IslandPathversion 1.0

IslandPath Analysis: Bartonella bacilliformis KC583



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 39.00 STD DEV: 4.11
Bartonella bacilliformis KC583, complete genome - 1..1445021
1283 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
177	 48.88	+2	187140..187673	-	177	121602826	-	BARBAKC583_0178	-	deoxyuridine 5'-triphosphate nucleotidohydrolase
178	 49.12	+2	188468..188581	+	37	121602053	-	BARBAKC583_0179	-	hypothetical protein
179	 45.52	+1	188775..189578	-	267	121602610	-	BARBAKC583_0180	-	hypothetical protein
180	 46.67	+1	189905..190024	+	39	121602169	-	BARBAKC583_0181	-	hypothetical protein
181	 43.80	+1	190035..190607	-	190	121602762	-	BARBAKC583_0182	-	DsbB domain-containing protein
182	 39.61	0	190620..191240	-	206	121602780	-	BARBAKC583_0183	-	hypothetical protein
183	 43.24	+1	192709..192930	-	73	121602906	-	BARBAKC583_0185	-	hypothetical protein
184	 43.68	+1	192958..193614	-	218	121601674	-	BARBAKC583_0186	-	hypothetical protein
185	 51.08	+2	193655..196021	-	788	121602385	-	BARBAKC583_0187	-	putative DNA primase/helicase
186	 43.33	+1	196703..196822	+	39	121601653	-	BARBAKC583_0189	-	hypothetical protein
187	 46.61	+1	196797..197813	-	338	121602601	-	BARBAKC583_0188	-	hypothetical protein
188	 54.85	+2	197896..198225	+	109	121602058	-	BARBAKC583_0190	-	hypothetical protein
189	 30.95	-1	198315..198440	+	41	121602428	-	BARBAKC583_0191	-	hypothetical protein
190	 40.95	0	198720..199034	+	104	121601912	-	BARBAKC583_0192	-	hypothetical protein
191	 41.79	0	199345..199758	+	137	121601711	-	BARBAKC583_0193	-	hypothetical protein
192	 47.62	+2	199764..199952	+	62	121602420	-	BARBAKC583_0194	-	hypothetical protein
193	 42.79	0	199958..200158	+	66	121602781	-	BARBAKC583_0195	-	hypothetical protein
194	 45.80	+1	200489..201226	+	245	121602812	-	BARBAKC583_0196	-	putative exonuclease
195	 52.08	+2	201257..201400	+	47	121602277	-	BARBAKC583_0197	-	hypothetical protein
196	 33.33	-1	202279..202434	-	51	121601927	-	BARBAKC583_0199	-	hypothetical protein
197	 36.26	0	202405..202575	+	56	121602188	-	BARBAKC583_0200	-	hypothetical protein
198	 47.30	+2	202726..204021	+	431	121602447	murA	BARBAKC583_0201	-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase
199	 44.99	+1	204599..205447	-	282	121601893	-	BARBAKC583_0202	-	hypothetical protein
200	 44.29	+1	205450..206088	-	212	121602028	-	BARBAKC583_0203	-	5,10-methenyltetrahydrofolate synthetase
201	 44.44	+1	207002..207640	-	212	121602717	-	BARBAKC583_0204	-	TPR repeat-containing protein
202	 45.24	+1	208027..208152	-	41	121602010	rpmJ	BARBAKC583_0205	-	50S ribosomal protein L36
203	 46.85	+1	208634..208855	-	73	121602790	-	BARBAKC583_0206	-	hypothetical protein
204	 49.79	+2	208863..209105	-	80	121602204	-	BARBAKC583_0207	-	hypothetical protein
205	 44.79	+1	209516..210667	-	383	121602783	purK	BARBAKC583_0208	-	phosphoribosylaminoimidazole carboxylase ATPase subunit
206	 49.00	+2	210676..211173	-	165	121601760	purE	BARBAKC583_0209	-	phosphoribosylaminoimidazole carboxylase, catalytic subunit
207	 51.22	+2	211621..211743	+	40	121602386	-	BARBAKC583_0210	-	hypothetical protein
