IslandPath Analysis: Azoarcus sp. BH72



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 67.83   STD DEV: 4.13
Azoarcus sp. BH72, complete genome - 1..4376040
3989 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
767	 70.68	0	820018..820914	+	298	119897059	FtsX	azo0768	-	putative cell division protein FtsX
768	 60.11	-1	821109..821672	+	187	119897060	ahpC	azo0769	-	alkyl hydroperoxide reductase subunit C
769	 64.61	0	821802..823355	+	517	119897061	ahpF	azo0770	-	alkyl hydroperoxide reductase subunit F
770	 52.57	-2	824754..826058	-	434	119897062	-	azo0771	-	C-5 cytosine-specific DNA methylase
771	 59.78	-1	826594..827043	-	149	119897063	rnhA1	azo0772	-	RnhA1 protein
772	 58.59	-2	827040..827819	-	259	119897064	-	azo0773	-	hypothetical protein
773	 53.02	-2	828127..828822	-	231	119897065	-	azo0774	-	hypothetical protein
774	 63.16	-1	829733..830302	-	189	119897066	-	azo0775	-	putative resolvase
775	 60.14	-1	830685..832355	-	556	119897067	-	azo0776	-	putative integrase
776	 65.80	0	832729..833076	+	115	119897068	-	azo0777	-	hypothetical protein
777	 65.26	0	833091..834440	+	449	119897069	-	azo0778	-	hypothetical protein
778	 66.26	0	834440..835423	+	327	119897070	ybeZ	azo0779	-	PhoH-like protein
779	 69.43	0	835416..836174	+	252	119897071	-	azo0780	-	putative metalloprotease
780	 65.13	0	836270..837115	+	281	119897072	corC	azo0781	-	putative magnesium and cobalt efflux protein
781	 71.29	0	837115..838629	+	504	119897073	lnt	azo0782	-	putative apolipoprotein N-acyltransferase
782	 73.86	+1	838754..839893	+	379	119897074	-	azo0783	-	membrane fusion protein
783	 69.22	0	839904..842957	+	1017	119897075	-	azo0784	-	RND efflux transporter, permease protein
784	 64.40	0	843084..844010	+	308	119897076	glyQ	azo0785	-	glycyl-tRNA synthetase subunit alpha
785	 69.83	0	844007..846094	+	695	119897077	glyS	azo0786	-	glycyl-tRNA synthetase, beta chain
786	 66.10	0	846144..846677	+	177	119897078	-	azo0787	-	D,D-heptose 1,7-bisphosphate phosphatase
787	 68.51	0	846695..847453	+	252	119897079	-	azo0788	-	acyltransferase
788	 65.42	0	847542..848102	-	186	119897080	-	azo0789	-	phasin
789	 65.77	0	848399..849175	-	258	119897081	paaF1	azo0790	-	enoyl-CoA hydratase
790	 67.36	0	849202..849774	-	190	119897082	-	azo0791	-	hypothetical protein
791	 67.88	0	849771..850349	-	192	119897083	-	azo0792	-	hypothetical protein
792	 67.43	0	850359..850880	-	173	119897084	-	azo0793	-	phosphatase
793	 71.49	0	850880..851875	-	331	119897085	-	azo0794	-	sugar-phosphate isomerase
794	 68.85	0	852075..854042	+	655	119897086	-	azo0795	-	putative glutathione-regulated potassium-efflux system protein
795	 67.90	0	854050..854697	-	215	119897087	-	azo0796	-	hypothetical protein
796	 70.82	0	854732..855430	-	232	119897088	-	azo0797	-	hypothetical protein
797	 71.75	0	855418..856656	-	412	119897089	-	azo0798	-	hypothetical protein
798	 76.74	+2	856671..857057	-	128	119897090	-	azo0799	-	hypothetical protein
799	 70.73	0	857054..857644	-	196	119897091	-	azo0800	-	hypothetical protein
