version 1.0
Arcobacter butzleri RM4018, complete genome - 1..2341251 2259 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1383 28.27 0 1412237..1413343 + 368 157737654 - Abu_1413 - hypothetical protein 1384 28.87 0 1413487..1414068 - 193 157737655 - Abu_1414 - hypothetical protein 1385 24.10 0 1414101..1414880 - 259 157737656 - Abu_1415 - hypothetical protein 1386 23.83 0 1414987..1415691 - 234 157737657 - Abu_1416 - hypothetical protein 1387 23.76 0 1415828..1416130 + 100 157737658 - Abu_1417 - hypothetical protein 1388 24.21 0 1416159..1418066 - 635 157737659 - Abu_1418 - hypothetical protein 1389 29.11 0 1418151..1419617 - 488 157737660 thiI Abu_1419 - thiamine biosynthesis protein ThiI 1390 28.68 0 1419705..1419962 + 85 157737661 - Abu_1420 - hypothetical protein 1391 24.43 0 1419972..1420454 - 160 157737662 - Abu_1421 - hypothetical protein 1392 29.21 0 1420480..1421739 - 419 157737663 - Abu_1422 - hypothetical protein 1393 26.13 0 1422129..1424378 - 749 157737664 hypF Abu_1423 - transcriptional regulatory protein HypF 1394 22.84 -1 1424409..1426028 - 539 157737665 - Abu_1424 - hypothetical protein 1395 28.32 0 1426012..1426590 - 192 157737666 hydD Abu_1425 - Ni/Fe hydrogenase, expression/formation protein 1396 27.33 0 1426572..1427237 - 221 157737667 hydC Abu_1426 - Ni/Fe hydrogenase, cytochrome b subunit 1397 30.85 +1 1427259..1428989 - 576 157737668 hydB Abu_1427 - Ni/Fe-hydrogenase, large subunit 1398 34.01 +2 1428979..1430157 - 392 157737669 hydA Abu_1428 - Ni/Fe-hydrogenase, small subunit 1399 21.77 -1 1430395..1431354 - 319 157737670 - Abu_1429 - sigma factor regulatory protein FecR/PupR family 1400 24.11 0 1431357..1431833 - 158 157737671 - Abu_1430 - ECF subfamily RNA polymerase sigma factor 1401 23.66 0 1431933..1433483 - 516 157737672 - Abu_1431 - hypothetical protein 1402 25.38 0 1433449..1434039 - 196 157737673 hyaD Abu_1432 - Ni/Fe hydrogenase, expression/formation protein 1403 31.55 +1 1434128..1434856 - 242 157737674 hyaC Abu_1433 - Ni/Fe hydrogenase, cytochrome b subunit 1404 33.45 +1 1434834..1436576 - 580 157737675 hyaB Abu_1434 - Ni/Fe-hydrogenase, large subunit 1405 36.25 +2 1436576..1437811 - 411 157737676 hyaA Abu_1435 - Ni/Fe-hydrogenase, small subunit 1406 25.78 0 1438045..1439394 - 449 157737677 hupL Abu_1436 - Ni/Fe-dependent hydrogenase, large subunit 1407 27.85 0 1439397..1440290 - 297 157737678 hupS Abu_1437 - Ni/Fe-dependent hydrogenase, small subunit 1408 27.10 0 1440280..1440744 - 154 157737679 - Abu_1438 - TetR family transcriptional regulator 1409 33.57 +1 1440982..1443558 - 858 157737680 acnB Abu_1439 - bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 1410 24.26 0 1443817..1444257 + 146 157737681 - Abu_1440 - thioesterase/acetyltransferase, putative 1411 24.70 0 1444247..1445242 - 331 157737682 - Abu_1441 - GGDEF/PAS domain-containing protein 1412 30.92 +1 1445461..1446207 - 248 157737683 - Abu_1442 - hypothetical protein 1413 27.42 0 1446307..1447050 + 247 157737684 - Abu_1443 - VacJ-like lipoprotein 1414 23.01 -1 1447054..1447644 + 196 157737685 - Abu_1444 - putative periplasmic protein 1415 24.97 0 1447644..1450130 + 828 