version 1.0
Arcobacter butzleri RM4018, complete genome - 1..2341251 2259 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 539 33.15 +1 561113..561652 + 179 157736810 tpx Abu_0557 - thiol peroxidase 540 28.94 0 561764..562492 + 242 157736811 - Abu_0558 - hypothetical protein 541 25.15 0 562512..563489 - 325 157736812 - Abu_0559 - efflux protein bile acid:sodium symporter family protein 542 23.17 -1 563572..564762 + 396 157736813 - Abu_0560 - hypothetical protein 543 28.26 0 565013..565939 + 308 157736814 - Abu_0561 - putative sulfite oxidase subunit YedY 544 21.34 -1 565939..566505 + 188 157736815 - Abu_0562 - hypothetical protein 545 27.66 0 566755..568800 + 681 157736816 rep Abu_0563 - ATP-dependent DNA helicase UvrD 546 25.65 0 568847..570004 + 385 157736817 - Abu_0564 - sodium/hydrogen antiporter 547 33.48 +1 570246..571580 + 444 157736818 soxC Abu_0565 - sulfur oxidation protein SoxCD, sulfur dehydrogenase subunit 548 31.65 +1 571549..572733 + 394 157736819 soxD Abu_0566 - sulfur oxidation protein SoxCD, diheme cytochrome c subunit 549 32.20 +1 572748..573101 + 117 157736820 soxX Abu_0567 - sulfur oxidation protein SoxXA, monoheme cytochrome c subunit 550 33.55 +1 573117..573569 + 150 157736821 soxY Abu_0568 - sulfur oxidation protein SoxYZ, sulfur covalently binding protein 551 30.39 0 573627..573932 + 101 157736822 soxZ Abu_0569 - sulfur oxidation protein SoxYZ, sulfur compound chelating protein 552 29.95 0 573970..574884 + 304 157736823 soxA Abu_0570 - sulfur oxidation protein SoxXA, diheme cytochrome c subunit 553 31.90 +1 574898..575317 + 139 157736824 - Abu_0571 - hypothetical protein 554 30.84 +1 575449..577215 + 588 157736825 soxB Abu_0572 - sulfur oxidation protein, sulfate thiol esterase 555 21.38 -1 577302..578096 + 264 157736826 - Abu_0573 - hypothetical protein 556 26.44 0 578093..578527 + 144 157736827 - Abu_0574 - hypothetical protein 557 27.66 0 578531..578971 + 146 157736828 - Abu_0575 - hypothetical protein 558 28.66 0 578989..579780 + 263 157736829 - Abu_0576 - hypothetical protein 559 31.39 +1 579811..580377 - 188 157736830 pfpI Abu_0577 - peptidase, ThiJ/PfpI family protein 560 26.69 0 580452..581369 - 305 157736831 - Abu_0578 - beta-lactamase-like protein 561 21.37 -1 581459..582511 + 350 157736832 - Abu_0579 - hypothetical protein 562 30.67 +1 582535..583209 - 224 157736833 - Abu_0580 - rhodanese-like protein 563 32.11 +1 583395..586010 + 871 157736834 valS Abu_0581 - valyl-tRNA synthetase 564 22.47 -1 586038..586856 + 272 157736835 - Abu_0582 - hypothetical protein 565 30.26 0 587017..587211 + 64 157736836 - Abu_0583 - hypothetical protein 566 23.27 -1 587249..588103 - 284 157736837 - Abu_0584 - hypothetical protein 567 29.22 0 588110..589423 - 437 157736838 - Abu_0585 - major facilitator superfamily transporter 568 28.33 0 589501..590100 + 199 157736839 - Abu_0586 - HAM1-like protein 569 20.87 -1 590090..590410 - 106 157736840 - Abu_0587 - hypothetical protein 570 18.42 -2 590407..590748 - 113 157736841 - Abu_0588 - hypothetical protein 571 19.79 -2 590738..591025 - 95 157736842 - Abu_0589 - hypothetical protein 572 33.07 +1 591012..591776 - 254 157736843 proC Abu_0590 - pyrroline-5-carboxylate reductase 573 28.49 0 591846..592526 + 226 157736844 - Abu_0591 - hypothetical protein 574 27.71 0 592569..594986 + 805 157736845 lon Abu_0592 - ATP-dependent protease La 575 26.24 0 594990..595553 + 187 157736846 - Abu_0593 - rhomboid-like protein 576 29.19 0 595550..596008 + 152 157736847 - Abu_0594 - protein tyrosine phosphatase 577 23.41 -1 596048..597337 + 429 157736848 - Abu_0595 - hypothetical protein 578 23.41 -1 597340..599022 + 560 157736849 - Abu_0596 - TPR repeat-containing protein 579 26.62 0 599075..599506 - 143 157736850 - Abu_0597 - MarR family transcriptional regulator 580 26.23 0 599645..599968 + 107 157736851 - Abu_0598 - hypothetical protein 581 22.49 -1 600032..600280 - 82 157736852 - Abu_0599 - hypothetical protein 582 27.16 0 602083..603621 - 512 157736853 - Abu_0602 - methyl-accepting chemotaxis protein 583 25.33 0 603754..603978 + 74 157736854 - Abu_0603 - hypothetical protein 584 22.91 -1 604006..604878 + 290 157736855 - Abu_0604 - hypothetical protein 585 31.96 +1 605069..606520 - 483 157736856 accC2 Abu_0605 - acetyl CoA carboxylase, biotin carboxylase subunit 586 29.94 0 606769..607122 - 117 157736857 - Abu_0606 - hypothetical protein 587 25.55 0 607132..607542 - 136 157736858 sufE Abu_0607 - putative SUF regulatory protein 588 28.61 0 607544..608728 - 394 157736859 sufS Abu_0608 - selenocysteine lyase/cysteine desulfurase 589 22.58 -1 608721..609752 - 343 157736860 sufD Abu_0609 - Fe-S assembly protein 590 26.85 0 609739..610509 - 256 157736861 sufC Abu_0610 - Fe-S assembly ABC transporter, ATP-binding protein 591 30.34 0 610513..611982 - 489 157736862 sufB Abu_0611 - Fe-S assembly ABC transporter, permease protein 592 31.91 +1 612179..613375 + 398 157736863 iscS Abu_0612 - cysteine desulfurase/aminotransferase (IscS/NifS) 593 30.68 +1 613406..614386 + 326 157736864 iscU Abu_0613 - NifU-like protein 594 26.44 0 614517..615140 + 207 157736865 - Abu_0614 - hypothetical protein 595 23.00 -1 615142..616389 - 415 157736866 - Abu_0615 - GGDEF domain-containing protein 596 27.91 0 616464..617864 + 466 157736867 argH Abu_0616 - argininosuccinate lyase 597 30.69 +1 617884..618792 - 302 157736868 cheV Abu_0617 - chemotaxis signal transduction protein CheV 598 27.27 0 618843..619502 - 219 157736869 - Abu_0618 - MoeB/ThiF family protein 599 32.10 +1 619565..620050 + 161 157736870 greA Abu_0619 - transcription elongation factor GreA 600 19.46 -2 620063..620761 + 232 157736871 - Abu_0620 - hypothetical protein 601 29.69 0 620773..622746 + 657 157736872 uvrB Abu_0621 - excinuclease ABC subunit B 602 25.96 0 622837..624720 + 627 157736873 - Abu_0622 - methyl-accepting chemotaxis protein 603 28.37 0 624727..625371 - 214 157736874 nth Abu_0623 - endonuclease III 604 19.71 -2 625368..625778 - 136 157736875 - Abu_0624 - hypothetical protein 605 28.39 0 625939..627921 + 660 157736876 - Abu_0625 - TonB-dependent receptor protein 606 30.00 0 628024..630180 + 718 157736877 - Abu_0626 - TonB-dependent receptor protein 607 26.01 0 630232..631623 - 463 157736878 - Abu_0627 - methyl-accepting chemotaxis protein 608 19.95 -2 631716..632813 - 365 157736879 - Abu_0628 - hypothetical protein 609 19.35 -2 633356..633541 + 61 157736880 - Abu_0629 - hypothetical protein 610 22.80 -1 633654..634346 + 230 157736881 - Abu_0630 - two-component response regulator 611 20.96 -1 634351..637332 + 993 157736882 - Abu_0631 - two-component sensor histidine kinase 612 26.87 0 637521..639824 + 767 157736883 - Abu_0632 - methyl-accepting chemotaxis protein 613 27.20 0 639938..641944 + 668 157736884 - Abu_0633 - methyl-accepting chemotaxis protein 614 25.93 0 641969..643198 - 409 157736885 - Abu_0634 - hypothetical protein 615 33.99 +2 643460..643915 - 151 157736886 rpiB Abu_0635 - ribose-5-phosphate isomerase B 616 30.78 +1 643915..644697 - 260 157736887 lepP Abu_0636 - signal peptidase I 617 30.90 +1 644691..645554 - 287 157736888 folD Abu_0637 - bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase 618 28.86 0 645702..646238 + 178 157736889 rplY Abu_0638 - 50S ribosomal protein L25/general stress protein Ctc 619 25.91 0 646247..646798 + 183 157736890 pth Abu_0639 - peptidyl-tRNA hydrolase 620 21.82 -1 646801..647868 + 355 157736891 - Abu_0640 - hypothetical protein 621 25.95 0 647882..648328 + 148 157736892 - Abu_0641 - hypothetical protein 622 27.52 0 648291..649751 - 486 157736893 amiA Abu_0642 - N-acetylmuramoyl-L-alanine amidase 623 32.36 +1 649757..650788 - 343 157736894 npd Abu_0643 - 2-nitropropane dioxygenase 624 27.46 0 650849..652057 - 402 157736895 tyrS Abu_0644 - tyrosyl-tRNA synthetase 625 26.90 0 652076..654220 - 714 157736896 spoT Abu_0645 - bifunctional ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase 626 27.85 0 654254..654472 - 72 157736897 rpoZ Abu_0646 - DNA-directed RNA polymerase, omega chain 627 33.05 +1 654495..655202 - 235 157736898 pyrH Abu_0647 - uridylate kinase 628 20.69 -1 655259..656326 - 355 157736899 - Abu_0648 - hypothetical protein 629 25.32 0 656323..657258 - 311 157736900 pdxA Abu_0649 - 4-hydroxythreonine-4-phosphate dehydrogenase 630 27.48 0 657251..658036 - 261 157736901 pdxJ Abu_0650 - pyridoxal phosphate biosynthetic protein PdxJ 631 27.26 0 658046..659461 - 471 157736902 trpE Abu_0651 - anthranilate synthase, component I 632 27.11 0 659472..660500 - 342 157736903 - Abu_0652 - hypothetical protein 633 33.10 +1 660526..661788 - 420 157736904 glyA1 Abu_0653 - serine hydroxymethyltransferase 634 28.05 0 661802..663316 - 504 157736905 lysS Abu_0654 - lysyl-tRNA synthetase 635 26.95 0 663329..664033 - 234 157736906 - Abu_0655 - colicin V production protein 636 33.33 +1 664132..665193 + 353 157736907 ispG Abu_0656 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 637 22.66 -1 665193..666494 + 433 157736908 - Abu_0657 - GGDEF domain-containing protein 638 29.66 0 666557..667999 + 480 157736909 dnaB Abu_0658 - replicative DNA helicase 26.98 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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