version 1.0
Arcobacter butzleri RM4018, complete genome - 1..2341251 2259 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1742 31.80 +1 1786713..1787753 - 346 157738012 hemE Abu_1786 - uroporphyrinogen decarboxylase 1743 28.65 0 1787766..1788278 - 170 157738013 - Abu_1787 - putative integral membrane protein 1744 30.44 0 1788278..1789315 - 345 157738014 asd Abu_1788 - aspartate-semialdehyde dehydrogenase 1745 29.04 0 1789318..1791900 - 860 157738015 gyrA Abu_1789 - DNA gyrase subunit A 1746 24.07 0 1792039..1792254 - 71 157738016 - Abu_1790 - hypothetical protein 1747 29.27 0 1792338..1793519 - 393 157738017 argJ Abu_1791 - bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 1748 28.55 0 1793521..1794648 - 375 157738018 - Abu_1792 - potassium channel protein, putative 1749 32.80 +1 1794672..1794860 - 62 157738019 rpmB Abu_1793 - 50S ribosomal protein L28 1750 19.38 -2 1794926..1795792 - 288 157738020 - Abu_1794 - hypothetical protein 1751 24.66 0 1796039..1796407 + 122 157738021 - Abu_1795 - putative heptose phosphatase 1752 25.89 0 1796416..1797423 + 335 157738022 waaD Abu_1796 - ADP-L-glycero-D-manno-heptose-6-epimerase 1753 27.14 0 1797424..1798860 + 478 157738023 waaE Abu_1797 - ADP-heptose synthase 1754 32.28 +1 1798841..1799410 + 189 157738024 gmhA Abu_1798 - D-sedoheptulose 7-phosphate isomerase 1755 24.33 0 1799500..1801398 + 632 157738025 - Abu_1799 - putative sulfatase 1756 28.01 0 1801417..1802355 - 312 157738026 waaF Abu_1800 - lipopolysaccharide heptosyltransferase II 1757 24.29 0 1802348..1803409 - 353 157738027 - Abu_1801 - hypothetical protein 1758 25.19 0 1803402..1804322 - 306 157738028 - Abu_1802 - putative heptosyltransferase 1759 19.20 -2 1804322..1805071 - 249 157738029 - Abu_1803 - hypothetical protein 1760 24.04 0 1805206..1806852 + 548 157738030 - Abu_1804 - hypothetical protein 1761 21.51 -1 1806870..1807427 - 185 157738031 - Abu_1805 - hypothetical protein 1762 20.92 -1 1807436..1808329 - 297 157738032 - Abu_1806 - hypothetical protein 1763 26.68 0 1808338..1809795 - 485 157738033 - Abu_1807 - putative acetyltransferase 1764 22.25 -1 1809801..1810928 - 375 157738034 - Abu_1808 - putative glycosyltransferase 1765 29.33 0 1810891..1811640 - 249 157738035 - Abu_1809 - putative glycosyltransferase 1766 23.44 -1 1811720..1812790 + 356 157738036 - Abu_1810 - hypothetical protein 1767 21.60 -1 1812813..1813826 + 337 157738037 - Abu_1811 - glycosyltransferase 1768 23.69 0 1813836..1814426 - 196 157738038 - Abu_1812 - hypothetical protein 1769 23.73 0 1814423..1815547 - 374 157738039 - Abu_1813 - glycosyltransferase 1770 21.23 -1 1815544..1816881 - 445 157738040 - Abu_1814 - putative O-antigen polymerase 1771 25.14 0 1816893..1817966 - 357 157738041 - Abu_1815 - aminotransferase 1772 28.38 0 1817968..1818996 - 342 157738042 - Abu_1816 - dTDP-glucose 4,6-dehydratase 1773 29.93 0 1818986..1819867 - 293 157738043 - Abu_1817 - glucose-1-phosphate thymidylyltransferase 1774 22.50 -1 1819867..1821870 - 667 157738044 - Abu_1818 - phosphoglycerol transferase 1775 24.86 0 1821884..1822237 - 117 157738045 dgkA Abu_1819 - diacylglycerol kinase 1776 20.54 -1 1822239..1823012 - 257 157738046 - Abu_1820 - hypothetical protein 1777 24.37 0 1823009..1823923 - 304 157738047 waaM Abu_1821 - lipid A biosynthesis lauroyl acyltransferase 1778 24.38 0 1823916..1824920 - 334 157738048 waaC Abu_1822 - lipopolysaccharide heptosyltransferase I 1779 24.63 0 1824917..1826386 - 489 157738049 gppA Abu_1823 - guanosine pentaphosphate phosphohydrolase (gppA) 1780 32.94 +1 1826386..1826640 - 84 157738050 fdxB Abu_1824 - ferredoxin 1781 23.60 0 1826684..1827433 - 249 157738051 - Abu_1825 - inositol monophosphatase family protein 1782 31.88 +1 1827436..1828812 - 458 157738052 gltD Abu_1826 - glutamate synthase subunit beta 1783 29.98 0 1828818..1833257 - 1479 157738053 gltB Abu_1827 - glutamate synthase, large chain 1784 23.65 0 1833452..1834246 - 264 157738054 - Abu_1828 - hypothetical protein 1785 22.39 -1 1834250..1835035 - 261 157738055 - Abu_1829 - hypothetical protein 1786 26.75 0 1835231..1837615 - 794 157738056 - Abu_1830 - methyl-accepting chemotaxis protein 1787 27.04 0 1838229..1840184 - 651 157738057 - Abu_1831 - methyl-accepting chemotaxis protein 1788 21.64 -1 1840197..1840367 - 56 157738058 - Abu_1832 - hypothetical protein 1789 24.15 0 1840718..1842154 - 478 157738059 gspD Abu_1833 - general secretion pathway protein D 1790 26.18 0 1842184..1842756 - 190 157738060 - Abu_1834 - hypothetical protein 1791 23.46 -1 1842783..1843481 + 232 157738061 tlyA Abu_1835 - hemolysin A 1792 25.53 0 1843450..1844295 + 281 157738062 ribF Abu_1836 - bifunctional riboflavin kinase/FMN adenylyltransferase 1793 25.00 0 1844327..1845034 + 235 157738063 - Abu_1837 - methyltransferase, putative 1794 28.80 0 1845047..1845553 + 168 157738064 bcp Abu_1838 - bacterioferritin comigratory protein, alkyl hydroperoxide reductase/thiol specific antioxidant 1795 25.27 0 1845565..1846569 + 334 157738065 - Abu_1839 - hypothetical protein 1796 31.89 +1 1846569..1847957 + 462 157738066 glcD Abu_1840 - glycolate oxidase 1797 20.36 -1 1847965..1848750 + 261 157738067 rbn Abu_1841 - tRNA-processing ribonuclease BN 1798 22.40 -1 1848747..1849313 - 188 157738068 - Abu_1842 - hypothetical protein 1799 30.65 +1 1849316..1850584 - 422 157738069 murA Abu_1843 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1800 26.78 0 1850702..1851586 + 294 157738070 - Abu_1844 - hypothetical protein 1801 32.59 +1 1851599..1852402 + 267 157738071 kdsA Abu_1845 - 2-dehydro-3-deoxyphosphooctonate aldolase 1802 32.70 +1 1852436..1852906 + 156 157738072 ribH Abu_1846 - riboflavin synthase subunit beta 1803 25.00 0 1852909..1853304 + 131 157738073 nusB Abu_1847 - transcription antitermination protein NusB 1804 27.18 0 1853306..1854004 + 232 157738074 pyrF Abu_1848 - orotidine 5'-phosphate decarboxylase 1805 24.08 0 1854561..1855403 + 280 157738075 - Abu_1851 - ABC transporter, ATP-binding protein 1806 21.62 -1 1855403..1857016 + 537 157738076 - Abu_1852 - hypothetical protein 1807 26.22 0 1857030..1857254 + 74 157738077 feoA Abu_1853 - ferrous iron transport protein A 1808 27.80 0 1857251..1859707 + 818 157738078 feoB2 