IslandPathversion 1.0

IslandPath Analysis: Bartonella bacilliformis KC583



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 39.00 STD DEV: 4.11
Bartonella bacilliformis KC583, complete genome - 1..1445021
1283 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1047	 39.66	0	1162143..1163438	-	431	121601758	-	BARBAKC583_1125	-	putative flagellar motor protein
1048	 39.53	0	1163435..1164805	-	456	121602873	-	BARBAKC583_1126	-	chemotaxis protein
1049	 39.94	0	1164887..1165960	-	357	121602153	-	BARBAKC583_1127	-	putative flagellar motor protein MotB
1050	 40.42	0	1165957..1166718	-	253	121602175	-	BARBAKC583_1128	-	hypothetical protein
1051	 43.50	+1	1166740..1168401	-	553	121602745	fliF	BARBAKC583_1129	-	flagellar MS-ring protein
1052	 33.33	-1	1168521..1168640	+	39	121602026	-	BARBAKC583_1130	-	hypothetical protein
1053	 39.14	0	1171893..1174370	+	825	121602468	-	BARBAKC583_1132	-	outer membrane autotransporter
1054	 39.57	0	1174509..1177685	+	1058	121601856	-	BARBAKC583_1133	-	outer membrane autotransporter
1055	 40.86	0	1179074..1179817	-	247	121601713	fliP	BARBAKC583_1135	-	flagellar biosynthesis protein FliP
1056	 39.76	0	1179823..1180320	-	165	121602600	fliL	BARBAKC583_1136	-	flagellar basal body-associated protein FliL
1057	 41.41	0	1180414..1181106	-	230	121602817	flgH	BARBAKC583_1137	-	flagellar basal body L-ring protein
1058	 43.14	+1	1181171..1181935	-	254	121602427	-	BARBAKC583_1138	-	hypothetical protein
1059	 42.78	0	1182004..1183242	-	412	121602656	flgI	BARBAKC583_1139	-	flagellar basal body P-ring protein
1060	 43.36	+1	1183242..1183700	-	152	121602252	flgA	BARBAKC583_1140	-	flagellar basal body P-ring biosynthesis protein FlgA
1061	 44.53	+1	1183706..1184500	-	264	121602345	flgG	BARBAKC583_1141	-	flagellar basal body rod protein FlgG
1062	 42.64	0	1184552..1184884	-	110	121601933	fliE	BARBAKC583_1142	-	flagellar hook-basal body complex protein FliE
1063	 43.72	+1	1184961..1185374	-	137	121602485	flgC	BARBAKC583_1143	-	flagellar basal body rod protein FlgC
1064	 41.86	0	1185377..1185763	-	128	121601960	flgB	BARBAKC583_1144	-	flagellar basal body rod protein FlgB
1065	 44.55	+1	1186171..1187784	-	537	121602501	fliI	BARBAKC583_1145	-	flagellum-specific ATP synthase
1066	 47.48	+2	1187848..1188582	-	244	121601652	-	BARBAKC583_1146	-	putative flagellar basal-body rod protein FlgF
1067	 39.25	0	1188641..1189435	-	264	121601650	-	BARBAKC583_1147	-	hypothetical protein
1068	 41.17	0	1189699..1190604	+	301	121602234	motA	BARBAKC583_1148	-	lateral flagellar motor protein MotA
1069	 40.64	0	1190607..1191578	+	323	121602879	fliM	BARBAKC583_1149	-	flagellar motor switch protein FliM
1070	 41.62	0	1191559..1192101	+	180	121601973	-	BARBAKC583_1150	-	hypothetical protein
1071	 47.14	+1	1192288..1192707	+	139	121602197	fliY	BARBAKC583_1151	-	flagellar motor switch protein fliY
1072	 42.33	0	1192737..1193825	+	362	121602741	fliG	BARBAKC583_1152	-	flagellar motor switch protein G
1073	 39.12	0	1193988..1195058	+	356	121601720	flhB	BARBAKC583_1153	-	flagellar biosynthesis protein FlhB
1074	 36.02	0	1195165..1195647	+	160	121602291	-	BARBAKC583_1154	-	hypothetical protein
1075	 38.43	0	1196147..1196617	-	156	121602859	-	BARBAKC583_1155	-	hypothetical protein
1076	 39.64	0	1196614..1197057	-	147	121601993	-	BARBAKC583_1156	-	hypothetical protein
1077	 39.86	0	1197169..1197750	-	193	121602730	-	BARBAKC583_1157	-	hypothetical protein
