IslandPath Analysis: Azoarcus sp. BH72



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 67.83   STD DEV: 4.13
Azoarcus sp. BH72, complete genome - 1..4376040
3989 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
111	 73.15	+1	128838..129824	+	328	119896403	adhA	azo0111	-	putative alcohol dehydrogenase
112	 71.79	0	129841..130737	-	298	119896404	gstR1	azo0112	-	putative transcriptional regulator
113	 71.60	0	130842..131489	+	215	119896405	gstA	azo0113	-	glutathione transferase
114	 73.27	+1	131492..132490	+	332	119896406	-	azo0114	-	hypothetical protein
115	 67.78	0	132910..133359	-	149	119896407	-	azo0115	-	hypothetical protein
116	 69.34	0	133377..134873	-	498	119896408	amn	azo0116	-	AMP nucleosidase
117	 64.84	0	135086..135853	+	255	119896409	braF	azo0117	-	ABC transporter ATP-binding protein
118	 65.84	0	135870..136592	+	240	119896410	-	azo0118	-	ABC transporter ATP-binding protein
119	 63.87	0	136627..137841	+	404	119896411	-	azo0119	-	ABC transporter substrate-binding protein
120	 63.84	0	137898..138782	+	294	119896412	-	azo0120	-	ABC transporter permease protein
121	 66.56	0	138807..139763	+	318	119896413	livM1	azo0121	-	putative branched-chain amino acid transport permease
122	 71.01	0	139919..141091	-	390	119896414	-	azo0122	-	Fe-S cluster redox protein
123	 69.72	0	141038..141463	+	141	119896415	-	azo0123	-	putative threonine efflux protein
124	 67.14	0	141533..141742	+	69	119896416	-	azo0124	-	hypothetical protein
125	 70.72	0	141717..142061	+	114	119896417	-	azo0125	-	hypothetical protein
126	 69.26	0	142061..142369	+	102	119896418	-	azo0126	-	hypothetical protein
127	 67.19	0	142468..142659	+	63	119896419	-	azo0127	-	hypothetical protein
128	 68.11	0	142690..143106	-	138	119896420	-	azo0128	-	hypothetical protein
129	 71.07	0	143294..144907	+	537	119896421	tap	azo0129	-	putative dipeptide chemoreceptor
130	 69.27	0	145152..146765	+	537	119896422	nahY	azo0130	-	putative aromatic hydrocarbon chemotaxis transducer
131	 66.18	0	146889..147092	+	67	119896423	dmpI	azo0131	-	4-oxalocrotonate tautomerase
132	 73.81	+1	147273..148154	+	293	119896424	-	azo0132	-	LysR family transcriptional regulator
133	 70.36	0	148401..149321	+	306	119896425	ilvE1	azo0133	-	branched-chain-amino-acid transaminase
134	 68.97	0	149318..150751	-	477	119896426	ydaM	azo0134	-	putative response regulator
135	 64.43	0	150748..151149	-	133	119896427	-	azo0135	-	putative response regulator
136	 68.42	0	151184..153406	-	740	119896428	-	azo0136	-	putative hybrid sensor and regulator protein
137	 70.59	0	153403..154701	-	432	119896429	amiC1	azo0137	-	putative aliphatic amidase expression-regulating protein
138	 72.85	+1	154860..155846	+	328	119896430	-	azo0138	-	hypothetical protein
139	 73.50	+1	155860..156708	+	282	119896431	cpdA	azo0139	-	phosphodiesterase
140	 73.76	+1	156692..157861	-	389	119896432	-	azo0140	-	hypothetical protein
141	 69.61	0	158045..159949	+	634	119896433	gidA	azo0141	-	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
