IslandPathversion 1.0

IslandPath Analysis: Bartonella bacilliformis KC583



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 39.00 STD DEV: 4.11
Bartonella bacilliformis KC583, complete genome - 1..1445021
1283 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1010	 37.47	0	1114927..1115313	+	128	121601703	-	BARBAKC583_1087	-	putative transcriptional regulator
1011	 40.29	0	1115432..1116538	+	368	121602426	-	BARBAKC583_1088	-	MFP family transporter
1012	 37.83	0	1116549..1118126	+	525	121601825	-	BARBAKC583_1089	-	EmrB/QacA family drug resistance transporter
1013	 41.71	0	1118676..1119809	-	377	121602552	-	BARBAKC583_1090	-	pyridoxal-dependent decarboxylase
1014	 40.09	0	1120463..1121380	-	305	121602233	-	BARBAKC583_1091	-	rhodanese-like domain-containing protein
1015	 39.59	0	1121666..1122496	-	276	121602806	fpr	BARBAKC583_1092	-	ferredoxin---NADP reductase
1016	 41.98	0	1123120..1124241	+	373	121602454	alr	BARBAKC583_1093	-	alanine racemase
1017	 42.27	0	1124711..1127506	-	931	121602018	gcvP	BARBAKC583_1094	-	glycine dehydrogenase
1018	 40.11	0	1127512..1127880	-	122	121602585	gcvH	BARBAKC583_1095	-	glycine cleavage system protein H
1019	 42.78	0	1127887..1129008	-	373	121601850	gcvT	BARBAKC583_1096	-	glycine cleavage system aminomethyltransferase T
1020	 40.27	0	1129814..1130476	+	220	121602157	-	BARBAKC583_1097	-	ATP-dependent protease
1021	 40.68	0	1130490..1130666	+	58	121602896	-	BARBAKC583_1098	-	hypothetical protein
1022	 43.59	+1	1132553..1132708	+	51	121602226	-	BARBAKC583_1099	-	hypothetical protein
1023	 31.03	-1	1132722..1132895	+	57	121601774	-	BARBAKC583_1100	-	hypothetical protein
1024	 40.79	0	1135604..1136635	+	343	121602771	asd	BARBAKC583_1101	-	aspartate-semialdehyde dehydrogenase
1025	 38.34	0	1137343..1138161	+	272	121602075	metQ	BARBAKC583_1102	-	D-methionine ABC transporter, periplasmic methionine-binding protein
1026	 39.03	0	1138168..1139202	+	344	121601979	metN	BARBAKC583_1103	-	D-methionine ABC transporter, ATP-binding protein
1027	 41.36	0	1139195..1139854	+	219	121602709	metI	BARBAKC583_1104	-	D-methionine ABC transporter, permease protein
1028	 38.54	0	1139860..1140339	-	159	121602414	nodN	BARBAKC583_1105	-	nodulation protein N
1029	 42.91	0	1140509..1141834	+	441	121601844	-	BARBAKC583_1106	-	putative oxidoreductase, NAD-binding
1030	 37.63	0	1142137..1142880	+	247	121601642	-	BARBAKC583_1108	-	creatininase
1031	 29.86	-2	1142853..1142996	-	47	121602845	-	BARBAKC583_1107	-	hypothetical protein
1032	 40.12	0	1143225..1146806	-	1193	121602855	-	BARBAKC583_1109	-	outer membrane autotransporter
1033	 39.30	0	1146935..1148845	-	636	121602096	-	BARBAKC583_1110	-	hypothetical protein
1034	 40.04	0	1150047..1150970	+	307	121602561	-	BARBAKC583_1111	-	iron chelate ABC transporter, periplasmic iron-binding protein
1035	 40.65	0	1151069..1152025	+	318	121602643	-	BARBAKC583_1112	-	iron chelate ABC transporter, permease protein
1036	 34.81	-1	1152018..1152968	+	316	121602612	-	BARBAKC583_1113	-	iron chelate ABC transporter, permease protein
1037	 39.00	0	1152965..1153723	+	252	121601690	-	BARBAKC583_1114	-	iron chelate ABC transporter, ATP-binding protein
1038	 38.95	0	1154995..1155261	-	88	121602368	fliQ	BARBAKC583_1116	-	flagellar biosynthesis protein FliQ
1039	 40.31	0	1155258..1155830	-	190	121602800	flgD	BARBAKC583_1117	-	flagellar hook capping protein
1040	 32.61	-1	1155848..1156264	-	138	121602894	flbT	BARBAKC583_1118	-	flagellar biosynthesis repressor FlbT