1078	 36.18	0	1198208..1198594	-	128	121601843	-	BARBAKC583_1158	-	hypothetical protein
1079	 41.10	0	1198598..1199395	-	265	121602553	fliR	BARBAKC583_1159	-	flagellar biosynthesis protein FliR
1080	 43.50	+1	1199410..1201494	-	694	121601670	flhA	BARBAKC583_1160	-	flagellar biosynthesis protein FlhA
1081	 35.96	0	1201958..1202071	+	37	121602292	-	BARBAKC583_1161	-	hypothetical protein
1082	 41.82	0	1202354..1202683	+	109	121601915	-	BARBAKC583_1162	-	hypothetical protein
1083	 38.10	0	1202776..1202943	+	55	121601939	-	BARBAKC583_1164	-	hypothetical protein
1084	 41.69	0	1202927..1203919	-	330	121602494	ribF	BARBAKC583_1163	-	bifunctional riboflavin kinase/FMN adenylyltransferase
1085	 43.14	+1	1203919..1204764	-	281	121602365	-	BARBAKC583_1165	-	HAD family hydrolase
1086	 41.65	0	1205531..1207093	+	520	121601768	mviN	BARBAKC583_1166	-	integral membrane protein MviN
1087	 41.83	0	1207175..1208245	+	356	121601996	trpS	BARBAKC583_1167	-	tryptophanyl-tRNA synthetase
1088	 29.91	-2	1208673..1208789	-	38	121602908	-	BARBAKC583_1168	-	hypothetical protein
1089	 43.52	+1	1210533..1211111	+	192	121601928	-	BARBAKC583_1170	-	NifU family protein
1090	 38.21	0	1211525..1211647	-	40	121602691	-	BARBAKC583_1171	-	hypothetical protein
1091	 43.30	+1	1211789..1213423	-	544	121602875	groEL	BARBAKC583_1172	-	chaperonin GroEL
1092	 44.78	+1	1213479..1213775	-	98	121601908	groES	BARBAKC583_1173	-	co-chaperonin GroES
1093	 43.99	+1	1214058..1215446	+	462	121602319	fumC	BARBAKC583_1174	-	fumarate hydratase
1094	 43.46	+1	1215491..1217119	-	542	121602678	-	BARBAKC583_1175	-	phosphoglucomutase
1095	 40.53	0	1217317..1217844	+	175	121602101	-	BARBAKC583_1176	-	putative peroxiredoxin
1096	 33.33	-1	1217862..1217981	-	39	121602818	-	BARBAKC583_1177	-	hypothetical protein
1097	 42.59	0	1218053..1219543	-	496	121602225	hisS	BARBAKC583_1178	-	histidyl-tRNA synthetase
1098	 31.52	-1	1219787..1219951	-	54	121602364	-	BARBAKC583_1179	-	hypothetical protein
1099	 40.36	0	1220076..1222010	+	644	121601789	-	BARBAKC583_1180	-	hypothetical protein
1100	 39.87	0	1221988..1222140	+	50	121602775	-	BARBAKC583_1181	-	hypothetical protein
1101	 41.81	0	1222382..1222888	-	168	121602343	-	BARBAKC583_1182	-	hypothetical protein
1102	 40.98	0	1223631..1225553	+	640	121602442	-	BARBAKC583_1183	-	hypothetical protein
1103	 40.82	0	1225871..1226017	-	48	121601689	-	BARBAKC583_1184	-	hypothetical protein
1104	 40.13	0	1227258..1227566	-	102	121602243	-	BARBAKC583_1187	-	hypothetical protein
1105	 39.32	0	1230094..1230210	-	38	121602092	-	BARBAKC583_1189	-	hypothetical protein
1106	 39.02	0	1230210..1232144	+	644	121602182	-	BARBAKC583_1190	-	hypothetical protein
1107	 37.07	0	1232586..1233521	+	311	121602895	gpsA	BARBAKC583_1191	-	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
1108	 38.10	0	1234097..1235524	-	475	121602005	pheP	BARBAKC583_1192	-	phenylalanine-specific permease PheP
1109	 40.72	0	1236145..1236699	-	184	121602764	bioY	BARBAKC583_1193	-	biotin transport protein BioY
1110	 35.78	0	1236696..1237349	-	217	121602496	-	BARBAKC583_1194	-	putative biotin ABC transporter, permease protein
1111	 34.95	0	1237346..1238026	-	226	121601922	-	BARBAKC583_1195	-	putative biotin ABC transporter, ATP-binding protein BioM
1112	 35.71	0	1238072..1239499	-	475	121602408	aroP	BARBAKC583_1196	-	aromatic amino acid transport protein AroP
1113	 38.46	0	1239821..1239937	-	38	121601733	-	BARBAKC583_1197	-	hypothetical protein