142	 68.70	0	159946..160584	+	212	119896434	gidB	azo0142	-	glucose-inhibited division protein B
143	 66.93	0	160716..161486	+	256	119896435	parA1	azo0143	-	ParA family protein
144	 67.01	0	161496..161789	+	97	119896436	-	azo0144	-	nucleotidyltransferase
145	 65.01	0	161786..162148	+	120	119896437	-	azo0145	-	hypothetical protein
146	 70.25	0	162150..163013	+	287	119896438	parB	azo0146	-	chromosome partitioning protein ParB
147	 73.10	+1	163114..165879	-	921	119896439	-	azo0147	-	hypothetical protein
148	 66.88	0	165901..167784	-	627	119896440	-	azo0148	-	putative acyltransferase family protein
149	 70.18	0	167781..169031	-	416	119896441	uxuA	azo0149	-	putative mannonate dehydratase
150	 67.93	0	169028..171166	-	712	119896442	aas	azo0150	-	bifunctional Aas protein
151	 60.90	-1	171247..171558	-	103	119896443	smtB	azo0151	-	putative transcriptional repressor
152	 61.25	-1	171735..172085	+	116	119896444	-	azo0152	-	hypothetical protein
153	 61.13	-1	172088..172936	+	282	119896445	atpB	azo0153	-	F0F1 ATP synthase subunit A
154	 57.72	-2	172992..173237	+	81	119896446	atpE	azo0154	-	F0F1 ATP synthase subunit C
155	 62.87	-1	173279..173752	+	157	119896447	atpF	azo0155	-	F0F1 ATP synthase subunit B
156	 64.79	0	173756..174289	+	177	119896448	atpH	azo0156	-	putative ATP synthase delta chain
157	 63.81	0	174303..175841	+	512	119896449	atpA	azo0157	-	F0F1 ATP synthase subunit alpha
158	 61.26	-1	175863..176732	+	289	119896450	atpG	azo0158	-	F0F1 ATP synthase subunit gamma
159	 63.10	-1	176757..178157	+	466	119896451	atpD	azo0159	-	F0F1 ATP synthase subunit beta
160	 63.62	-1	178210..178635	+	141	119896452	atpC	azo0160	-	F0F1 ATP synthase subunit epsilon
161	 67.36	0	178705..179283	-	192	119896453	-	azo0161	-	hypothetical protein
162	 65.18	0	179327..180064	-	245	119896454	ubiE1	azo0162	-	ubiquinone/menaquinone biosynthesis methyltransferase
163	 66.43	0	180072..180494	-	140	119896455	-	azo0163	-	hypothetical protein
164	 69.62	0	180644..181354	+	236	119896456	phoB	azo0164	-	phosphate regulon transcriptional regulatory protein
165	 67.45	0	181446..182717	+	423	119896457	phoR	azo0165	-	phosphate regulon sensor protein
166	 68.72	0	182683..184287	-	534	119896458	-	azo0166	-	hypothetical protein
167	 68.59	0	184317..184733	-	138	119896459	-	azo0167	-	hypothetical protein
168	 67.64	0	184801..185625	-	274	119896460	-	azo0168	-	glutamine amidotransferases class-II (Gn-AT),YafJ-type
169	 68.59	0	185689..186207	-	172	119896461	-	azo0169	-	hypothetical protein
170	 65.91	0	186300..187760	-	486	119896462	gatB	azo0170	-	aspartyl/glutamyl-tRNA amidotransferase subunit B
171	 71.73	0	187818..188330	-	170	119896463	-	azo0171	-	hypothetical protein
172	 70.70	0	188336..189799	-	487	119896464	gatA	azo0172	-	glutamyl-tRNA(Gln) amidotransferase subunit A
173	 66.32	0	189852..190139	-	95	119896465	gatC	azo0173	-	aspartyl/glutamyl-tRNA amidotransferase subunit C
174	 65.42	0	190256..191299	+	347	119896466	mreB	azo0174	-	rod shape-determining protein MreB
175	 69.61	0	191345..192262	+	305	119896467	mreC	azo0175	-	rod shape-determining protein
