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Arcobacter butzleri RM4018, complete genome - 1..2341251 2259 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 586 29.94 0 606769..607122 - 117 157736857 - Abu_0606 - hypothetical protein 587 25.55 0 607132..607542 - 136 157736858 sufE Abu_0607 - putative SUF regulatory protein 588 28.61 0 607544..608728 - 394 157736859 sufS Abu_0608 - selenocysteine lyase/cysteine desulfurase 589 22.58 -1 608721..609752 - 343 157736860 sufD Abu_0609 - Fe-S assembly protein 590 26.85 0 609739..610509 - 256 157736861 sufC Abu_0610 - Fe-S assembly ABC transporter, ATP-binding protein 591 30.34 0 610513..611982 - 489 157736862 sufB Abu_0611 - Fe-S assembly ABC transporter, permease protein 592 31.91 +1 612179..613375 + 398 157736863 iscS Abu_0612 - cysteine desulfurase/aminotransferase (IscS/NifS) 593 30.68 +1 613406..614386 + 326 157736864 iscU Abu_0613 - NifU-like protein 594 26.44 0 614517..615140 + 207 157736865 - Abu_0614 - hypothetical protein 595 23.00 -1 615142..616389 - 415 157736866 - Abu_0615 - GGDEF domain-containing protein 596 27.91 0 616464..617864 + 466 157736867 argH Abu_0616 - argininosuccinate lyase 597 30.69 +1 617884..618792 - 302 157736868 cheV Abu_0617 - chemotaxis signal transduction protein CheV 598 27.27 0 618843..619502 - 219 157736869 - Abu_0618 - MoeB/ThiF family protein 599 32.10 +1 619565..620050 + 161 157736870 greA Abu_0619 - transcription elongation factor GreA 600 19.46 -2 620063..620761 + 232 157736871 - Abu_0620 - hypothetical protein 601 29.69 0 620773..622746 + 657 157736872 uvrB Abu_0621 - excinuclease ABC subunit B 602 25.96 0 622837..624720 + 627 157736873 - Abu_0622 - methyl-accepting chemotaxis protein 603 28.37 0 624727..625371 - 214 157736874 nth Abu_0623 - endonuclease III 604 19.71 -2 625368..625778 - 136 157736875 - Abu_0624 - hypothetical protein 605 28.39 0 625939..627921 + 660 157736876 - Abu_0625 - TonB-dependent receptor protein 606 30.00 0 628024..630180 + 718 157736877 - Abu_0626 - TonB-dependent receptor protein 607 26.01 0 630232..631623 - 463 157736878 - Abu_0627 - methyl-accepting chemotaxis protein 608 19.95 -2 631716..632813 - 365 157736879 - Abu_0628 - hypothetical protein 609 19.35 -2 633356..633541 + 61 157736880 - Abu_0629 - hypothetical protein 610 22.80 -1 633654..634346 + 230 157736881 - Abu_0630 - two-component response regulator 611 20.96 -1 634351..637332 + 993 157736882 - Abu_0631 - two-component sensor histidine kinase 612 26.87 0 637521..639824 + 767 157736883 - Abu_0632 - methyl-accepting chemotaxis protein 613 27.20 0 639938..641944 + 668 157736884 - Abu_0633 - methyl-accepting chemotaxis protein 614 25.93 0 641969..643198 - 409 157736885 - Abu_0634 - hypothetical protein 615 33.99 +2 643460..643915 - 151 157736886 rpiB Abu_0635 - ribose-5-phosphate isomerase B 616 30.78 +1 643915..644697 - 260 157736887 lepP Abu_0636 - signal peptidase I 617 30.90 +1 644691..645554 - 287 157736888 folD Abu_0637 - bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase 618 28.86 0 645702..646238 + 178 157736889 rplY Abu_0638 - 50S ribosomal protein L25/general stress protein Ctc 619 25.91 0 646247..646798 + 183 157736890 pth Abu_0639 - peptidyl-tRNA hydrolase 620 21.82 -1 646801..647868 + 355 157736891 - Abu_0640 - hypothetical protein 621 25.95 0 647882..648328 + 148 157736892 - Abu_0641 - hypothetical protein 622 27.52 0 648291..649751 - 486 157736893 amiA Abu_0642 - N-acetylmuramoyl-L-alanine amidase 623 32.36 +1 649757..650788 - 343 157736894 npd Abu_0643 - 2-nitropropane dioxygenase 624 27.46 0 650849..652057 - 402 157736895 tyrS Abu_0644 - tyrosyl-tRNA synthetase 625 26.90 0 652076..654220 - 714 157736896 spoT Abu_0645 - bifunctional ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase 626 27.85 0 654254..654472 - 72 157736897 rpoZ Abu_0646 - DNA-directed RNA polymerase, omega chain 627 33.05 +1 654495..655202 - 235 157736898 pyrH Abu_0647 - uridylate kinase 628 20.69 -1 655259..656326 - 355 157736899 - Abu_0648 - hypothetical protein 629 25.32 0 656323..657258 - 311 157736900 pdxA Abu_0649 - 4-hydroxythreonine-4-phosphate dehydrogenase 630 27.48 0 657251..658036 - 261 157736901 pdxJ Abu_0650 - pyridoxal phosphate biosynthetic protein PdxJ 631 27.26 0 658046..659461 - 471 157736902 trpE Abu_0651 - anthranilate synthase, component I 632 27.11 0 659472..660500 - 342 157736903 - Abu_0652 - hypothetical protein 633 33.10 +1 660526..661788 - 420 157736904 glyA1 Abu_0653 - serine hydroxymethyltransferase 634 28.05 0 661802..663316 - 504 157736905 lysS Abu_0654 - lysyl-tRNA synthetase 