IslandPathversion 1.0

IslandPath Analysis: Azoarcus sp. BH72



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 67.83 STD DEV: 4.13
Azoarcus sp. BH72, complete genome - 1..4376040
3989 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1240	 69.42	0	1337576..1337902	+	108	119897532	qhpC	azo1241	-	quinohemoprotein amine dehydrogenase,gamma subunit
1241	 68.24	0	1337920..1339065	+	381	119897533	qhpB	azo1242	-	quinohemoprotein amine dehydrogease,beta subunit
1242	 69.55	0	1339138..1340523	-	461	119897534	-	azo1243	-	N-acetylmuramoyl-L-alanine amidase
1243	 64.94	0	1340466..1340987	-	173	119897535	-	azo1244	-	hypothetical protein
1244	 70.92	0	1341000..1342058	+	352	119897536	-	azo1245	-	electron transport protein
1245	 66.32	0	1342145..1343311	-	388	119897537	-	azo1246	-	mandelate racemase
1246	 70.77	0	1343604..1344530	+	308	119897538	-	azo1247	-	LysR family transcriptional regulator
1247	 67.47	0	1344671..1345414	+	247	119897539	nifY2	azo1248	-	NifY protein
1248	 68.91	0	1345528..1345794	+	88	119897540	-	azo1249	-	hypothetical protein
1249	 64.76	0	1345875..1346084	+	69	119897541	-	azo1250	-	hypothetical protein
1250	 67.59	0	1346107..1348047	-	646	119897542	-	azo1251	-	peptidase
1251	 74.11	+1	1348202..1348510	-	102	119897543	-	azo1252	-	hypothetical protein
1252	 72.91	+1	1348736..1349905	+	389	119897544	-	azo1253	-	hypothetical protein
1253	 70.75	0	1349902..1351638	-	578	119897545	-	azo1254	-	putative signaling protein
1254	 68.99	0	1351635..1352795	-	386	119897546	potD	azo1255	-	extracellular solute-binding protein
1255	 67.26	0	1352950..1355322	+	790	119897547	-	azo1256	-	putative serine/threonine protein kinase
1256	 69.61	0	1355479..1356123	+	214	119897548	-	azo1257	-	hypothetical protein
1257	 73.97	+1	1356239..1358347	+	702	119897549	-	azo1258	-	hypothetical protein
1258	 73.10	+1	1358370..1359830	+	486	119897550	pepD	azo1259	-	aminoacyl-histidine dipeptidase
1259	 71.02	0	1359827..1360354	-	175	119897551	-	azo1260	-	hypothetical protein
1260	 74.81	+1	1360403..1361335	-	310	119897552	-	azo1261	-	hypothetical protein
1261	 66.19	0	1361353..1361979	-	208	119897553	lemA1	azo1262	-	LemA family protein
1262	 60.56	-1	1362162..1362374	+	70	119897554	-	azo1263	-	hypothetical protein
1263	 71.46	0	1362410..1363681	+	423	119897555	-	azo1264	-	putative transmembrane sensor protein
1264	 65.65	0	1363688..1363981	-	97	119897556	-	azo1265	-	hypothetical protein
1265	 74.46	+1	1364049..1365062	-	337	119897557	dnaJ2	azo1266	-	putative chaperone protein DnaJ
1266	 63.58	-1	1365220..1365705	+	161	119897558	-	azo1267	-	acyl-CoA thioester hydrolase
1267	 69.92	0	1365702..1365947	+	81	119897559	-	azo1268	-	hypothetical protein
1268	 69.88	0	1365959..1367140	-	393	119897560	purT	azo1269	-	phosphoribosylglycinamide formyltransferase 2
1269	 72.92	+1	1367335..1368981	+	548	119897561	-	azo1270	-	hypothetical protein
1270	 74.42	+1	1368995..1369639	-	214	119897562	-	azo1271	-	hypothetical protein
1271	 69.21	0	1369636..1370577	-	313	119897563	-	azo1272	-	hypothetical protein
