IslandPath Analysis: Azoarcus sp. BH72



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 67.83   STD DEV: 4.13
Azoarcus sp. BH72, complete genome - 1..4376040
3989 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
695	 64.71	0	740204..743470	+	1088	119896987	-	azo0696	-	methylmalonyl-coa mutase protein
696	 65.96	0	743567..743848	-	93	119896988	-	azo0697	-	hypothetical protein
697	 68.99	0	743845..745224	-	459	119896989	fumC	azo0698	-	fumarate hydratase
698	 68.69	0	745304..746044	-	246	119896990	-	azo0699	-	hypothetical protein
699	 69.21	0	746188..747486	-	432	119896991	-	azo0700	-	hypothetical protein
700	 75.00	+1	747598..748953	-	451	119896992	nagZ1	azo0701	-	putative beta-hexosaminidase
701	 71.55	0	748950..750281	-	443	119896993	creD	azo0702	-	hypothetical protein
702	 73.17	+1	750394..751824	-	476	119896994	creC	azo0703	-	sensory histidine kinase CreC
703	 73.87	+1	751848..752555	-	235	119896995	creB	azo0704	-	DNA-binding response regulator CreB
704	 67.22	0	752570..754012	-	480	119896996	mgtE	azo0705	-	putative magnesium transport protein
705	 69.54	0	754167..754862	-	231	119896997	mtgA	azo0706	-	monofunctional biosynthetic peptidoglycan transglycosylase
706	 74.70	+1	754859..755704	-	281	119896998	aroE	azo0707	-	shikimate 5-dehydrogenase
707	 71.43	0	755718..756620	-	300	119896999	-	azo0708	-	hypothetical protein
708	 68.61	0	756666..758567	-	633	119897000	-	azo0709	-	putative exoribonuclease II
709	 76.00	+1	758634..759479	-	281	119897001	-	azo0710	-	putative methyltransferase
710	 68.69	0	759510..760103	-	197	119897002	-	azo0711	-	hypothetical protein
711	 63.39	-1	760137..760961	-	274	119897003	uppP	azo0712	-	undecaprenol kinase
712	 73.41	+1	761053..761304	-	83	119897004	-	azo0713	-	hypothetical protein
713	 70.79	0	761309..761842	-	177	119897005	-	azo0714	-	hypothetical protein
714	 70.07	0	761844..762548	-	234	119897006	-	azo0715	-	hypothetical protein
715	 69.16	0	762691..766773	+	1360	119897007	hrpA	azo0716	-	putative ATP-dependent helicase
716	 66.98	0	766798..767121	-	107	119897008	-	azo0717	-	hypothetical protein
717	 63.54	-1	767369..767752	+	127	119897009	rpsF	azo0718	-	30S ribosomal protein S6
718	 61.86	-1	767768..768079	+	103	119897010	priB	azo0719	-	putative primosomal replication proteinN
719	 56.52	-2	768081..768356	+	91	119897011	rpsR	azo0720	-	30S ribosomal protein S18
720	 63.38	-1	768375..768830	+	151	119897012	rplI	azo0721	-	50S ribosomal protein L9
721	 61.56	-1	768968..770377	+	469	119897013	dnaB	azo0722	-	DnaB protein
722	 62.37	-1	776049..777212	+	387	119897014	-	azo0723	-	hypothetical protein
723	 59.50	-2	777226..777951	+	241	119897015	dsbC	azo0724	-	putative protein disulfide-isomerase
724	 65.35	0	777974..779038	-	354	119897016	mltA	azo0725	-	putative membrane-bound transglycolase
725	 57.89	-2	779280..779393	+	37	119897017	-	azo0726	-	hypothetical protein
726	 64.35	0	779386..780249	+	287	119897018	-	azo0727	-	ATPase family protein
727	 70.64	0	780242..781198	+	318	119897019	-	azo0728	-	hypothetical protein
728	 68.66	0	781195..781395	-	66	119897020	-	azo0729	-	hypothetical protein
729	 62.96	-1	781398..782153	-	251	119897021	yacF	azo0730	-	hypothetical protein
730	 68.44	0	782235..782855	-	206	119897022	coaE	azo0731	-	CoaE protein
731	 68.50	0	782852..783562	-	236	119897023	-	azo0732	-	hypothetical protein
732	 70.08	0	783572..784363	-	263	119897024	baf	azo0733	-	pantothenate kinase
733	 70.64	0	784360..785088	-	242	119897025	birA	azo0734	-	biotin--[acetyl-CoA-carboxylase] ligase
734	 67.65	0	785250..786680	-	476	119897026	ntrC	azo0735	-	nitrogen regulation protein NR(I)
735	 65.36	0	786724..787797	-	357	119897027	ntrB	azo0736	-	nitrogen regulation protein NR(II)
736	 68.76	0	787859..788335	-	158	119897028	-	azo0737	-	hypothetical protein
737	 63.40	-1	788464..789873	-	469	119897029	glnA	azo0738	-	glutamine synthetase I
738	 69.88	0	790055..791269	-	404	119897030	czcD1	azo0739	-	putative cobalt-zinc-cadmium resistance protein
739	 69.54	0	791287..791739	+	150	119897031	-	azo0740	-	putative sulphurtransferase protein
740	 64.58	0	791814..792914	+	366	119897032	nadA	azo0741	-	quinolinate synthetase
741	 68.53	0	792936..793685	+	249	119897033	-	azo0742	-	hypothetical protein
742	 71.07	0	793682..794839	+	385	119897034	cls1	azo0743	-	putative cardiolipin synthetase
743	 67.25	0	794846..795355	-	169	119897035	-	azo0744	-	hypothetical protein
