747325..747900	+	191	121602490	-	BARBAKC583_0739	-	peptidyl-prolyl cis-trans isomerase B
699	 38.40	0	747917..748429	+	170	121601934	-	BARBAKC583_0740	-	peptidyl-prolyl cis-trans isomerase, cyclophilin-type
700	 43.30	+1	748730..749863	+	377	121602338	tgt	BARBAKC583_0741	-	queuine tRNA-ribosyltransferase
701	 36.63	0	750669..752093	-	474	121602416	-	BARBAKC583_0742	-	major facilitator transporter
702	 37.94	0	752211..753425	-	404	121602400	-	BARBAKC583_0743	-	isocitrate dehydrogenase
703	 32.71	-1	753707..754348	+	213	121601707	-	BARBAKC583_0744	-	hypothetical protein
704	 42.12	0	755316..756305	+	329	121602602	glpX	BARBAKC583_0746	-	fructose 1,6-bisphosphatase II
705	 36.31	0	756404..757510	-	368	121602725	ilvE	BARBAKC583_0747	-	branched-chain amino acid aminotransferase
706	 33.41	-1	758037..760544	-	835	121602858	-	BARBAKC583_0748	-	sporulation and cell division repeat-containing protein
707	 36.69	0	760680..762437	-	585	121602184	argS	BARBAKC583_0749	-	arginyl-tRNA synthetase
708	 38.60	0	762468..763664	-	398	121602687	-	BARBAKC583_0750	-	deoxyguanosinetriphosphate triphosphohydrolase-like protein
709	 35.49	0	763771..764094	+	107	121601807	-	BARBAKC583_0751	-	iron-sulfur cluster assembly accessory protein
710	 36.86	0	764155..765117	+	320	121602335	-	BARBAKC583_0752	-	hypothetical protein
711	 34.13	-1	765167..765919	+	250	121601918	-	BARBAKC583_0753	-	putative cytochrome c-type biogenesis protein
712	 36.22	0	765970..767319	+	449	121601801	-	BARBAKC583_0754	-	putative UDP-N-acetylglucosamine pyrophosphorylase
713	 37.83	0	767497..769320	+	607	121602560	glmS	BARBAKC583_0755	-	D-fructose-6-phosphate amidotransferase
714	 40.49	0	769544..771652	-	702	121602903	recG	BARBAKC583_0756	-	ATP-dependent DNA helicase RecG
715	 36.74	0	771789..773549	-	586	121602208	-	BARBAKC583_0757	-	putative microcin immunity protein
716	 40.19	0	773945..775885	-	646	121601964	-	BARBAKC583_0758	-	hypothetical protein
717	 26.32	-2	776209..776322	+	37	121602450	-	BARBAKC583_0759	-	hypothetical protein
718	 39.67	0	776689..778029	-	446	121602177	accC	BARBAKC583_0761	-	acetyl-CoA carboxylase biotin carboxylase subunit
719	 39.54	0	778044..778526	-	160	121602597	accB	BARBAKC583_0762	-	acetyl-CoA carboxylase biotin carboxyl carrier protein subunit
720	 29.70	-2	778743..779540	-	265	121602002	-	BARBAKC583_0763	-	thioredoxin domain-containing protein
721	 36.93	0	779961..780572	-	203	121602889	purN	BARBAKC583_0764	-	phosphoribosylglycinamide formyltransferase
722	 39.04	0	780569..781654	-	361	121602342	purM	BARBAKC583_0765	-	phosphoribosylaminoimidazole synthetase
723	 34.98	0	781822..783036	+	404	121602761	-	BARBAKC583_0766	-	hypothetical protein
724	 35.80	0	783033..783722	+	229	121602210	-	BARBAKC583_0767	-	hypothetical protein
39.00	MEAN

4.11	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.