1272	 71.01	0	1370579..1371361	-	260	119897564	-	azo1273	-	putative ABC transporter ATP-binding protein
1273	 69.82	0	1371358..1372500	-	380	119897565	-	azo1274	-	putative ABC transporter permease protein
1274	 64.62	0	1372520..1374184	-	554	119897566	yjjK	azo1275	-	putative ABC transporter ATP-binding protein
1275	 71.67	0	1374585..1375484	+	299	119897567	-	azo1276	-	putative O-methyltransferase
1276	 66.06	0	1375505..1375996	-	163	119897568	-	azo1277	-	glutathione peroxidase
1277	 69.16	0	1376095..1378737	-	880	119897569	-	azo1278	-	EAL/GGDEF/PAS/PAC-domain-containing signalling protein
1278	 69.88	0	1378734..1379822	-	362	119897570	-	azo1279	-	putative cytochrome C peroxidase
1279	 63.96	0	1379865..1380641	-	258	119897571	fpr1	azo1280	-	ferredoxin-NADP+ reductase
1280	 68.28	0	1380741..1381667	+	308	119897572	-	azo1281	-	LysR family transcriptional regulator
1281	 65.86	0	1381825..1384443	-	872	119897573	ndvB	azo1282	-	putative Beta-(1-3)-glucosyl transferase
1282	 69.21	0	1384729..1385121	+	130	119897574	-	azo1283	-	hypothetical protein
1283	 70.05	0	1385065..1386660	-	531	119897575	ndvC	azo1284	-	putative glucan 1,3-beta-glucosidase
1284	 67.05	0	1386740..1389619	-	959	119897576	gcvP	azo1285	-	glycine dehydrogenase
1285	 66.41	0	1389681..1390064	-	127	119897577	gcvH	azo1286	-	glycine cleavage system protein H
1286	 66.77	0	1390115..1391122	-	335	119897578	gcvT	azo1287	-	glycine cleavage system aminomethyltransferase T
1287	 60.00	-1	1397768..1398982	+	404	119897579	narK	azo1288	-	putative nitrate transporter
1288	 65.54	0	1399088..1400770	+	560	119897580	-	azo1289	-	putative serine/threonine protein kinase
1289	 63.77	0	1400786..1401718	-	310	119897581	-	azo1290	-	hypothetical protein
1290	 71.30	0	1401860..1402312	-	150	119897582	sixA	azo1291	-	putative phosphohistidine phosphatase
1291	 69.28	0	1402375..1403868	-	497	119897583	-	azo1292	-	adenylate cyclase
1292	 68.34	0	1403946..1406627	-	893	119897584	glnE	azo1293	-	[glutamate-ammonia-ligase] adenylyltransferase
1293	 70.54	0	1406776..1410699	+	1307	119897585	-	azo1294	-	hypothetical protein
1294	 69.11	0	1410696..1411553	+	285	119897586	-	azo1295	-	carbon-nitrogen hydrolase
1295	 66.53	0	1411624..1413069	+	481	119897587	tldD	azo1296	-	TldD protein
1296	 69.82	0	1413077..1413520	-	147	119897588	-	azo1297	-	hypothetical protein
1297	 66.09	0	1413533..1414231	-	232	119897589	-	azo1298	-	hypothetical protein
1298	 64.44	0	1414245..1415591	-	448	119897590	-	azo1299	-	hypothetical protein
1299	 64.55	0	1415603..1416217	-	204	119897591	-	azo1300	-	hypothetical protein
1300	 68.90	0	1416388..1417059	+	223	119897592	-	azo1301	-	hypothetical protein
1301	 68.78	0	1417056..1420748	+	1230	119897593	-	azo1302	-	hypothetical protein
1302	 65.71	0	1420836..1421360	+	174	119897594	-	azo1303	-	hypothetical protein
1303	 64.79	0	1421344..1422837	+	497	119897595	-	azo1304	-	hypothetical protein
1304	 63.45	-1	1422881..1423378	+	165	119897596	-	azo1305	-	hypothetical protein
1305	 71.91	0	1423378..1423854	+	158	119897597	-	azo1306	-	hypothetical protein
1306	 69.57	0	1423911..1426628	+	905	119897598	-	azo1307	-	Vgr related protein