157737686 - Abu_1445 - hypothetical protein 1416 26.60 0 1450130..1450693 + 187 157737687 - Abu_1446 - lysine decarboxylase-like protein 1417 25.63 0 1450870..1451505 + 211 157737688 - Abu_1447 - HAD-superfamily hydrolase 1418 24.87 0 1451502..1452068 - 188 157737689 - Abu_1448 - putative lipoprotein thiredoxin 1419 25.15 0 1452081..1452728 - 215 157737690 dsbA Abu_1449 - DSBA-like thioredoxin domain-containing protein 1420 26.03 0 1452718..1453128 - 136 157737691 dsbB Abu_1450 - DsbB family disulfide bond formation protein 1421 31.20 +1 1453217..1455742 + 841 157737692 - Abu_1451 - glycosyltransferase 1422 24.89 0 1455844..1456317 + 157 157737693 - Abu_1452 - ECF subfamily RNA polymerase sigma factor 1423 23.69 0 1456317..1457156 + 279 157737694 - Abu_1453 - sigma factor regulatory protein FecR/PupR family 1424 29.27 0 1457255..1459570 + 771 157737695 - Abu_1454 - TonB-dependent receptor protein 1425 23.96 0 1459749..1461188 + 479 157737696 - Abu_1455 - GGDEF domain-containing protein 1426 25.76 0 1461133..1462083 + 316 157737697 - Abu_1456 - hypothetical protein 1427 30.92 +1 1462103..1464088 - 661 157737698 betT Abu_1457 - high-affinity choline transport 1428 26.53 0 1464222..1465838 - 538 157737699 kefB Abu_1458 - glutathione-regulated potassium-efflux system protein KefB 1429 25.16 0 1465956..1466261 + 101 157737700 - Abu_1459 - hypothetical protein 1430 32.62 +1 1466335..1467597 + 420 157737701 glyA2 Abu_1460 - serine hydroxymethyltransferase 1431 28.74 0 1467624..1468451 + 275 157737702 ada Abu_1461 - O6-methylguanine-DNA methyltransferase 1432 24.93 0 1468452..1469165 + 237 157737703 - Abu_1462 - endonuclease III 1433 23.12 -1 1469145..1469624 - 159 157737704 - Abu_1463 - ribonuclease H-like protein 1434 22.11 -1 1469661..1469954 - 97 157737705 - Abu_1464 - hypothetical protein 1435 25.12 0 1469951..1470157 - 68 157737706 - Abu_1465 - hypothetical protein 1436 28.06 0 1470264..1470737 - 157 157737707 - Abu_1466 - pyridoxamine 5'-phosphate oxidase-related, FMN-binding 1437 31.79 +1 1470917..1472086 + 389 157737708 benE Abu_1467 - benzoate membrane transport protein 1438 25.66 0 1472128..1473300 - 390 157737709 argD2 Abu_1468 - acetylornithine aminotransferase 1439 27.35 0 1473313..1474014 - 233 157737710 - Abu_1469 - hypothetical protein 1440 30.14 0 1474095..1474970 - 291 157737711 lipA Abu_1470 - lipoyl synthase 1441 26.24 0 1474982..1475686 - 234 157737712 - Abu_1471 - biotin/lipoate A/B protein ligase family protein 1442 31.76 +1 1475844..1478516 + 890 157737713 aceE Abu_1472 - pyruvate dehydrogenase subunit E1 1443 30.74 +1 1478527..1480182 + 551 157737714 aceF Abu_1473 - dihydrolipoamide acetyltransferase 1444 34.24 +2 1480192..1481625 + 477 157737715 lpdA Abu_1474 - dihydrolipoamide dehydrogenase 1445 28.53 0 1481727..1482392 + 221 157737716 - Abu_1475 - glutamine amidotransferase, class I 1446 29.23 0 1482503..1484842 - 779 157737717 - Abu_1476 - TonB-dependent receptor protein 1447 24.97 0 1485112..1485960 - 282 157737718 - Abu_1477 - aldose 1-epimerase family protein, LacX 1448 25.98 0 1485957..1486718 - 253 157737719 - Abu_1478 - beta-lactamase, putative 1449 29.89 0 