Abu_1854 - ferrous iron transport protein B 1809 29.37 0 1859751..1860053 + 100 157738079 - Abu_1855 - hypothetical protein 1810 27.85 0 1860074..1860565 - 163 157738080 - Abu_1856 - hypothetical protein 1811 28.09 0 1860576..1862159 - 527 157738081 - Abu_1857 - hypothetical protein 1812 30.07 0 1862168..1862473 - 101 157738082 - Abu_1858 - hypothetical protein 1813 25.28 0 1862602..1864725 - 707 157738083 - Abu_1859 - heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase 1814 27.78 0 1864730..1865071 - 113 157738084 - Abu_1860 - ArsR family transcriptional regulator 1815 29.34 0 1865186..1867312 - 708 157738085 - Abu_1861 - TonB-dependent receptor protein 1816 18.92 -2 1867525..1868079 + 184 157738086 - Abu_1862 - hypothetical protein 1817 25.02 0 1868079..1871159 + 1026 157738087 - Abu_1863 - AcrB/AcrD/AcrF family protein 1818 21.46 -1 1871162..1871860 + 232 157738088 - Abu_1864 - hypothetical protein 1819 20.90 -1 1871860..1873017 + 385 157738089 - Abu_1865 - hypothetical protein 1820 30.14 0 1873224..1873442 + 72 157738090 cspA Abu_1866 - cold-shock protein, DNA-binding 1821 26.95 0 1873476..1873616 + 46 157738091 - Abu_1867 - hypothetical protein 1822 23.13 -1 1873640..1874335 - 231 157738092 - Abu_1868 - two-component response regulator 1823 22.24 -1 1874396..1876099 + 567 157738093 - Abu_1869 - two-component sensor histidine kinase 1824 23.24 -1 1876559..1878094 + 511 157738094 - Abu_1872 - hypothetical protein 1825 20.63 -1 1878625..1879419 + 264 157738095 - Abu_1873 - replication protein 1826 21.11 -1 1879442..1880161 - 239 157738096 - Abu_1874 - hypothetical protein 1827 23.54 0 1880425..1881894 + 489 157738097 - Abu_1875 - hypothetical protein 1828 32.50 +1 1882550..1883146 + 198 157738098 ahpC Abu_1879 - alkyl hydroperoxide reductase/ Thiol specific antioxidant 1829 29.56 0 1883158..1883475 + 105 157738099 trx1 Abu_1880 - thioredoxin 1830 31.60 +1 1883528..1883815 - 95 157738100 - Abu_1881 - hypothetical protein 1831 19.01 -2 1883858..1884241 - 127 157738101 - Abu_1882 - hypothetical protein 1832 30.58 +1 1884277..1888812 - 1511 157738102 rpoC Abu_1883 - DNA-directed RNA polymerase, beta' chain 1833 30.20 0 1888802..1892950 - 1382 157738103 rpoB Abu_1884 - DNA-directed RNA polymerase subunit beta 1834 34.14 +2 1893107..1893478 - 123 157738104 rplL Abu_1885 - 50S ribosomal protein L7/L12 1835 30.67 +1 1893530..1894018 - 162 157738105 rplJ Abu_1886 - 50S ribosomal protein L10 1836 33.62 +1 1894179..1894877 - 232 157738106 rplA Abu_1887 - 50S ribosomal protein L1 1837 30.52 +1 1894953..1895378 - 141 157738107 rplK Abu_1888 - 50S ribosomal protein L11 1838 29.73 0 1895473..1896000 - 175 157738108 nusG Abu_1889 - transcription antitermination protein NusG 1839 20.77 -1 1896010..1896192 - 60 157738109 secE Abu_1890 - preprotein translocase subunit SecE 1840 26.32 0 1896387..1896557 - 56 157738110 rpmG Abu_1892 - 50S ribosomal protein L33 1841 37.30 +2 1896570..1897778 - 402 157738111 tufA Abu_1893 - elongation factor Tu 26.98 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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