1307	 66.61	0	1426635..1428473	+	612	119897599	-	azo1308	-	hypothetical protein
1308	 69.62	0	1428437..1429453	+	338	119897600	-	azo1309	-	hypothetical protein
1309	 70.52	0	1429450..1430565	-	371	119897601	-	azo1310	-	hypothetical protein
1310	 68.94	0	1430572..1430835	-	87	119897602	-	azo1311	-	hypothetical protein
1311	 66.58	0	1431039..1432133	+	364	119897603	-	azo1312	-	tRNA (uracil-5-)-methyltransferase
1312	 61.95	-1	1432168..1432506	+	112	119897604	phnA	azo1313	-	putative phosphonoacetate hydrolase protein
1313	 67.20	0	1432522..1432893	-	123	119897605	-	azo1314	-	hypothetical protein
1314	 67.54	0	1432952..1433749	-	265	119897606	-	azo1315	-	hypothetical protein
1315	 70.63	0	1433746..1434351	-	201	119897607	-	azo1316	-	putative ATP binding protein
1316	 65.21	0	1434635..1435387	+	250	119897608	-	azo1317	-	hypothetical protein
1317	 69.07	0	1435529..1436443	-	304	119897609	-	azo1318	-	hypothetical protein
1318	 69.82	0	1436614..1437468	-	284	119897610	-	azo1319	-	putative methyltransferase
1319	 71.54	0	1437635..1438639	+	334	119897611	-	azo1320	-	AraC family transcriptional regulator
1320	 56.08	-2	1438850..1439548	+	232	119897612	-	azo1321	-	hypothetical protein
1321	 55.56	-2	1439761..1440165	+	134	119897613	-	azo1322	-	hypothetical protein
1322	 50.81	-2	1440382..1441617	+	411	119897614	-	azo1323	-	protein kinase
1323	 61.87	-1	1441791..1442165	-	124	119897615	-	azo1324	-	GTP binding protein
1324	 59.02	-2	1442281..1443378	-	365	119897616	-	azo1325	-	hypothetical protein
1325	 55.21	-2	1443478..1443669	+	63	119897617	-	azo1326	-	hypothetical protein
1326	 66.81	0	1443843..1445237	-	464	119897618	hflX2	azo1327	-	GTP-binding protein HflX
1327	 69.83	0	1445591..1446979	+	462	119897619	-	azo1328	-	hypothetical protein
1328	 71.81	0	1446976..1448064	-	362	119897620	aapM	azo1329	-	putative amino acid permease
1329	 71.37	0	1448061..1449080	-	339	119897621	aapQ	azo1330	-	putative amino acid permease
1330	 69.37	0	1449038..1450072	-	344	119897622	aapJ	azo1331	-	putative amino acid-binding protein
1331	 66.03	0	1450197..1451132	-	311	119897623	cbl	azo1332	-	transcriptional regulator CysB-like protein
1332	 69.15	0	1451135..1452220	-	361	119897624	cysA	azo1333	-	putative sulfate transport ATP-binding protein
1333	 65.54	0	1452232..1453119	-	295	119897625	cysW	azo1334	-	putative sulfate transport system permease protein
1334	 66.32	0	1453119..1453973	-	284	119897626	cysT	azo1335	-	sulfate transporter permease
1335	 65.68	0	1453973..1454983	-	336	119897627	cysP	azo1336	-	putative sulfate transport system substrate-binding protein
1336	 71.28	0	1455298..1456512	+	404	119897628	-	azo1337	-	peptidoglycan-binding protein
1337	 67.71	0	1456606..1457373	+	255	119897629	-	azo1338	-	Short-chain dehydrogenase family protein
1338	 67.11	0	1457532..1460015	+	827	119897630	ccoI	azo1339	-	putative cation-transporting ATPase
1339	 63.33	-1	1460020..1460229	+	69	119897631	ccoS	azo1340	-	cytochrome oxidase maturation protein
67.83	MEAN

4.13	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.