1114	 38.50	0	1241514..1242617	-	367	121601664	dcd	BARBAKC583_1200	-	2'-deoxycytidine 5'-triphosphate deaminase
1115	 41.23	0	1242933..1244768	+	611	121602207	mutL	BARBAKC583_1201	-	DNA mismatch repair protein
1116	 34.62	-1	1244890..1245123	+	77	121602772	-	BARBAKC583_1202	-	hypothetical protein
1117	 39.41	0	1245173..1246192	-	339	121601998	lpxK	BARBAKC583_1203	-	tetraacyldisaccharide 4'-kinase
1118	 37.91	0	1246196..1247506	-	436	121602543	kdtA	BARBAKC583_1204	-	3-deoxy-D-manno-octulosonic-acid transferase
1119	 39.29	0	1247520..1248275	-	251	121601847	-	BARBAKC583_1205	-	hypothetical protein
1120	 34.19	-1	1248358..1248591	-	77	121602438	-	BARBAKC583_1206	-	hypothetical protein
1121	 40.39	0	1249426..1250757	-	443	121601889	-	BARBAKC583_1208	-	TldD/PmbA family protein
1122	 41.76	0	1251214..1251771	-	185	121602303	-	BARBAKC583_1209	-	putative methyltransferase
1123	 38.80	0	1251752..1253251	-	499	121601745	-	BARBAKC583_1210	-	RNA pseudouridine synthase
1124	 43.85	+1	1253413..1253859	+	148	121602446	-	BARBAKC583_1211	-	cytidine and deoxycytidylate deaminase zinc-binding protein
1125	 39.81	0	1254328..1257243	-	971	121601879	ileS	BARBAKC583_1212	-	isoleucyl-tRNA synthetase
1126	 40.94	0	1257486..1258340	-	284	121602037	-	BARBAKC583_1213	-	omp25/ropB family outer membrane protein
1127	 42.97	0	1258483..1259385	-	300	121602865	-	BARBAKC583_1214	-	omp25/ropB family outer membrane protein
1128	 37.83	0	1259526..1260371	-	281	121602149	-	BARBAKC583_1215	-	omp25/ropB family outer membrane protein
1129	 37.00	0	1260812..1261138	-	108	121602383	-	BARBAKC583_1216	-	hypothetical protein
1130	 38.30	0	1261996..1263909	+	637	121601645	-	BARBAKC583_1217	-	hypothetical protein
1131	 32.46	-1	1263890..1264003	+	37	121601637	-	BARBAKC583_1218	-	hypothetical protein
1132	 37.36	0	1264067..1264687	-	206	121602332	-	BARBAKC583_1219	-	3'-5' exonuclease domain-containing protein
1133	 39.48	0	1264659..1266074	-	471	121601716	-	BARBAKC583_1220	-	hypothetical protein
1134	 38.47	0	1266148..1267023	-	291	121602138	mutM	BARBAKC583_1221	-	formamidopyrimidine-DNA glycosylase
1135	 40.85	0	1267071..1268321	-	416	121602856	-	BARBAKC583_1222	-	metalloprotease
1136	 39.06	0	1268349..1269203	-	284	121602731	-	BARBAKC583_1223	-	cell wall hydrolase family protein
1137	 37.62	0	1269493..1270215	-	240	121601959	phoU	BARBAKC583_1224	-	phosphate transport system regulatory protein PhoU
1138	 39.92	0	1270238..1270996	-	252	121602785	pstB	BARBAKC583_1225	-	phosphate ABC transporter, ATP-binding protein
1139	 39.29	0	1271037..1272329	-	430	121602070	pstA	BARBAKC583_1226	-	phosphate ABC transporter, permease protein PstA
1140	 38.06	0	1272326..1273786	-	486	121601770	pstC	BARBAKC583_1227	-	phosphate ABC transporter, permease protein PstC
1141	 38.30	0	1273849..1274895	-	348	121602675	pstS	BARBAKC583_1228	-	phosphate ABC transporter, periplasmic phosphate-binding protein
1142	 38.87	0	1275042..1275980	-	312	121602356	gshB	BARBAKC583_1229	-	glutathione synthetase
1143	 39.04	0	1276069..1276857	+	262	121602481	-	BARBAKC583_1231	-	molybdopterin biosynthesis protein MoeB
1144	 33.33	-1	1277527..1277655	-	42	121601911	-	BARBAKC583_1232	-	hypothetical protein
1145	 38.53	0	1279398..1279955	-	185	121602041	-	BARBAKC583_1235	-	cytochrome c family protein
1146	 40.03	0	1280060..1280791	+	243	121602753	kdsB	BARBAKC583_1236	-	3-deoxy-manno-octulosonate cytidylyltransferase
39.00	MEAN

4.11	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.