IslandPath Analysis: Azoarcus sp. BH72



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 67.83   STD DEV: 4.13
Azoarcus sp. BH72, complete genome - 1..4376040
3989 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
815	 68.87	0	871799..872206	-	135	119897107	rnk	azo0816	-	putative regulator of nucleoside diphosphate kinase
816	 66.07	0	872316..872990	+	224	119897108	hisG	azo0817	-	ATP phosphoribosyltransferase catalytic subunit
817	 68.65	0	872987..874297	+	436	119897109	hisD	azo0818	-	histidinol dehydrogenase
818	 70.53	0	874352..875542	-	396	119897110	aspC	azo0819	-	hypothetical protein
819	 64.72	0	875655..877499	-	614	119897111	pckG	azo0820	-	phosphoenolpyruvate carboxykinase
820	 66.80	0	877831..880107	+	758	119897112	maeB1	azo0821	-	malic enzyme
821	 69.39	0	880162..881298	+	378	119897113	-	azo0822	-	hypothetical protein
822	 66.31	0	881699..882541	+	280	119897114	pbpG	azo0823	-	D-alanyl-D-alanine carboxypeptidase
823	 67.66	0	882604..883407	-	267	119897115	allR	azo0824	-	negative regulator of allantoin and glyoxylate utilization operons
824	 73.87	+1	883506..883727	+	73	119897116	-	azo0825	-	hypothetical protein
825	 70.98	0	883724..884674	+	316	119897117	-	azo0826	-	glycerate dehydrogenase
826	 65.87	0	884876..886135	+	419	119897118	-	azo0827	-	hypothetical protein
827	 75.78	+1	886288..887790	+	500	119897119	-	azo0828	-	pseudouridylate synthase
828	 66.67	0	887858..888337	-	159	119897120	nuoB1	azo0829	-	NADH-quinone oxidoreductase chain B
829	 71.41	0	888370..889254	-	294	119897121	-	azo0830	-	AraC family transcriptional regulator
830	 69.26	0	889332..889562	-	76	119897122	-	azo0831	-	hypothetical protein
831	 71.67	0	890060..891259	-	399	119897123	-	azo0832	-	ABC transporter permease protein
832	 72.29	+1	891269..892477	-	402	119897124	-	azo0833	-	ABC transporter permease protein
833	 71.19	0	892474..893181	-	235	119897125	-	azo0834	-	ABC transporter ATP-binding protein
834	 72.15	+1	893195..894343	-	382	119897126	-	azo0835	-	membrane fusion protein
835	 66.49	0	894555..896288	-	577	119897127	glnS	azo0836	-	glutaminyl-tRNA synthetase
836	 69.01	0	896453..896836	+	127	119897128	-	azo0837	-	CrcB family protein
837	 72.15	+1	896956..897630	+	224	119897129	-	azo0838	-	outer membrane protein
838	 71.13	0	897685..900981	-	1098	119897130	-	azo0839	-	SWI/SNF family helicase
839	 65.36	0	901163..903079	-	638	119897131	thiC	azo0840	-	thiamine biosynthesis protein ThiC
840	 69.12	0	903169..904023	-	284	119897132	thiD1	azo0841	-	phosphomethylpyrimidine kinase
841	 72.97	+1	904277..905893	+	538	119897133	ecaA	azo0842	-	putative carbonic anhydrase precursor
842	 69.16	0	905906..907309	-	467	119897134	-	azo0843	-	putative transcriptional regulator
843	 74.56	+1	907471..907926	+	151	119897135	-	azo0844	-	hypothetical protein
844	 68.88	0	908009..908686	+	225	119897136	-	azo0845	-	putative transcriptional regulator
845	 73.19	+1	908683..909771	+	362	119897137	-	azo0846	-	membrane fusion protein
846	 67.85	0	909768..912986	+	1072	119897138	-	azo0847	-	RND efflux transporter, permease protein
847	 66.21	0	913062..913715	+	217	119897139	pcm1	azo0848	-	putative protein-L-isoaspartate O-methyltransferase
