version 1.0
Arcobacter butzleri RM4018, complete genome - 1..2341251 2259 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 28 27.70 0 34511..34918 + 135 157736299 - Abu_0028 - hypothetical protein 29 30.43 0 34920..35816 - 298 157736300 gpsA Abu_0029 - NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 30 30.75 +1 35818..37251 - 477 157736301 gatB Abu_0030 - aspartyl/glutamyl-tRNA amidotransferase subunit B 31 26.06 0 37261..38085 - 274 157736302 - Abu_0031 - hypothetical protein 32 29.35 0 38162..40999 - 945 157736303 - Abu_0032 - oxidoreductase, FAD-binding/iron-sulfur cluster-binding protein 33 33.27 +1 41118..42758 - 546 157736304 lctP Abu_0033 - L-lactate permease 34 24.34 0 42849..43493 - 214 157736305 - Abu_0034 - two-component response regulator 35 24.44 0 43495..45687 - 730 157736306 - Abu_0035 - two-component sensor histidine kinase 36 26.36 0 45712..46299 - 195 157736307 - Abu_0036 - hypothetical protein 37 32.68 +1 46292..47671 - 459 157736308 - Abu_0037 - iron-sulfur cluster binding protein, putative 38 28.13 0 47668..48417 - 249 157736309 - Abu_0038 - Fe-S oxidoreductase 39 29.05 0 48510..48953 - 147 157736310 - Abu_0039 - dCMP deaminase, putative 40 33.76 +1 49110..49583 + 157 157736311 accB Abu_0040 - acetyl-CoA carboxylase, biotin carboxyl carrier protein 41 31.86 +1 49593..50945 + 450 157736312 accC1 Abu_0041 - biotin carboxylase 42 30.24 0 51167..52717 + 516 157736313 - Abu_0042 - DEAD-box ATP dependent DNA helicase 43 32.58 +1 52925..54520 + 531 157736314 - Abu_0043 - phosphate permease, putative 44 24.35 0 54761..55495 + 244 157736315 - Abu_0044 - putative permease 45 24.83 0 55500..57287 + 595 157736316 asnB1 Abu_0045 - asparagine synthetase (glutamine-hydrolyzing) 46 24.43 0 57411..57848 - 145 157736317 - Abu_0046 - hypothetical protein 47 24.91 0 58145..59545 - 466 157736318 - Abu_0047 - PhoH family protein 48 24.82 0 59538..60089 - 183 157736319 - Abu_0048 - hypothetical protein 49 27.00 0 60059..61243 - 394 157736320 - Abu_0049 - recombination factor protein RarA 50 27.42 0 61227..62054 - 275 157736321 rluB Abu_0050 - ribosomal large subunit pseudouridine synthase B 51 30.53 +1 62051..63013 - 320 157736322 - Abu_0051 - carbohydrate isomerase KpsF/GutQ family protein 52 28.45 0 63026..64948 - 640 157736323 - Abu_0052 - hypothetical protein 53 27.19 0 64932..65729 - 265 157736324 ksgA Abu_0053 - dimethyladenosine transferase 54 33.07 +1 65806..66567 + 253 157736325 hisF1 Abu_0054 - imidazoleglycerol phosphate synthase, cyclase subunit 55 22.08 -1 66569..67252 + 227 157736326 - Abu_0055 - hypothetical protein 56 26.82 0 67249..67785 + 178 157736327 - Abu_0056 - purine nucleoside phosphorylase 57 28.16 0 67796..68878 + 360 157736328 - Abu_0057 - hypothetical protein 58 28.65 0 68967..70376 + 469 157736329 gltX1 Abu_0058 - glutamyl-tRNA synthetase 59 32.32 +1 70400..70696 + 98 157736330 rbpA Abu_0059 - RNA recognition motif-containing protein 60 25.00 0 70806..71465 + 219 157736331 - Abu_0060 - two-component response regulator 61 21.79 -1 71440..72591 + 