800	 74.39	+1	857641..859065	-	474	119897092	-	azo0801	-	hypothetical protein
801	 72.31	+1	859072..860277	-	401	119897093	gspF1	azo0802	-	general secretion pathway protein F
802	 70.61	0	860274..861974	-	566	119897094	gspE1	azo0803	-	general secretion pathway protein E
803	 71.54	0	861980..862615	-	211	119897095	-	azo0804	-	hypothetical protein
804	 67.58	0	862681..864423	-	580	119897096	gspD1	azo0805	-	general secretion pathway protein D
805	 68.23	0	864497..865330	+	277	119897097	-	azo0806	-	ABC transporter ATP-binding protein
806	 67.30	0	865327..866118	+	263	119897098	-	azo0807	-	hypothetical protein
807	 64.77	0	866118..866591	+	157	119897099	-	azo0808	-	hypothetical protein
808	 67.02	0	866632..867492	+	286	119897100	vacJ	azo0809	-	putative surface lipoprotein
809	 68.06	0	867498..868145	+	215	119897101	-	azo0810	-	hypothetical protein
810	 72.70	+1	868216..868497	+	93	119897102	-	azo0811	-	hypothetical protein
811	 67.34	0	868505..869401	+	298	119897103	-	azo0812	-	ABC transporter ATP-binding protein
812	 62.92	-1	869394..870194	+	266	119897104	-	azo0813	-	ABC-2 type transporter permease protein
813	 64.34	0	870223..870480	+	85	119897105	-	azo0814	-	BolA-like protein
814	 68.27	0	870517..871767	+	416	119897106	murA	azo0815	-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase
815	 68.87	0	871799..872206	-	135	119897107	rnk	azo0816	-	putative regulator of nucleoside diphosphate kinase
816	 66.07	0	872316..872990	+	224	119897108	hisG	azo0817	-	ATP phosphoribosyltransferase catalytic subunit
817	 68.65	0	872987..874297	+	436	119897109	hisD	azo0818	-	histidinol dehydrogenase
818	 70.53	0	874352..875542	-	396	119897110	aspC	azo0819	-	hypothetical protein
819	 64.72	0	875655..877499	-	614	119897111	pckG	azo0820	-	phosphoenolpyruvate carboxykinase
820	 66.80	0	877831..880107	+	758	119897112	maeB1	azo0821	-	malic enzyme
821	 69.39	0	880162..881298	+	378	119897113	-	azo0822	-	hypothetical protein
822	 66.31	0	881699..882541	+	280	119897114	pbpG	azo0823	-	D-alanyl-D-alanine carboxypeptidase
823	 67.66	0	882604..883407	-	267	119897115	allR	azo0824	-	negative regulator of allantoin and glyoxylate utilization operons
824	 73.87	+1	883506..883727	+	73	119897116	-	azo0825	-	hypothetical protein
825	 70.98	0	883724..884674	+	316	119897117	-	azo0826	-	glycerate dehydrogenase
826	 65.87	0	884876..886135	+	419	119897118	-	azo0827	-	hypothetical protein
827	 75.78	+1	886288..887790	+	500	119897119	-	azo0828	-	pseudouridylate synthase
828	 66.67	0	887858..888337	-	159	119897120	nuoB1	azo0829	-	NADH-quinone oxidoreductase chain B
829	 71.41	0	888370..889254	-	294	119897121	-	azo0830	-	AraC family transcriptional regulator
830	 69.26	0	889332..889562	-	76	119897122	-	azo0831	-	hypothetical protein
831	 71.67	0	890060..891259	-	399	119897123	-	azo0832	-	ABC transporter permease protein
832	 72.29	+1	891269..892477	-	402	119897124	-	azo0833	-	ABC transporter permease protein
833	 71.19	0	892474..893181	-	235	119897125	-	azo0834	-	ABC transporter ATP-binding protein