744	 74.65	+1	795366..796367	-	333	119897036	-	azo0745	-	glutamate-tRNA ligase
745	 68.20	0	796481..798106	+	541	119897037	-	azo0746	-	hypothetical protein
746	 70.34	0	798162..799442	+	426	119897038	-	azo0747	-	hypothetical protein
747	 72.53	+1	799936..800856	-	306	119897039	-	azo0748	-	cellobiose phosphorylase
748	 69.19	0	800954..801982	+	342	119897040	-	azo0749	-	glycosyl transferase
749	 70.36	0	802057..803655	+	532	119897041	-	azo0750	-	hypothetical protein
750	 70.15	0	803652..804053	+	133	119897042	-	azo0751	-	hypothetical protein
751	 65.57	0	804105..805196	-	363	119897043	ychF	azo0752	-	translation-associated GTPase
752	 69.41	0	805193..805849	-	218	119897044	pth	azo0753	-	peptidyl-tRNA hydrolase
753	 65.67	0	805889..806491	-	200	119897045	rplY	azo0754	-	50S ribosomal protein L25/general stress protein Ctc
754	 66.56	0	806573..807523	-	316	119897046	prsA	azo0755	-	ribose-phosphate diphosphokinase
755	 65.37	0	807698..808546	-	282	119897047	ispE	azo0756	-	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
756	 70.96	0	808543..809124	-	193	119897048	lolB	azo0757	-	outer membrane lipoprotein
757	 70.80	0	809121..810836	-	571	119897049	-	azo0758	-	hypothetical protein
758	 71.31	0	810989..811807	+	272	119897050	mutM	azo0759	-	MutM protein
759	 66.77	0	811931..813898	+	655	119897051	-	azo0760	-	hypothetical protein
760	 60.08	-1	813966..814223	-	85	119897052	fdx1	azo0761	-	ferredoxin
761	 61.99	-1	814240..814731	-	163	119897053	coaD	azo0762	-	pantetheine-phosphate adenylyltransferase
762	 67.05	0	814728..815249	-	173	119897054	-	azo0763	-	putative methylase
763	 71.40	0	815264..816616	-	450	119897055	-	azo0764	-	Zn dependent peptidase
764	 69.05	0	816645..818111	-	488	119897056	-	azo0765	-	Zn dependent peptidase
765	 69.49	0	818232..819365	+	377	119897057	FtsY	azo0766	-	signal recognition particle-docing protein FtsY
766	 68.18	0	819362..820021	+	219	119897058	FtsE	azo0767	-	cell division ATP-binding protein FtsE
767	 70.68	0	820018..820914	+	298	119897059	FtsX	azo0768	-	putative cell division protein FtsX
768	 60.11	-1	821109..821672	+	187	119897060	ahpC	azo0769	-	alkyl hydroperoxide reductase subunit C
769	 64.61	0	821802..823355	+	517	119897061	ahpF	azo0770	-	alkyl hydroperoxide reductase subunit F
770	 52.57	-2	824754..826058	-	434	119897062	-	azo0771	-	C-5 cytosine-specific DNA methylase
771	 59.78	-1	826594..827043	-	149	119897063	rnhA1	azo0772	-	RnhA1 protein
772	 58.59	-2	827040..827819	-	259	119897064	-	azo0773	-	hypothetical protein
773	 53.02	-2	828127..828822	-	231	119897065	-	azo0774	-	hypothetical protein
774	 63.16	-1	829733..830302	-	189	119897066	-	azo0775	-	putative resolvase
775	 60.14	-1	830685..832355	-	556	119897067	-	azo0776	-	putative integrase
776	 65.80	0	832729..833076	+	115	119897068	-	azo0777	-	hypothetical protein
777	 65.26	0	833091..834440	+	449	119897069	-	azo0778	-	hypothetical protein
778	 66.26	0	834440..835423	+	327	119897070	ybeZ	azo0779	-	PhoH-like protein
779	 69.43	0	835416..836174	+	252	119897071	-	azo0780	-	putative metalloprotease
780	 65.13	0	836270..837115	+	281	119897072	corC	azo0781	-	putative magnesium and cobalt efflux protein
781	 71.29	0	837115..838629	+	504	119897073	lnt	azo0782	-	putative apolipoprotein N-acyltransferase
782	 73.86	+1	838754..839893	+	379	119897074	-	azo0783	-	membrane fusion protein
783	 69.22	0	839904..842957	+	1017	119897075	-	azo0784	-	RND efflux transporter, permease protein
784	 64.40	0	843084..844010	+	308	119897076	glyQ	azo0785	-	glycyl-tRNA synthetase subunit alpha
785	 69.83	0	844007..846094	+	695	119897077	glyS	azo0786	-	glycyl-tRNA synthetase, beta chain
786	 66.10	0	846144..846677	+	177	119897078	-	azo0787	-	D,D-heptose 1,7-bisphosphate phosphatase
787	 68.51	0	846695..847453	+	252	119897079	-	azo0788	-	acyltransferase
788	 65.42	0	847542..848102	-	186	119897080	-	azo0789	-	phasin
789	 65.77	0	848399..849175	-	258	119897081	paaF1	azo0790	-	enoyl-CoA hydratase
790	 67.36	0	849202..849774	-	190	119897082	-	azo0791	-	hypothetical protein
791	 67.88	0	849771..850349	-	192	119897083	-	azo0792	-	hypothetical protein
792	 67.43	0	850359..850880	-	173	119897084	-	azo0793	-	phosphatase
793	 71.49	0	850880..851875	-	331	119897085	-	azo0794	-	sugar-phosphate isomerase
794	 68.85	0	852075..854042	+	655	119897086	-	azo0795	-	putative glutathione-regulated potassium-efflux system protein
67.83	MEAN

4.13	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.