1041	 38.48	0	1156311..1156679	-	122	121602017	flaF	BARBAKC583_1119	-	flagellar biosynthesis regulatory protein FlaF
1042	 39.24	0	1156699..1157781	-	360	121602544	flgL	BARBAKC583_1120	-	flagellar hook-associated protein FlgL
1043	 42.52	0	1157789..1159159	-	456	121601813	flgK	BARBAKC583_1121	-	flagellar hook-associated protein FlgK
1044	 40.33	0	1159187..1160401	-	404	121601827	flgE	BARBAKC583_1122	-	flagellar hook protein FlgE
1045	 40.90	0	1160642..1161328	-	228	121602724	-	BARBAKC583_1123	-	DNA-binding response regulator
1046	 39.09	0	1161608..1162180	-	190	121602493	-	BARBAKC583_1124	-	transglycosylase
1047	 39.66	0	1162143..1163438	-	431	121601758	-	BARBAKC583_1125	-	putative flagellar motor protein
1048	 39.53	0	1163435..1164805	-	456	121602873	-	BARBAKC583_1126	-	chemotaxis protein
1049	 39.94	0	1164887..1165960	-	357	121602153	-	BARBAKC583_1127	-	putative flagellar motor protein MotB
1050	 40.42	0	1165957..1166718	-	253	121602175	-	BARBAKC583_1128	-	hypothetical protein
1051	 43.50	+1	1166740..1168401	-	553	121602745	fliF	BARBAKC583_1129	-	flagellar MS-ring protein
1052	 33.33	-1	1168521..1168640	+	39	121602026	-	BARBAKC583_1130	-	hypothetical protein
1053	 39.14	0	1171893..1174370	+	825	121602468	-	BARBAKC583_1132	-	outer membrane autotransporter
1054	 39.57	0	1174509..1177685	+	1058	121601856	-	BARBAKC583_1133	-	outer membrane autotransporter
1055	 40.86	0	1179074..1179817	-	247	121601713	fliP	BARBAKC583_1135	-	flagellar biosynthesis protein FliP
1056	 39.76	0	1179823..1180320	-	165	121602600	fliL	BARBAKC583_1136	-	flagellar basal body-associated protein FliL
1057	 41.41	0	1180414..1181106	-	230	121602817	flgH	BARBAKC583_1137	-	flagellar basal body L-ring protein
1058	 43.14	+1	1181171..1181935	-	254	121602427	-	BARBAKC583_1138	-	hypothetical protein
1059	 42.78	0	1182004..1183242	-	412	121602656	flgI	BARBAKC583_1139	-	flagellar basal body P-ring protein
1060	 43.36	+1	1183242..1183700	-	152	121602252	flgA	BARBAKC583_1140	-	flagellar basal body P-ring biosynthesis protein FlgA
1061	 44.53	+1	1183706..1184500	-	264	121602345	flgG	BARBAKC583_1141	-	flagellar basal body rod protein FlgG
1062	 42.64	0	1184552..1184884	-	110	121601933	fliE	BARBAKC583_1142	-	flagellar hook-basal body complex protein FliE
1063	 43.72	+1	1184961..1185374	-	137	121602485	flgC	BARBAKC583_1143	-	flagellar basal body rod protein FlgC
1064	 41.86	0	1185377..1185763	-	128	121601960	flgB	BARBAKC583_1144	-	flagellar basal body rod protein FlgB
1065	 44.55	+1	1186171..1187784	-	537	121602501	fliI	BARBAKC583_1145	-	flagellum-specific ATP synthase
1066	 47.48	+2	1187848..1188582	-	244	121601652	-	BARBAKC583_1146	-	putative flagellar basal-body rod protein FlgF
1067	 39.25	0	1188641..1189435	-	264	121601650	-	BARBAKC583_1147	-	hypothetical protein
1068	 41.17	0	1189699..1190604	+	301	121602234	motA	BARBAKC583_1148	-	lateral flagellar motor protein MotA
1069	 40.64	0	1190607..1191578	+	323	121602879	fliM	BARBAKC583_1149	-	flagellar motor switch protein FliM
1070	 41.62	0	1191559..1192101	+	180	121601973	-	BARBAKC583_1150	-	hypothetical protein
1071	 47.14	+1	1192288..1192707	+	139	121602197	fliY	BARBAKC583_1151	-	flagellar motor switch protein fliY
1072	 42.33	0	1192737..1193825	+	362	121602741	fliG	BARBAKC583_1152	-	flagellar motor switch protein G
1073	 39.12	0	1193988..1195058	+	356	121601720	flhB	BARBAKC583_1153	-	flagellar biosynthesis protein FlhB