834	 72.15	+1	893195..894343	-	382	119897126	-	azo0835	-	membrane fusion protein
835	 66.49	0	894555..896288	-	577	119897127	glnS	azo0836	-	glutaminyl-tRNA synthetase
836	 69.01	0	896453..896836	+	127	119897128	-	azo0837	-	CrcB family protein
837	 72.15	+1	896956..897630	+	224	119897129	-	azo0838	-	outer membrane protein
838	 71.13	0	897685..900981	-	1098	119897130	-	azo0839	-	SWI/SNF family helicase
839	 65.36	0	901163..903079	-	638	119897131	thiC	azo0840	-	thiamine biosynthesis protein ThiC
840	 69.12	0	903169..904023	-	284	119897132	thiD1	azo0841	-	phosphomethylpyrimidine kinase
841	 72.97	+1	904277..905893	+	538	119897133	ecaA	azo0842	-	putative carbonic anhydrase precursor
842	 69.16	0	905906..907309	-	467	119897134	-	azo0843	-	putative transcriptional regulator
843	 74.56	+1	907471..907926	+	151	119897135	-	azo0844	-	hypothetical protein
844	 68.88	0	908009..908686	+	225	119897136	-	azo0845	-	putative transcriptional regulator
845	 73.19	+1	908683..909771	+	362	119897137	-	azo0846	-	membrane fusion protein
846	 67.85	0	909768..912986	+	1072	119897138	-	azo0847	-	RND efflux transporter, permease protein
847	 66.21	0	913062..913715	+	217	119897139	pcm1	azo0848	-	putative protein-L-isoaspartate O-methyltransferase
848	 66.05	0	913724..914047	+	107	119897140	-	azo0849	-	putative sulfurtransferase protein
849	 69.70	0	914066..915382	+	438	119897141	tolC	azo0850	-	putative outer membrane efflux protein
850	 73.41	+1	915379..916623	-	414	119897142	waaA	azo0851	-	3-deoxy-D-manno-octulosonic-acid transferase
851	 64.78	0	916809..917816	+	335	119897143	wbnF	azo0852	-	putative nucleotide sugar epimerase
852	 68.92	0	917838..918635	+	265	119897144	apaH	azo0853	-	diadenosine tetraphosphatase
853	 71.46	0	918645..919436	-	263	119897145	plsC	azo0854	-	putative 1-acyl-sn-glycerol-3-phosphate acyltransferase
854	 66.14	0	919508..920266	-	252	119897146	-	azo0855	-	hypothetical protein
855	 71.31	0	920383..921654	+	423	119897147	-	azo0856	-	glycosyltransferase
856	 66.45	0	921718..922653	+	311	119897148	-	azo0857	-	putative carbohydrate kinase
857	 71.94	0	922647..923120	+	157	119897149	slyB	azo0858	-	putative outer membrane protein SlyB
858	 67.94	0	923122..923514	-	130	119897150	dgkA	azo0859	-	diacylglycerol kinase
859	 70.85	0	923623..924912	-	429	119897151	-	azo0860	-	hypothetical protein
860	 69.38	0	924919..925803	-	294	119897152	prmA	azo0861	-	ribosomal protein L11 methyltransferase
861	 64.83	0	925814..927175	-	453	119897153	accC1	azo0862	-	acetyl-CoA carboxylase biotin carboxylase subunit
862	 73.64	+1	927168..927296	-	42	119897154	-	azo0863	-	hypothetical protein
863	 64.90	0	927305..927757	-	150	119897155	accB	azo0864	-	biotin carboxyl carrier protein of acetyl-CoA carboxylase
864	 66.06	0	927813..928310	-	165	119897156	aroQ	azo0865	-	3-dehydroquinate dehydratase
865	 67.23	0	928372..928908	-	178	119897157	-	azo0866	-	putative thioredoxin
866	 68.99	0	928905..929594	-	229	119897158	-	azo0867	-	hypothetical protein
67.83	MEAN

4.13	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.