IslandPathversion 1.0

IslandPath Analysis: Azoarcus sp. BH72



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 67.83 STD DEV: 4.13
Azoarcus sp. BH72, complete genome - 1..4376040
3989 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2632	 72.44	+1	2913014..2913775	+	253	119898924	tam	azo2633	-	trans-aconitate 2-methyltransferase
2633	 72.19	+1	2913806..2914276	-	156	119898925	-	azo2634	-	hypothetical protein
2634	 67.78	0	2914273..2914899	-	208	119898926	-	azo2635	-	hypothetical protein
2635	 71.81	0	2915051..2915770	-	239	119898927	-	azo2636	-	putative CbbY family protein
2636	 60.89	-1	2915888..2916406	-	172	119898928	-	azo2637	-	hypothetical protein
2637	 65.28	0	2916466..2918697	-	743	119898929	-	azo2638	-	ATPase
2638	 61.32	-1	2918694..2919161	-	155	119898930	-	azo2639	-	hypothetical protein
2639	 62.46	-1	2919238..2920236	+	332	119898931	mdcH	azo2640	-	putative transcriptional factor
2640	 52.98	-2	2920329..2921015	-	228	119898932	-	azo2641	-	hypothetical protein
2641	 57.58	-2	2921150..2921314	-	54	119898933	-	azo2642	-	hypothetical protein
2642	 65.25	0	2921344..2921907	-	187	119898934	-	azo2643	-	putative dual specificity protein phosphatase
2643	 66.49	0	2922087..2923211	+	374	119898935	draG2	azo2644	-	putative ADP-ribosyl-[dinitrogen reductase] hydrolase
2644	 62.08	-1	2923248..2923661	+	137	119898936	-	azo2645	-	hypothetical protein
2645	 57.49	-2	2923798..2924244	+	148	119898937	-	azo2646	-	hypothetical protein
2646	 73.87	+1	2924331..2925149	-	272	119898938	dlhH	azo2647	-	putative carboxymethylenebutenolidase
2647	 71.79	0	2925146..2926453	-	435	119898939	-	azo2648	-	MFS permease
2648	 69.94	0	2926624..2928333	-	569	119898940	-	azo2649	-	GGDEF family protein
2649	 68.99	0	2928487..2928744	-	85	119898941	-	azo2650	-	hypothetical protein
2650	 68.51	0	2928823..2929257	-	144	119898942	-	azo2651	-	hypothetical protein
2651	 74.82	+1	2929286..2929984	+	232	119898943	-	azo2652	-	hypothetical protein
2652	 66.12	0	2930124..2931599	+	491	119898944	pitA	azo2653	-	putative phosphate transporter
2653	 69.64	0	2931633..2932103	-	156	119898945	-	azo2654	-	lactoylglutathione lyase
2654	 71.25	0	2932255..2933628	+	457	119898946	-	azo2655	-	hypothetical protein
2655	 71.17	0	2933625..2933957	+	110	119898947	-	azo2656	-	hypothetical protein
2656	 63.84	0	2934063..2934839	+	258	119898948	fpr2	azo2657	-	ferredoxin-NADP+ reductase
2657	 71.21	0	2934938..2935267	+	109	119898949	trxA2	azo2658	-	putative thioredoxin-disulfide reductase
2658	 70.28	0	2935396..2935866	+	156	119898950	-	azo2659	-	hypothetical protein
2659	 69.81	0	2935880..2936356	+	158	119898951	ybcL	azo2660	-	hypothetical protein
2660	 71.09	0	2936540..2937082	+	180	119898952	-	azo2661	-	hypothetical protein
2661	 69.99	0	2937338..2938783	+	481	119898953	-	azo2662	-	hypothetical protein
2662	 63.64	-1	2938853..2939512	-	219	119898954	-	azo2663	-	peroxiredoxin
2663	 67.82	0	2939583..2939930	+	115	119898955	-	azo2664	-	hypothetical protein
2664	 72.06	+1	2939940..2940662	-	240	119898956	-	azo2665	-	hypothetical protein