176	 67.43	0	192266..192787	+	173	119896468	mreD	azo0176	-	rod shape-determining protein
177	 68.20	0	192797..194686	+	629	119896469	pbpA	azo0177	-	penicillin-binding protein
178	 65.70	0	194683..195819	+	378	119896470	rodA	azo0178	-	rod shape-determining protein
179	 72.43	+1	195800..196840	+	346	119896471	rlpA	azo0179	-	lipoprotein
180	 65.16	0	196966..198096	+	376	119896472	dacC	azo0180	-	D-alanyl-D-alanine carboxypeptidase
181	 67.02	0	198136..198993	+	285	119896473	daaA	azo0181	-	D-alanine transaminase
182	 64.89	0	198986..199267	+	93	119896474	-	azo0182	-	hypothetical protein
183	 67.69	0	199264..199947	+	227	119896475	lipB	azo0183	-	LipB protein
184	 64.98	0	199989..200936	+	315	119896476	lipA	azo0184	-	lipoyl synthase
185	 64.90	0	201005..201682	+	225	119896477	-	azo0185	-	hypothetical protein
186	 63.51	-1	201756..203750	+	664	119896478	rep	azo0186	-	ATP-dependent DNA helicase
187	 66.88	0	203837..204298	-	153	119896479	-	azo0187	-	cytochrome c5
188	 61.71	-1	210014..210739	-	241	119896480	yueD	azo0189	-	short chain dehydrogenase
189	 62.35	-1	210838..211857	+	339	119896481	-	azo0190	-	hypothetical protein
190	 66.04	0	211933..212409	+	158	119896482	-	azo0191	-	hypothetical protein
191	 69.19	0	212402..213313	+	303	119896483	apbA1	azo0192	-	2-dehydropantoate 2-reductase
192	 69.26	0	213319..213780	-	153	119896484	trxC1	azo0193	-	protein-disulfide reductase
193	 70.93	0	213935..214333	+	132	119896485	hvrA1	azo0194	-	putative trans-acting regulatory protein HvrA
194	 66.27	0	214378..214626	+	82	119896486	-	azo0195	-	hypothetical protein
195	 70.14	0	214688..215722	-	344	119896487	-	azo0196	-	hypothetical protein
196	 71.23	0	215834..216118	+	94	119896488	-	azo0197	-	hypothetical protein
197	 73.44	+1	216106..217965	-	619	119896489	pabB	azo0198	-	para-aminobenzoate synthase component I / 4-amino-4-deoxycho
198	 72.69	+1	218051..219196	+	381	119896490	sbcD	azo0199	-	exonuclease SbcD, putative
199	 75.65	+1	219193..222264	+	1023	119896491	sbcC	azo0200	-	exonuclease SbcC, putative
200	 69.73	0	222387..223202	-	271	119896492	-	azo0201	-	aryl-ester hydrolase
201	 73.33	+1	223457..224176	+	239	119896493	-	azo0202	-	hypothetical protein
202	 71.62	0	224493..225563	+	356	119896494	-	azo0203	-	hypothetical protein
203	 68.40	0	225594..226691	-	365	119896495	bmpA	azo0204	-	lipoprotein
204	 72.69	+1	226835..228079	-	414	119896496	hipO1	azo0205	-	hippurate hydrolase
205	 69.23	0	228076..228660	-	194	119896497	-	azo0206	-	AraC family transcriptional regulator
206	 68.91	0	228700..229056	+	118	119896498	-	azo0207	-	hypothetical protein
207	 67.65	0	229064..229267	-	67	119896499	-	azo0208	-	hypothetical protein
208	 71.63	0	229633..230862	-	409	119896500	agaE	azo0209	-	sarcosine oxidase, beta subunit
209	 73.83	+1	230859..232241	-	460	119896501	ooxA	azo0210	-	putative opine oxidase subunit A
210	 76.06	+1	232223..232552	-	109	119896502	-	azo0211	-	hypothetical protein
67.83	MEAN

4.13	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.