383 157736332 - Abu_0061 - two-component sensor histidine kinase 62 29.43 0 72655..73038 + 127 157736333 - Abu_0062 - hypothetical protein 63 23.32 -1 73038..74225 + 395 157736334 - Abu_0063 - hypothetical protein 64 23.18 -1 74222..75226 + 334 157736335 czcB Abu_0064 - cation efflux system, membrane fusion protein 65 27.35 0 75233..78340 + 1035 157736336 czcA Abu_0065 - heavy metal efflux pump 66 29.08 0 78389..78952 + 187 157736337 - Abu_0066 - periplasmic protein 67 23.93 0 78983..80311 - 442 157736338 - Abu_0067 - fibronectin/fibrinogen-binding protein, putative 68 31.45 +1 80405..80722 + 105 157736339 - Abu_0068 - hypothetical protein 69 31.71 +1 80789..82393 + 534 157736340 - Abu_0069 - hypothetical protein 70 19.38 -2 82420..82935 - 171 157736341 - Abu_0070 - hypothetical protein 71 29.68 0 83047..84855 + 602 157736342 thrS Abu_0071 - threonyl-tRNA synthetase 72 30.30 0 84852..85379 + 175 157736343 infC Abu_0072 - translation initiation factor IF-3 73 30.81 +1 85518..85715 + 65 157736344 rpmI Abu_0073 - 50S ribosomal protein L35 74 30.25 0 85814..86170 + 118 157736345 rplT Abu_0074 - 50S ribosomal protein L20 75 28.15 0 86243..87439 - 398 157736346 - Abu_0075 - rhodanese-like sulfur transferase 76 23.63 0 87423..87659 - 78 157736347 - Abu_0076 - hypothetical protein 77 31.56 +1 87669..89138 - 489 157736348 - Abu_0077 - putative sulfide:quinone reductase 78 22.55 -1 89219..89821 - 200 157736349 mobA Abu_0078 - molybdopterin-guanine dinucleotide biosynthesis protein 79 32.40 +1 89821..91101 - 426 157736350 leuC Abu_0079 - 3-isopropylmalate dehydratase large subunit 80 28.17 0 91170..91634 - 154 157736351 lspA Abu_0080 - lipoprotein signal peptidase 81 30.64 +1 91631..92965 - 444 157736352 glmM Abu_0081 - phosphoglucosamine mutase 82 30.65 +1 93049..93309 + 86 157736353 rpsT Abu_0082 - 30S ribosomal protein S20 83 31.09 +1 93313..94380 + 355 157736354 prfA Abu_0083 - peptide chain release factor 1 84 23.28 -1 94401..94589 + 62 157736355 - Abu_0084 - hypothetical protein 85 28.69 0 94665..95720 + 351 157736356 pstS Abu_0085 - phosphate ABC transporter, periplasmic phosphate-binding protein 86 23.40 -1 95790..97520 + 576 157736357 - Abu_0086 - EAL/GGDEF domain-containing protein 87 31.35 +1 97552..98508 + 318 157736358 pstC Abu_0087 - phosphate ABC transporter, permease protein 88 29.54 0 98505..99689 + 394 157736359 pstA Abu_0088 - phosphate ABC transporter, permease protein 89 29.18 0 99705..100475 + 256 157736360 pstB Abu_0089 - phosphate transporter, ATP-binding protein 90 24.81 0 100475..101143 + 222 157736361 - Abu_0090 - phosphate transport system regulatory protein PhoU, putative 91 22.96 -1 101167..101571 + 134 157736362 - Abu_0091 - hypothetical protein 92 25.37 0 101561..102238 + 225 157736363 - Abu_0092 - two-component response regulator 93 23.74 0 102232..103617 + 461 157736364 - Abu_0093 - two-component sensor histidine kinase 94 29.29 0 103693..104112 + 139 157736365 rplM Abu_0094 - 50S ribosomal protein L13 95 32.31 +1 104118..104507 + 129 157736366 rpsI Abu_0095 - 