version 1.0
Arcobacter butzleri RM4018, complete genome - 1..2341251 2259 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1414 23.01 -1 1447054..1447644 + 196 157737685 - Abu_1444 - putative periplasmic protein 1415 24.97 0 1447644..1450130 + 828 157737686 - Abu_1445 - hypothetical protein 1416 26.60 0 1450130..1450693 + 187 157737687 - Abu_1446 - lysine decarboxylase-like protein 1417 25.63 0 1450870..1451505 + 211 157737688 - Abu_1447 - HAD-superfamily hydrolase 1418 24.87 0 1451502..1452068 - 188 157737689 - Abu_1448 - putative lipoprotein thiredoxin 1419 25.15 0 1452081..1452728 - 215 157737690 dsbA Abu_1449 - DSBA-like thioredoxin domain-containing protein 1420 26.03 0 1452718..1453128 - 136 157737691 dsbB Abu_1450 - DsbB family disulfide bond formation protein 1421 31.20 +1 1453217..1455742 + 841 157737692 - Abu_1451 - glycosyltransferase 1422 24.89 0 1455844..1456317 + 157 157737693 - Abu_1452 - ECF subfamily RNA polymerase sigma factor 1423 23.69 0 1456317..1457156 + 279 157737694 - Abu_1453 - sigma factor regulatory protein FecR/PupR family 1424 29.27 0 1457255..1459570 + 771 157737695 - Abu_1454 - TonB-dependent receptor protein 1425 23.96 0 1459749..1461188 + 479 157737696 - Abu_1455 - GGDEF domain-containing protein 1426 25.76 0 1461133..1462083 + 316 157737697 - Abu_1456 - hypothetical protein 1427 30.92 +1 1462103..1464088 - 661 157737698 betT Abu_1457 - high-affinity choline transport 1428 26.53 0 1464222..1465838 - 538 157737699 kefB Abu_1458 - glutathione-regulated potassium-efflux system protein KefB 1429 25.16 0 1465956..1466261 + 101 157737700 - Abu_1459 - hypothetical protein 1430 32.62 +1 1466335..1467597 + 420 157737701 glyA2 Abu_1460 - serine hydroxymethyltransferase 1431 28.74 0 1467624..1468451 + 275 157737702 ada Abu_1461 - O6-methylguanine-DNA methyltransferase 1432 24.93 0 1468452..1469165 + 237 157737703 - Abu_1462 - endonuclease III 1433 23.12 -1 1469145..1469624 - 159 157737704 - Abu_1463 - ribonuclease H-like protein 1434 22.11 -1 1469661..1469954 - 97 157737705 - Abu_1464 - hypothetical protein 1435 25.12 0 1469951..1470157 - 68 157737706 - Abu_1465 - hypothetical protein 1436 28.06 0 1470264..1470737 - 157 157737707 - Abu_1466 - pyridoxamine 5'-phosphate oxidase-related, FMN-binding 1437 31.79 +1 1470917..1472086 + 389 157737708 benE Abu_1467 - benzoate membrane transport protein 1438 25.66 0 1472128..1473300 - 390 157737709 argD2 Abu_1468 - acetylornithine aminotransferase 1439 27.35 0 1473313..1474014 - 233 157737710 - Abu_1469 - hypothetical protein 1440 30.14 0 1474095..1474970 - 291 157737711 lipA Abu_1470 - lipoyl synthase 1441 26.24 0 1474982..1475686 - 234 157737712 - Abu_1471 - biotin/lipoate A/B protein ligase family protein 1442 31.76 +1 1475844..1478516 + 890 157737713 aceE Abu_1472 - pyruvate dehydrogenase subunit E1 1443 30.74 +1 1478527..1480182 + 551 157737714 aceF Abu_1473 - dihydrolipoamide acetyltransferase 1444 34.24 +2 1480192..1481625 + 477 157737715 lpdA Abu_1474 - dihydrolipoamide dehydrogenase 1445 28.53 0 1481727..1482392 + 221 157737716 - Abu_1475 - glutamine amidotransferase, class I 1446 29.23 0 1482503..1484842 - 779 157737717 - Abu_1476 - TonB-dependent receptor protein 1447 24.97 0 1485112..1485960 - 282 157737718 - Abu_1477 - aldose 1-epimerase family protein, LacX 1448 25.98 0 1485957..1486718 - 253 157737719 - Abu_1478 - beta-lactamase, putative 1449 29.89 0 1486769..1488076 - 435 157737720 rhlE Abu_1479 - ATP-dependent RNA helicase RhlE 1450 28.22 0 1488347..1489540 + 397 157737721 - Abu_1480 - hypothetical protein 1451 27.73 0 1489715..1490695 + 326 157737722 - Abu_1481 - DNA (cytosine-5-)-methyltransferase 1452 20.63 -1 1490703..1491710 + 335 157737723 - Abu_1482 - hypothetical protein 1453 24.92 0 1491861..1492169 - 102 157737724 - Abu_1483 - putative transcriptional regulator 1454 25.03 0 1492319..1493944 + 541 157737725 - Abu_1484 - hypothetical protein 1455 25.40 0 1493979..1494356 + 125 157737726 - Abu_1485 - hypothetical protein 1456 24.89 0 1494359..1494832 + 157 157737727 - Abu_1486 - hypothetical protein 1457 27.49 0 1494858..1497098 - 746 157737728 - Abu_1487 - methyl-accepting chemotaxis protein 1458 27.01 0 1497253..1498059 + 268 157737729 rnhA Abu_1488 - ribonuclease HI 1459 29.31 0 1498111..1499079 + 322 157737730 - Abu_1489 - HMGL family protein 1460 25.41 0 1499107..1499409 - 100 157737731 - Abu_1490 - hypothetical protein 1461 27.49 0 1499449..1499859 - 136 157737732 - Abu_1491 - hypothetical protein 1462 27.41 0 1499985..1501250 - 421 157737733 dinP Abu_1492 - DNA polymerase IV 1463 28.40 0 1501325..1502560 - 411 157737734 moeA1 Abu_1493 - molybdenum cofactor biosynthesis protein A 1464 23.88 0 1502570..1503553 - 327 157737735 - Abu_1494 - cysteine desulfurase 1465 28.18 0 1503546..1504379 - 277 157737736 fdhD Abu_1495 - formate dehydrogenase accessory protein 1466 29.38 0 1504376..1505335 - 319 157737737 fdhC Abu_1496 - putative FdhC protein 1467 34.18 +2 1505344..1505937 - 197 157737738 fdhB1 Abu_1497 - formate dehydrogenase, iron-sulfur subunit FdhB 1468 34.19 +2 1505948..1508749 - 933 157738530 - Abu_1498 - formate dehydrogenase, large subunit FdhA 1469 37.78 +2 1508775..1508999 - 74 157737739 - Abu_1499 - hypothetical protein 1470 25.98 0 1509082..1509693 - 203 157737740 - Abu_1500 - hypothetical protein 1471 26.58 0 1509686..1511359 - 557 157737741 - Abu_1501 - 4Fe-4S ferredoxin, iron-sulfur binding 1472 23.20 -1 1511506..1512660 + 384 157737742 livJ Abu_1502 - leucine/isoleucine/valine-binding protein 1473 21.44 -1 1512657..1514228 + 523 157737743 - Abu_1503 - two-component sensor histidine kinase 1474 22.27 -1 1514236..1514895 + 219 157737744 - Abu_1504 - two-component response regulator 1475 28.95 0 1514888..1516141 + 417 157737745 - Abu_1505 - Mn2+/Fe2+ transporter 1476 24.47 0 1516142..1516423 - 93 157737746 - Abu_1506 - heavy-metal transporting ATPase 1477 22.32 -1 1516427..1516753 - 108 157737747 - Abu_1507 - heavy-metal transport protein 1478 29.41 0 1516750..1517844 - 364 157737748 - Abu_1508 - transglutaminase family protein 1479 29.21 0 1518048..1518992 - 314 157737749 - Abu_1509 - putative FdhC protein 1480 34.18 +2 1519001..1519594 - 197 157737750 fdhB2 Abu_1510 - formate dehydrogenase, iron-sulfur subunit FdhB 1481 34.51 +2 1519605..1522403 - 932 157737751 fdhA2 Abu_1511 - formate dehydrogenase, large subunit FdhA (cysteine containing) 1482 34.67 +2 1522425..1522649 - 74 157737752 - Abu_1512 - formate dehydrogenase subunit E, putative 1483 31.98 +1 1523138..1524175 + 345 157737753 selD Abu_1513 - selenide, water dikinase 1484 22.88 -1 1524217..1524771 - 184 157737754 - Abu_1514 - hypothetical protein 1485 29.02 0 1524949..1525527 + 192 157737755 - Abu_1515 - hypothetical protein 1486 32.06 +1 1525578..1526207 + 209 157737756 - Abu_1516 - hypothetical protein 1487 27.27 0 1526219..1526482 + 87 157737757 - Abu_1517 - hypothetical protein 1488 22.13 -1 1526484..1526858 + 124 157737758 - Abu_1518 - hypothetical protein 1489 28.30 0 1526869..1527921 + 350 157737759 - Abu_1519 - hypothetical protein 1490 30.45 0 1527931..1528416 + 161 157737760 - Abu_1520 - phage-related lysozyme 1491 29.87 0 1528474..1528848 - 124 157737761 - Abu_1521 - hypothetical protein 1492 27.25 0 1528907..1529317 - 136 157737762 - Abu_1522 - Sel1 repeat-containing protein 1493 26.11 0 1529610..1530965 + 451 157737763 selA Abu_1524 - selenocysteine synthase 1494 25.96 0 1530965..1532794 + 609 157737764 selB Abu_1525 - selenocysteine-specific elongation factor 1495 23.96 0 1532798..1534312 + 504 157737765 - Abu_1526 - putative DNA helicase 1496 22.04 -1 1534309..1535247 + 312 157737766 - Abu_1527 - hypothetical protein 1497 23.79 0 1535244..1537307 + 687 157737767 - Abu_1528 - hypothetical protein 1498 21.47 -1 1537354..1538280 + 308 157737768 - Abu_1529 - hypothetical protein 1499 23.07 -1 1538365..1540536 + 723 157737769 - Abu_1530 - hypothetical protein 1500 26.77 0 1540576..1541322 + 248 157737770 - Abu_1531 - hypothetical protein 1501 23.96 0 1541809..1543707 - 632 157737771 - Abu_1536 - two-component sensor histidine kinase 1502 30.59 +1 1543848..1544357 + 169 157737772 - Abu_1537 - putative FMN reductase 1503 26.58 0 1544415..1545791 + 458 157737773 - Abu_1538 - PhoH family protein 1504 23.44 -1 1545860..1547476 + 538 157737774 - Abu_1539 - hypothetical protein 1505 22.73 -1 1547479..1549326 - 615 157737775 - Abu_1540 - EAL/PAS/GGDEF domain-containing protein 1506 30.67 +1 1549302..1549940 + 212 157737776 pdxH Abu_1541 - pyridoxamine 5'-phosphate oxidase 1507 23.65 0 1549946..1552063 - 705 157737777 - Abu_1542 - GGDEF/PAS domain-containing protein 1508 25.79 0 1552101..1553465 - 454 157737778 dbpA Abu_1543 - ATP-dependent RNA helicase DbpA 1509 26.40 0 1553468..1554001 - 177 157737779 - Abu_1544 - hypothetical protein 1510 28.44 0 1554096..1554953 + 285 157737780 - Abu_1545 - hypothetical protein 1511 23.93 0 1554974..1555558 - 194 157737781 - Abu_1546 - hypothetical protein 1512 30.04 0 1555695..1557605 - 636 157737782 htpG Abu_1547 - heat shock protein 90 1513 34.33 +2 1557824..1560031 + 735 157737783 katG Abu_1548 - catalase/peroxidase HPI 26.98 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0