2665	 73.76	+1	2940920..2941666	-	248	119898957	-	azo2666	-	hypothetical protein
2666	 63.27	-1	2941903..2942196	+	97	119898958	nolR	azo2667	-	putative transcriptional repressor
2667	 69.63	0	2942246..2943358	+	370	119898959	nerA	azo2668	-	glycerol trinitrate reductase
2668	 67.23	0	2943448..2944503	-	351	119898960	-	azo2669	-	cytochrome c family protein
2669	 69.83	0	2944870..2945280	+	136	119898961	-	azo2670	-	hypothetical protein
2670	 69.44	0	2945296..2945943	-	215	119898962	fixJ1	azo2671	-	two-component response regulator
2671	 70.87	0	2945927..2947732	-	601	119898963	-	azo2672	-	putative sensor histidine kinase
2672	 66.25	0	2947962..2948441	+	159	119898964	-	azo2673	-	hypothetical protein
2673	 51.95	-2	2949219..2950808	-	529	119898965	-	azo2674	-	hypothetical protein
2674	 52.93	-2	2950840..2951982	-	380	119898966	-	azo2675	-	TDP-4-oxo-6-deoxy-D-glucose transaminase
2675	 54.52	-2	2952049..2952921	-	290	119898967	-	azo2676	-	putative methyltransferase
2676	 54.05	-2	2952918..2953337	-	139	119898968	-	azo2677	-	hypothetical protein
2677	 55.27	-2	2953334..2954254	-	306	119898969	-	azo2678	-	hypothetical protein
2678	 52.64	-2	2954285..2954947	-	220	119898970	-	azo2679	-	acyltransferase
2679	 53.40	-2	2954944..2955885	-	313	119898971	-	azo2680	-	glycosyltransferase
2680	 55.41	-2	2955882..2956574	-	230	119898972	-	azo2681	-	hypothetical protein
2681	 66.86	0	2957374..2957898	+	174	119898973	-	azo2682	-	hypothetical protein
2682	 64.64	0	2957907..2958251	+	114	119898974	-	azo2683	-	hypothetical protein
2683	 60.15	-1	2958597..2959409	-	270	119898975	-	azo2684	-	putative integrase
2684	 67.15	0	2960329..2962404	+	691	119898976	-	azo2685	-	GGDEF/EAL/PAS-domain-containing protein
2685	 59.48	-2	2962857..2963009	+	50	119898977	-	azo2687	-	hypothetical protein
2686	 61.88	-1	2963024..2963503	-	159	119898978	creA	azo2688	-	putative periplasmic protein [creA]
2687	 63.77	0	2963500..2963913	-	137	119898979	-	azo2689	-	hypothetical protein
2688	 68.33	0	2964056..2965018	+	320	119898980	-	azo2690	-	hypothetical protein
2689	 69.78	0	2965210..2967042	+	610	119898981	-	azo2691	-	GGDEF family protein
2690	 69.92	0	2967068..2968882	+	604	119898982	-	azo2692	-	GGDEF family protein
2691	 68.02	0	2969110..2970591	+	493	119898983	fliC2	azo2693	-	flagellin
2692	 61.27	-1	2970739..2971869	+	376	119898984	-	azo2694	-	nucleotide sugar aminotransferase
2693	 63.70	0	2971926..2973140	+	404	119898985	-	azo2695	-	hypothetical protein
2694	 60.35	-1	2973203..2974009	+	268	119898986	-	azo2696	-	hypothetical protein
2695	 60.50	-1	2974127..2975602	+	491	119898987	-	azo2697	-	hypothetical protein
2696	 61.76	-1	2975648..2976952	+	434	119898988	pepM	azo2698	-	putative phosphoenolpyruvate phosphomutase
2697	 67.38	0	2976949..2978073	+	374	119898989	-	azo2699	-	phosphonopyruvate decarboxylase, putative
2698	 69.55	0	2978078..2979187	+	369	119898990	-	azo2700	-	alcohol dehydrogenase
2699	 60.83	-1	2979203..2980453	+	416	119898991	-	azo2701	-	teichoic acid biosynthesis protein B