635 26.95 0 663329..664033 - 234 157736906 - Abu_0655 - colicin V production protein 636 33.33 +1 664132..665193 + 353 157736907 ispG Abu_0656 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 637 22.66 -1 665193..666494 + 433 157736908 - Abu_0657 - GGDEF domain-containing protein 638 29.66 0 666557..667999 + 480 157736909 dnaB Abu_0658 - replicative DNA helicase 639 27.93 0 668065..669231 + 388 157736910 ugd Abu_0659 - UDP-glucose 6-dehydrogenase 640 28.48 0 669242..670333 + 363 157736911 - Abu_0660 - NAD-dependent epimerase/dehydratase family protein 641 29.72 0 670330..671574 + 414 157736912 - Abu_0661 - UDP-hexose dehydrogenase 642 28.38 0 671577..672545 + 322 157736913 - Abu_0662 - hypothetical protein 643 31.43 +1 672550..673128 + 192 157736914 - Abu_0663 - hypothetical protein 644 30.67 +1 673131..674219 + 362 157736915 - Abu_0664 - DegT/DnrJ/EryC1/StrS aminotransferase 645 25.78 0 674219..675397 + 392 157736916 - Abu_0665 - FAD-dependent oxidoreductase 646 30.85 +1 675363..676370 + 335 157736917 - Abu_0666 - NAD-dependent epimerase/dehydratase family protein 647 30.48 0 676375..677565 + 396 157736918 - Abu_0667 - DegT/DnrJ/EryC1/StrS aminotransferase 648 27.48 0 677567..679564 + 665 157736919 asnB2 Abu_0668 - asparagine synthetase 649 28.16 0 679515..680075 + 186 157736920 - Abu_0669 - hypothetical protein 650 28.39 0 680075..681247 + 390 157736921 wbpG1 Abu_0670 - putative LPS biosynthesis protein WbpG 651 28.16 0 681244..681861 + 205 157736922 hisH2 Abu_0671 - imidazole glycerol phosphate synthase subunit HisH 652 27.43 0 681864..682625 + 253 157736923 hisF2 Abu_0672 - imidazoleglycerol phosphate synthase, cyclase subunit 653 20.20 -1 682622..684136 + 504 157736924 - Abu_0673 - hypothetical protein 654 21.94 -1 684136..685311 + 391 157736925 - Abu_0674 - hypothetical protein 655 21.99 -1 685396..687096 + 566 157736926 - Abu_0675 - ABC transporter, ATP-binding/permease protein 656 24.31 0 687100..689106 + 668 157736927 - Abu_0676 - putative O-antigen acyltransferase 657 24.49 0 689103..690233 + 376 157736928 pglJ Abu_0677 - glycosyltransferase 658 25.33 0 690221..692119 + 632 157736929 asnB Abu_0678 - asparagine synthetase 659 23.76 0 692112..693218 + 368 157736930 - Abu_0679 - glycosyltransferase 660 23.74 0 693277..694047 + 256 157736931 - Abu_0680 - hypothetical protein 661 17.04 -2 694138..694272 + 44 157736932 - Abu_0681 - hypothetical protein 662 23.97 0 694296..695534 + 412 157736933 - Abu_0682 - O-antigen translocase 663 25.89 0 695534..696661 + 375 157736934 wbpG2 Abu_0683 - putative LPS biosynthesis protein WbpG 664 26.22 0 696658..697191 + 177 157736935 - Abu_0684 - hypothetical protein 665 21.47 -1 697188..698333 + 381 157736936 - Abu_0685 - hypothetical protein 666 21.70 -1 698326..699528 + 400 157736937 - Abu_0686 - hypothetical protein 667 23.28 -1 699534..700697 + 387 157736938 - Abu_0687 - glycosyltransferase 668 28.27 0 700687..701832 + 381 157736939 wbpG3 Abu_0688 - putative LPS biosynthesis protein WbpG 669 27.23 0 701841..702446 + 201 157736940 hisH3 Abu_0689 - imidazole glycerol phosphate synthase subunit HisH 670 27.37 0 702443..703213 + 256 157736941 hisF3 Abu_0690 - imidazoleglycerol phosphate synthase, cyclase subunit 671 29.28 0 703213..704322 + 369 157736942 - Abu_0691 - glycosyltransferase 672 28.76 0 704319..705389 + 356 157736943 - Abu_0692 - putative hexose epimerase 673 22.92 -1 705382..706380 + 332 157736944 - Abu_0693 - glycosyltransferase 674 24.92 0 706377..707339 + 320 157736945 - Abu_0694 - glycosyltransferase 675 25.83 0 707339..707911 + 190 157736946 - Abu_0695 - putative hexose epimerase 676 25.70 0 707921..709663 + 580 157736947 pglF Abu_0696 - sugar epimerase/dehydratase 677 26.32 0 709725..710123 + 132 157736948 - Abu_0697 - hypothetical protein 678 23.51 0 710127..710981 - 284 157736949 ligA Abu_0698 - DNA ligase 679 26.34 0 711046..711603 + 185 157736950 apt Abu_0699 - adenine phosphoribosyltransferase 680 31.84 +1 711620..712828 + 402 157736951 trpB1 Abu_0700 - tryptophan synthase subunit beta 681 32.19 +1 712846..713547 + 233 157736952 - Abu_0701 - hypothetical protein 682 28.31 0 713537..714949 + 470 157736953 pepA Abu_0702 - leucyl aminopeptidase 683 28.51 0 714977..715660 - 227 157736954 - Abu_0703 - TonB-dependent receptor protein 684 26.19 0 715668..716045 - 125 157736955 exbD2 Abu_0704 - biopolymer transport protein ExbD 685 26.57 0 716026..716454 - 142 157736956 exbB2 Abu_0705 - biopolymer transport protein ExbB 26.98 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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