30S ribosomal protein S9 96 26.11 0 104560..106110 + 516 157736367 appA Abu_0096 - oligopeptide ABC transporter, periplasmic substrate-binding protein 97 26.39 0 106120..106767 + 215 157736368 - Abu_0097 - hypothetical protein 98 32.82 +1 107081..108052 + 323 157736369 - Abu_0098 - putative tricarboxylic transport protein TctC 99 24.07 0 108089..108574 + 161 157736370 - Abu_0099 - putative tricarboxylic transport protein TctB 100 32.67 +1 108571..110088 + 505 157736371 - Abu_0100 - putative tricarboxylic transport protein TctA 101 24.08 0 110116..110796 + 226 157736372 - Abu_0101 - two-component response regulator 102 22.05 -1 110786..112966 + 726 157736373 - Abu_0102 - two-component sensor histidine kinase 103 26.76 0 113010..113663 + 217 157736374 cynT1 Abu_0103 - carbonic anhydrase 104 25.32 0 113656..114741 + 361 157736375 - Abu_0104 - putative ammonia monooxygenase 105 20.38 -1 114718..115296 - 192 157736376 - Abu_0105 - hypothetical protein 106 25.30 0 115293..116201 - 302 157736377 - Abu_0106 - ABC transporter, periplasmic substrate-binding protein, putative 107 26.69 0 116201..116938 - 245 157736378 iamA Abu_0107 - ABC transporter, ATP-binding protein 108 26.33 0 116939..118051 - 370 157736379 iamB Abu_0108 - ABC transporter, permease protein 109 21.49 -1 118130..119041 - 303 157736380 - Abu_0109 - hypothetical protein 110 22.29 -1 119034..120617 - 527 157736381 - Abu_0110 - hypothetical protein 111 32.56 +1 120758..121273 + 171 157736382 luxS Abu_0111 - S-ribosylhomocysteinase 112 26.98 0 121275..121715 + 146 157736383 - Abu_0112 - hypothetical protein 113 23.87 0 121697..122467 + 256 157736384 - Abu_0113 - hypothetical protein 114 26.76 0 122506..123327 + 273 157736385 dacA Abu_0114 - serine-type D-Ala-D-Ala carboxypeptidase 115 25.95 0 123339..123839 - 166 157736386 - Abu_0115 - hypothetical protein 116 27.66 0 123957..124397 + 146 157736387 - Abu_0116 - DoxX family protein 117 31.52 +1 124421..127900 - 1159 157736388 metH Abu_0117 - 5-methyltetrahydrofolate--homocysteine methyltransferase 118 31.05 +1 128095..129015 + 306 157736389 ilvE Abu_0118 - branched-chain amino acid aminotransferase 119 31.19 +1 129060..130133 + 357 157736390 - Abu_0119 - Band 7 family protein 120 20.14 -1 130174..130461 + 95 157736391 - Abu_0120 - hypothetical protein 121 28.49 0 130461..131141 + 226 157736392 hisI Abu_0121 - bifunctional phosphoribosyl-AMP cyclohydrolase/ phosphoribosyl-ATP pyrophosphohydrolase 122 27.91 0 131234..131491 + 85 157736393 - Abu_0122 - hypothetical protein 123 32.15 +1 131527..132708 - 393 157736394 mrp Abu_0123 - ATP/GTP-binding protein 124 33.26 +1 132775..134127 - 450 157736395 thiC Abu_0124 - thiamine biosynthesis protein ThiC 125 22.30 -1 134273..135115 + 280 157736396 - Abu_0125 - hypothetical protein 126 27.91 0 135154..136278 + 374 157736397 ispDF Abu_0126 - bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein 127 23.59 0 136263..137165 + 300 157736398 - Abu_0127 - two-component response regulator 26.98 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.