1074	 36.02	0	1195165..1195647	+	160	121602291	-	BARBAKC583_1154	-	hypothetical protein
1075	 38.43	0	1196147..1196617	-	156	121602859	-	BARBAKC583_1155	-	hypothetical protein
1076	 39.64	0	1196614..1197057	-	147	121601993	-	BARBAKC583_1156	-	hypothetical protein
1077	 39.86	0	1197169..1197750	-	193	121602730	-	BARBAKC583_1157	-	hypothetical protein
1078	 36.18	0	1198208..1198594	-	128	121601843	-	BARBAKC583_1158	-	hypothetical protein
1079	 41.10	0	1198598..1199395	-	265	121602553	fliR	BARBAKC583_1159	-	flagellar biosynthesis protein FliR
1080	 43.50	+1	1199410..1201494	-	694	121601670	flhA	BARBAKC583_1160	-	flagellar biosynthesis protein FlhA
1081	 35.96	0	1201958..1202071	+	37	121602292	-	BARBAKC583_1161	-	hypothetical protein
1082	 41.82	0	1202354..1202683	+	109	121601915	-	BARBAKC583_1162	-	hypothetical protein
1083	 38.10	0	1202776..1202943	+	55	121601939	-	BARBAKC583_1164	-	hypothetical protein
1084	 41.69	0	1202927..1203919	-	330	121602494	ribF	BARBAKC583_1163	-	bifunctional riboflavin kinase/FMN adenylyltransferase
1085	 43.14	+1	1203919..1204764	-	281	121602365	-	BARBAKC583_1165	-	HAD family hydrolase
1086	 41.65	0	1205531..1207093	+	520	121601768	mviN	BARBAKC583_1166	-	integral membrane protein MviN
1087	 41.83	0	1207175..1208245	+	356	121601996	trpS	BARBAKC583_1167	-	tryptophanyl-tRNA synthetase
1088	 29.91	-2	1208673..1208789	-	38	121602908	-	BARBAKC583_1168	-	hypothetical protein
1089	 43.52	+1	1210533..1211111	+	192	121601928	-	BARBAKC583_1170	-	NifU family protein
1090	 38.21	0	1211525..1211647	-	40	121602691	-	BARBAKC583_1171	-	hypothetical protein
1091	 43.30	+1	1211789..1213423	-	544	121602875	groEL	BARBAKC583_1172	-	chaperonin GroEL
1092	 44.78	+1	1213479..1213775	-	98	121601908	groES	BARBAKC583_1173	-	co-chaperonin GroES
1093	 43.99	+1	1214058..1215446	+	462	121602319	fumC	BARBAKC583_1174	-	fumarate hydratase
1094	 43.46	+1	1215491..1217119	-	542	121602678	-	BARBAKC583_1175	-	phosphoglucomutase
1095	 40.53	0	1217317..1217844	+	175	121602101	-	BARBAKC583_1176	-	putative peroxiredoxin
1096	 33.33	-1	1217862..1217981	-	39	121602818	-	BARBAKC583_1177	-	hypothetical protein
1097	 42.59	0	1218053..1219543	-	496	121602225	hisS	BARBAKC583_1178	-	histidyl-tRNA synthetase
1098	 31.52	-1	1219787..1219951	-	54	121602364	-	BARBAKC583_1179	-	hypothetical protein
1099	 40.36	0	1220076..1222010	+	644	121601789	-	BARBAKC583_1180	-	hypothetical protein
1100	 39.87	0	1221988..1222140	+	50	121602775	-	BARBAKC583_1181	-	hypothetical protein
1101	 41.81	0	1222382..1222888	-	168	121602343	-	BARBAKC583_1182	-	hypothetical protein
1102	 40.98	0	1223631..1225553	+	640	121602442	-	BARBAKC583_1183	-	hypothetical protein
1103	 40.82	0	1225871..1226017	-	48	121601689	-	BARBAKC583_1184	-	hypothetical protein
1104	 40.13	0	1227258..1227566	-	102	121602243	-	BARBAKC583_1187	-	hypothetical protein
1105	 39.32	0	1230094..1230210	-	38	121602092	-	BARBAKC583_1189	-	hypothetical protein
1106	 39.02	0	1230210..1232144	+	644	121602182	-	BARBAKC583_1190	-	hypothetical protein
1107	 37.07	0	1232586..1233521	+	311	121602895	gpsA	BARBAKC583_1191	-	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
1108	 38.10	0	1234097..1235524	-	475	121602005	pheP	BARBAKC583_1192	-	phenylalanine-specific permease PheP
1109	 40.72	0	1236145..1236699	-	184	121602764	bioY	BARBAKC583_1193	-	biotin transport protein BioY
39.00	MEAN

4.11	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.