208	 38.81	0	212182..212400	+	72	121602253	infA	BARBAKC583_0211	-	translation initiation factor IF-1
209	 42.68	0	212877..213539	+	220	121602672	maf2	BARBAKC583_0212	-	septum formation protein Maf
210	 44.26	+1	213698..213880	+	60	121601685	-	BARBAKC583_0213	-	hypothetical protein
211	 57.26	+2	214274..214390	+	38	121602376	-	BARBAKC583_0214	-	hypothetical protein
212	 39.47	0	214740..214853	+	37	121602139	-	BARBAKC583_0215	-	hypothetical protein
213	 45.10	+1	214858..217458	+	866	121602872	clpB	BARBAKC583_0216	-	chaperone ClpB
214	 42.42	0	217705..217902	+	65	121602890	-	BARBAKC583_0217	-	hypothetical protein
215	 43.06	0	218734..218949	+	71	121601688	-	BARBAKC583_0219	-	hypothetical protein
216	 44.78	+1	219843..220043	+	66	121602211	-	BARBAKC583_0221	-	hypothetical protein
217	 38.36	0	220520..220678	+	52	121602706	-	BARBAKC583_0223	-	hypothetical protein
218	 38.99	0	220931..221089	+	52	121601976	-	BARBAKC583_0224	-	hypothetical protein
219	 39.17	0	222089..222208	+	39	121602882	-	BARBAKC583_0225	-	hypothetical protein
220	 41.74	0	223488..223844	+	118	121602401	-	BARBAKC583_0226	-	hypothetical protein
221	 45.41	+1	225008..226216	+	402	121602586	-	BARBAKC583_0227	-	PBSX family phage terminase large subunit
222	 46.26	+1	226952..228838	+	628	121601756	-	BARBAKC583_0228	-	hypothetical protein
223	 45.82	+1	229424..230368	+	314	121602751	-	BARBAKC583_0229	-	hypothetical protein
224	 44.22	+1	230650..231825	+	391	121602056	-	BARBAKC583_0230	-	hypothetical protein
225	 47.62	+2	231904..232029	+	41	121601654	-	BARBAKC583_0231	-	hypothetical protein
226	 43.90	+1	232244..233227	+	327	121602546	-	BARBAKC583_0232	-	hypothetical protein
227	 44.67	+1	233396..234859	+	487	121602014	-	BARBAKC583_0233	-	hypothetical protein
228	 49.86	+2	234856..235890	+	344	121602759	-	BARBAKC583_0234	-	hypothetical protein
229	 43.94	+1	235887..237065	+	392	121602136	-	BARBAKC583_0235	-	hypothetical protein
230	 44.62	+1	237065..237259	+	64	121602853	-	BARBAKC583_0236	-	hypothetical protein
231	 44.10	+1	237259..237453	+	64	121602577	-	BARBAKC583_0237	-	hypothetical protein
232	 43.21	+1	237453..238424	+	323	121601916	-	BARBAKC583_0238	-	hypothetical protein
233	 38.54	0	238814..239101	+	95	121602030	-	BARBAKC583_0239	-	hypothetical protein
234	 45.85	+1	239158..239820	+	220	121602073	-	BARBAKC583_0240	-	phage lysozyme
235	 44.84	+1	239817..240068	+	83	121601804	-	BARBAKC583_0241	-	hypothetical protein
236	 36.17	0	240061..240201	+	46	121602528	-	BARBAKC583_0242	-	hypothetical protein
237	 33.07	-1	240712..241098	+	128	121602366	-	BARBAKC583_0243	-	hypothetical protein
238	 44.44	+1	241442..241558	+	38	121601763	-	BARBAKC583_0244	-	hypothetical protein
239	 36.00	0	241613..241837	+	74	121602789	-	BARBAKC583_0245	-	hypothetical protein
240	 27.91	-2	242017..242145	+	42	121602230	-	BARBAKC583_0246	-	hypothetical protein
241	 41.32	0	242345..242995	+	216	121602492	-	BARBAKC583_0247	-	hypothetical protein
242	 41.28	0	243152..243667	-	171	121601942	-	BARBAKC583_0248	-	hypothetical protein
243	 40.04	0	243884..244912	-	342	121602353	-	BARBAKC583_0249	-	sensor histidine kinase