848	 66.05	0	913724..914047	+	107	119897140	-	azo0849	-	putative sulfurtransferase protein
849	 69.70	0	914066..915382	+	438	119897141	tolC	azo0850	-	putative outer membrane efflux protein
850	 73.41	+1	915379..916623	-	414	119897142	waaA	azo0851	-	3-deoxy-D-manno-octulosonic-acid transferase
851	 64.78	0	916809..917816	+	335	119897143	wbnF	azo0852	-	putative nucleotide sugar epimerase
852	 68.92	0	917838..918635	+	265	119897144	apaH	azo0853	-	diadenosine tetraphosphatase
853	 71.46	0	918645..919436	-	263	119897145	plsC	azo0854	-	putative 1-acyl-sn-glycerol-3-phosphate acyltransferase
854	 66.14	0	919508..920266	-	252	119897146	-	azo0855	-	hypothetical protein
855	 71.31	0	920383..921654	+	423	119897147	-	azo0856	-	glycosyltransferase
856	 66.45	0	921718..922653	+	311	119897148	-	azo0857	-	putative carbohydrate kinase
857	 71.94	0	922647..923120	+	157	119897149	slyB	azo0858	-	putative outer membrane protein SlyB
858	 67.94	0	923122..923514	-	130	119897150	dgkA	azo0859	-	diacylglycerol kinase
859	 70.85	0	923623..924912	-	429	119897151	-	azo0860	-	hypothetical protein
860	 69.38	0	924919..925803	-	294	119897152	prmA	azo0861	-	ribosomal protein L11 methyltransferase
861	 64.83	0	925814..927175	-	453	119897153	accC1	azo0862	-	acetyl-CoA carboxylase biotin carboxylase subunit
862	 73.64	+1	927168..927296	-	42	119897154	-	azo0863	-	hypothetical protein
863	 64.90	0	927305..927757	-	150	119897155	accB	azo0864	-	biotin carboxyl carrier protein of acetyl-CoA carboxylase
864	 66.06	0	927813..928310	-	165	119897156	aroQ	azo0865	-	3-dehydroquinate dehydratase
865	 67.23	0	928372..928908	-	178	119897157	-	azo0866	-	putative thioredoxin
866	 68.99	0	928905..929594	-	229	119897158	-	azo0867	-	hypothetical protein
867	 68.52	0	929650..930996	+	448	119897159	mpl	azo0868	-	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase
868	 66.36	0	931018..931668	-	216	119897160	-	azo0869	-	hypothetical protein
869	 65.49	0	931665..932258	-	197	119897161	gmhA	azo0870	-	putative phosphoheptose isomerase
870	 71.01	0	932374..932787	-	137	119897162	-	azo0871	-	hypothetical protein
871	 69.26	0	932786..933673	+	295	119897163	-	azo0872	-	hypothetical protein
872	 68.99	0	933728..934762	+	344	119897164	pyrC	azo0873	-	dihydroorotase
873	 68.75	0	934759..935190	+	143	119897165	-	azo0874	-	hypothetical protein
874	 66.44	0	935993..936436	+	147	119897166	mraZ	azo0875	-	cell division protein MraZ
875	 68.58	0	936433..937371	+	312	119897167	mraW	azo0876	-	SAM dependent methyltransferase
876	 68.56	0	937368..937631	+	87	119897168	FtsL	azo0877	-	putative cell division protein FtsL
877	 67.80	0	937628..939388	+	586	119897169	FtsI	azo0878	-	peptidoglycan glycosyltransferase
878	 70.39	0	939385..940890	+	501	119897170	murE	azo0879	-	UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase
879	 70.08	0	940863..942299	+	478	119897171	murF	azo0880	-	UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanine ligase
880	 66.57	0	942301..943389	+	362	119897172	mraY	azo0881	-	phospho-N-acetylmuramoyl-pentapeptide transferase