1486769..1488076 - 435 157737720 rhlE Abu_1479 - ATP-dependent RNA helicase RhlE 1450 28.22 0 1488347..1489540 + 397 157737721 - Abu_1480 - hypothetical protein 1451 27.73 0 1489715..1490695 + 326 157737722 - Abu_1481 - DNA (cytosine-5-)-methyltransferase 1452 20.63 -1 1490703..1491710 + 335 157737723 - Abu_1482 - hypothetical protein 1453 24.92 0 1491861..1492169 - 102 157737724 - Abu_1483 - putative transcriptional regulator 1454 25.03 0 1492319..1493944 + 541 157737725 - Abu_1484 - hypothetical protein 1455 25.40 0 1493979..1494356 + 125 157737726 - Abu_1485 - hypothetical protein 1456 24.89 0 1494359..1494832 + 157 157737727 - Abu_1486 - hypothetical protein 1457 27.49 0 1494858..1497098 - 746 157737728 - Abu_1487 - methyl-accepting chemotaxis protein 1458 27.01 0 1497253..1498059 + 268 157737729 rnhA Abu_1488 - ribonuclease HI 1459 29.31 0 1498111..1499079 + 322 157737730 - Abu_1489 - HMGL family protein 1460 25.41 0 1499107..1499409 - 100 157737731 - Abu_1490 - hypothetical protein 1461 27.49 0 1499449..1499859 - 136 157737732 - Abu_1491 - hypothetical protein 1462 27.41 0 1499985..1501250 - 421 157737733 dinP Abu_1492 - DNA polymerase IV 1463 28.40 0 1501325..1502560 - 411 157737734 moeA1 Abu_1493 - molybdenum cofactor biosynthesis protein A 1464 23.88 0 1502570..1503553 - 327 157737735 - Abu_1494 - cysteine desulfurase 1465 28.18 0 1503546..1504379 - 277 157737736 fdhD Abu_1495 - formate dehydrogenase accessory protein 1466 29.38 0 1504376..1505335 - 319 157737737 fdhC Abu_1496 - putative FdhC protein 1467 34.18 +2 1505344..1505937 - 197 157737738 fdhB1 Abu_1497 - formate dehydrogenase, iron-sulfur subunit FdhB 1468 34.19 +2 1505948..1508749 - 933 157738530 - Abu_1498 - formate dehydrogenase, large subunit FdhA 1469 37.78 +2 1508775..1508999 - 74 157737739 - Abu_1499 - hypothetical protein 1470 25.98 0 1509082..1509693 - 203 157737740 - Abu_1500 - hypothetical protein 1471 26.58 0 1509686..1511359 - 557 157737741 - Abu_1501 - 4Fe-4S ferredoxin, iron-sulfur binding 1472 23.20 -1 1511506..1512660 + 384 157737742 livJ Abu_1502 - leucine/isoleucine/valine-binding protein 1473 21.44 -1 1512657..1514228 + 523 157737743 - Abu_1503 - two-component sensor histidine kinase 1474 22.27 -1 1514236..1514895 + 219 157737744 - Abu_1504 - two-component response regulator 1475 28.95 0 1514888..1516141 + 417 157737745 - Abu_1505 - Mn2+/Fe2+ transporter 1476 24.47 0 1516142..1516423 - 93 157737746 - Abu_1506 - heavy-metal transporting ATPase 1477 22.32 -1 1516427..1516753 - 108 157737747 - Abu_1507 - heavy-metal transport protein 1478 29.41 0 1516750..1517844 - 364 157737748 - Abu_1508 - transglutaminase family protein 1479 29.21 0 1518048..1518992 - 314 157737749 - Abu_1509 - putative FdhC protein 1480 34.18 +2 1519001..1519594 - 197 157737750 fdhB2 Abu_1510 - formate dehydrogenase, iron-sulfur subunit FdhB 1481 34.51 +2 1519605..1522403 - 932 157737751 fdhA2 Abu_1511 - formate dehydrogenase, large subunit FdhA (cysteine containing) 1482 34.67 +2 1522425..1522649 - 74 157737752 - Abu_1512 - formate dehydrogenase subunit E, putative 26.98 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0