2700	 67.88	0	2980491..2984042	+	1183	119898992	-	azo2702	-	glycosyltransferase
2701	 70.97	0	2984043..2986367	-	774	119898993	-	azo2703	-	hypothetical protein
2702	 65.86	0	2986580..2988061	+	493	119898994	fliC3	azo2704	-	flagellin
2703	 62.72	-1	2988140..2988544	+	134	119898995	flaG	azo2705	-	flagellar protein
2704	 64.21	0	2988571..2989992	+	473	119898996	fliD	azo2706	-	flagellar hook-associated protein
2705	 65.94	0	2990004..2990414	+	136	119898997	fliS	azo2707	-	flagellar protein FliS
2706	 69.18	0	2990427..2990744	+	105	119898998	fliT	azo2708	-	flagellar-like protein FliT
2707	 72.22	+1	2990776..2991891	+	371	119898999	-	azo2709	-	hypothetical protein
2708	 69.84	0	2991881..2992258	+	125	119899000	-	azo2710	-	flagellar related protein
2709	 65.38	0	2992357..2993136	+	259	119899001	-	azo2711	-	hypothetical protein
2710	 68.63	0	2993380..2997147	+	1255	119899002	-	azo2712	-	GGDEF/PAS/PAC-domain-containing protein
2711	 61.28	-1	2997226..2997522	-	98	119899003	-	azo2713	-	flagellar hook-basal body complex protein FliE
2712	 67.88	0	2997698..2999176	-	492	119899004	fleR	azo2714	-	sigma-54 dependent response regulator
2713	 71.83	0	2999173..3000354	-	393	119899005	fleS	azo2715	-	putative sensory box sensor histidine kinase
2714	 68.27	0	3000514..3002202	+	562	119899006	fliF	azo2716	-	flagellar MS-ring protein
2715	 65.67	0	3002199..3003197	+	332	119899007	fliG	azo2717	-	flagellar motor switch protein FliG
2716	 73.36	+1	3003231..3003977	+	248	119899008	fliH	azo2718	-	flagellar assembly protein FliH
2717	 70.58	0	3003991..3005397	+	468	119899009	fliI	azo2719	-	ATP synthase
2718	 67.77	0	3005493..3005945	+	150	119899010	fliJ	azo2720	-	putative flagellar protein FliJ
2719	 73.75	+1	3006109..3007209	+	366	119899011	fliK	azo2721	-	putative flagellar hook-length control protein FliK
2720	 68.04	0	3007300..3007881	+	193	119899012	fliL	azo2722	-	putative flagellar basal body-associated protein FliL
2721	 64.69	0	3007896..3008906	+	336	119899013	fliM	azo2723	-	flagellar motor switch protein FliM
2722	 66.25	0	3008899..3009378	+	159	119899014	fliN	azo2724	-	flagellar motor switch FliN
2723	 71.30	0	3009540..3009863	+	107	119899015	fliO	azo2725	-	flagellar biosynthesis protein, FliO
2724	 65.12	0	3009853..3010629	+	258	119899016	fliP	azo2726	-	flagellar biosynthesis protein FliP
2725	 61.85	-1	3010643..3010912	+	89	119899017	fliQ	azo2727	-	flagellar biosynthesis protein FliQ
2726	 67.77	0	3010935..3011747	+	270	119899018	fliR	azo2728	-	flagellar biosynthesis protein FliR
2727	 69.96	0	3011751..3012236	-	161	119899019	-	azo2729	-	hypothetical protein
2728	 66.59	0	3012247..3013509	-	420	119899020	flgL	azo2730	-	flagellar hook-filament junction protein 3
2729	 67.52	0	3013521..3015512	-	663	119899021	flgK	azo2731	-	flagellar hook-filament junction protein 1
2730	 70.69	0	3015668..3016735	-	355	119899022	flgJ	azo2732	-	peptidoglycan hydrolase
2731	 69.45	0	3016818..3017930	-	370	119899023	flgI	azo2733	-	flagellar basal body P-ring protein
67.83	MEAN

4.13	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.