881	 72.87	+1	943386..944804	+	472	119897173	murD	azo0882	-	UDP-N-acetylmuramoylalanine-D-glutamate ligase
882	 66.67	0	944801..946033	+	410	119897174	FtsW	azo0883	-	cell division protein FtsW
883	 71.34	0	946030..947100	+	356	119897175	murG	azo0884	-	N-acetylglucosaminyl transferase
884	 68.87	0	947097..948500	+	467	119897176	murC	azo0885	-	UDP-N-acetylmuramate--L-alanine ligase
885	 68.52	0	948497..949411	+	304	119897177	ddl	azo0886	-	D-alanine--D-alanine ligase
886	 71.24	0	949404..950234	+	276	119897178	FtsQ	azo0887	-	putative cell division protein FtsQ
887	 66.59	0	950231..951460	+	409	119897179	FtsA	azo0888	-	cell division protein FtsA
888	 67.54	0	951602..952744	+	380	119897180	FtsZ	azo0889	-	cell division protein FtsZ
889	 66.02	0	952910..953833	+	307	119897181	lpxC	azo0890	-	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
890	 66.67	0	953868..954056	+	62	119897182	-	azo0891	-	hypothetical protein
891	 72.03	+1	954061..954489	-	142	119897183	-	azo0892	-	hypothetical protein
892	 64.65	0	954595..957324	+	909	119897184	secA	azo0893	-	preprotein translocase subunit SecA
893	 70.99	0	957401..958882	+	493	119897185	-	azo0894	-	GAF-domain-containing protein
894	 68.60	0	958968..960209	+	413	119897186	argJ	azo0895	-	bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein
895	 69.68	0	960324..961154	+	276	119897187	-	azo0896	-	putative phosphoprotein phosphatase
896	 71.76	0	961167..962186	+	339	119897188	-	azo0897	-	hypothetical protein
897	 68.71	0	962191..963855	-	554	119897189	-	azo0898	-	putative serine/threonine protein kinase
898	 69.73	0	963863..964384	-	173	119897190	-	azo0899	-	hypothetical protein
899	 65.10	0	964488..964871	-	127	119897191	apaG	azo0900	-	ApaG
900	 65.14	0	965057..966433	+	458	119897192	purB	azo0901	-	adenylosuccinate lyase
901	 65.09	0	966512..966829	+	105	119897193	-	azo0902	-	hypothetical protein
902	 63.67	-1	966923..967855	-	310	119897194	secF	azo0903	-	preprotein translocase subunit SecF
903	 67.73	0	967876..969750	-	624	119897195	secD	azo0904	-	preprotein translocase subunit SecD
904	 62.73	-1	969851..970180	-	109	119897196	yajC	azo0905	-	preprotein translocase subunit YajC
905	 67.86	0	970362..971201	+	279	119897197	-	azo0906	-	putative signal transduction protein
906	 66.22	0	971214..972326	-	370	119897198	tgt	azo0907	-	queuine tRNA-ribosyltransferase
907	 68.79	0	972316..973353	-	345	119897199	queA	azo0908	-	S-adenosylmethionine:tRNA ribosyltransferase-isomerase
908	 68.19	0	973554..974405	-	283	119897200	nhaR	azo0909	-	LysR family transcriptional regulator
909	 66.37	0	974584..974925	+	113	119897201	-	azo0910	-	hypothetical protein
910	 61.26	-1	974987..975652	+	221	119897202	yccA	azo0911	-	carrier/transport protein
911	 65.97	0	975796..977517	+	573	119897203	rosB	azo0912	-	putative potassium/proton antiporter
912	 65.47	0	977524..978858	-	444	119897204	ytfL2	azo0913	-	hemolysin
913	 63.66	-1	979395..980357	+	320	119897205	terC	azo0914	-	putative tellurium resistance protein
914	 63.25	-1	980435..981400	+	321	119897206	accA	azo0915	-	acetyl-CoA carboxylase carboxyltransferase subunit alpha
67.83	MEAN

4.13	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.