244	 42.14	0	244912..245706	-	264	121601883	-	BARBAKC583_0250	-	two-component response regulator
245	 37.92	0	245912..246151	+	79	121602471	-	BARBAKC583_0251	-	hypothetical protein
246	 37.41	0	246542..246688	+	48	121602793	-	BARBAKC583_0253	-	hypothetical protein
247	 37.61	0	246688..246804	+	38	121601746	-	BARBAKC583_0254	-	hypothetical protein
248	 40.61	0	247061..248503	+	480	121602455	-	BARBAKC583_0255	-	sensor histidine kinase
249	 41.32	0	248644..250584	-	646	121601904	-	BARBAKC583_0256	-	M23 peptidase domain-containing protein
250	 40.38	0	250710..250865	-	51	121602036	-	BARBAKC583_0257	-	hypothetical protein
251	 41.45	0	258644..259111	+	155	121602124	-	BARBAKC583_0264	-	hypothetical protein
252	 35.01	0	259768..260124	-	118	121601783	-	BARBAKC583_0265	-	putative HTH-type transcriptional regulator ygjM
253	 34.06	-1	260121..260396	-	91	121602060	-	BARBAKC583_0266	-	hypothetical protein
254	 32.54	-1	260508..260633	-	41	121602915	-	BARBAKC583_0267	-	hypothetical protein
255	 28.33	-2	260690..260809	-	39	121602123	-	BARBAKC583_0268	-	hypothetical protein
256	 31.06	-1	261102..261233	-	43	121602850	-	BARBAKC583_0270	-	hypothetical protein
257	 40.17	0	261273..262427	+	384	121601651	-	BARBAKC583_0271	-	phosphoserine aminotransferase
258	 39.88	0	263748..264389	-	213	121602525	-	BARBAKC583_0273	-	resolvase/recombinase
259	 42.86	0	264605..264856	+	83	121602636	-	BARBAKC583_0274	-	putative DNA-binding transcriptional regulator
260	 42.11	0	264853..265251	+	132	121602619	-	BARBAKC583_0275	-	hypothetical protein
261	 44.88	+1	265664..265966	-	100	121601752	-	BARBAKC583_0276	-	putative addiction module antidote protein
262	 44.44	+1	265997..266320	-	107	121602412	-	BARBAKC583_0277	-	putative addiction module killer protein
263	 42.81	0	266629..266934	+	101	121602203	-	BARBAKC583_0278	-	hypothetical protein
264	 36.27	0	266931..267236	+	101	121602350	-	BARBAKC583_0279	-	hypothetical protein
265	 43.59	+1	267431..267664	+	77	121601646	-	BARBAKC583_0280	-	hypothetical protein
266	 29.82	-2	267624..267737	+	37	121602727	-	BARBAKC583_0282	-	hypothetical protein
267	 36.26	0	267730..268002	-	90	121602110	-	BARBAKC583_0281	-	hypothetical protein
268	 37.26	0	268002..268688	-	228	121602595	-	BARBAKC583_0283	-	putative partition protein ParA
269	 41.40	0	269682..270971	+	429	121602411	purA	BARBAKC583_0285	-	adenylosuccinate synthetase
270	 36.13	0	271223..272722	+	499	121602864	-	BARBAKC583_0286	-	hypothetical protein
271	 39.25	0	272773..273684	-	303	121602451	rpoH2	BARBAKC583_0287	-	RNA polymerase factor sigma-32
272	 40.85	0	273827..274837	-	336	121601705	-	BARBAKC583_0288	-	RluA family pseudouridine synthase
273	 40.04	0	274875..276305	-	476	121602647	-	BARBAKC583_0289	-	aldehyde dehydrogenase (NAD) family protein
274	 18.12	-2	276479..276616	+	45	121601909	-	BARBAKC583_0290	-	hypothetical protein
275	 38.64	0	276703..279321	+	872	121602778	-	BARBAKC583_0291	-	FtsK/SpoIIIE family protein
276	 34.29	-1	279902..280318	-	138	121602506	mscL	BARBAKC583_0292	-	large conductance mechanosensitive channel protein
39.00	MEAN

4.11	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.