version 1.0
Aquifex aeolicus VF5, complete genome - 1..1551335 1529 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 534 46.09 0 524140..524829 - 229 15606142 - aq_756 - hypothetical protein 535 43.89 0 524822..525361 - 179 15606143 - aq_757 - hypothetical protein 536 44.38 0 525358..525855 - 165 15606144 - aq_758 - hypothetical protein 537 45.11 0 525855..526304 - 149 15606145 - aq_759 - prefoldin subunit alpha 538 48.49 +1 526457..528310 + 617 15606146 gidA1 aq_761 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 539 44.67 0 528310..529191 + 293 15606147 genX aq_763 - lysyl-tRNA synthetase 540 44.96 0 529169..529942 - 257 15606148 iclR aq_764 - IclR family transcriptional regulator 541 41.37 0 529976..531418 + 480 15606149 - aq_765 - hypothetical protein 542 38.71 -1 531396..532250 + 284 15606150 - aq_766 - hypothetical protein 543 44.62 0 532257..532823 + 188 15606151 - aq_768 - hypothetical protein 544 44.68 0 532826..533821 + 331 15606152 purM aq_769 - phosphoribosylaminoimidazole synthetase 545 43.36 0 533978..534436 + 152 15606153 - aq_770 - hypothetical protein 546 43.61 0 534466..534825 + 119 15606154 - aq_771 - hypothetical protein 547 45.69 0 534837..535613 + 258 15606155 tly aq_773 - hemolysin 548 42.81 0 535610..536590 + 326 15606156 - aq_775 - hypothetical protein 549 45.92 0 536587..538119 - 510 15606157 nadB aq_777 - L-aspartate oxidase 550 45.29 0 538097..539083 - 328 15606158 - aq_778 - hypothetical protein 551 37.04 -1 539080..539592 - 170 15606159 - aq_780 - hypothetical protein 552 48.40 +1 539585..540865 - 426 15606160 hisD aq_782 - histidinol dehydrogenase 553 47.45 +1 541304..544306 - 1000 15606161 acrD4 aq_786 - AcrB/AcrD/AcrF family cation efflux protein 554 45.73 0 544376..545545 + 389 15606162 - aq_788 - hypothetical protein 555 45.58 0 545563..546648 + 361 15606163 - aq_789 - hypothetical protein 556 43.90 0 546645..547136 + 163 15606164 - aq_791 - hypothetical protein 557 46.51 0 547161..547661 + 166 15606165 cycB1 aq_792 - cytochrome c552 558 47.06 0 547720..547923 + 67 15606166 rpmI aq_792a - ribosomal protein L35 559 43.33 0 547898..549907 - 669 15606167 rep aq_793 - ATP-dependent DNA helicase REP 560 42.61 0 549949..550347 + 132 15606168 - aq_796 - hypothetical protein 561 45.64 0 550344..551570 + 408 15606169 prc aq_797 - carboxyl-terminal protease 562 46.33 0 551567..552574 + 335 15606170 gcp aq_801 - sialoglycoprotease 563 47.37 +1 552695..553549 + 284 15606171 mbhS3 aq_802 - hydrogenase small subunit 564 43.80 0 553539..554789 + 416 15606172 mbhL3 aq_804 - hydrogenase large subunit 565 41.03 0 554790..555257 - 155 15606173 - aq_805 - hypothetical protein 566 46.65 0 555261..556529 - 422 15606174 pyrC aq_806 - dihydroorotase 567 44.26 0 556543..557457 - 304 15606175 - aq_808 - hypothetical protein 568 43.96 0 557454..558272 - 272 15606176 - aq_809 - hypothetical protein 569 40.00 0 558269..558718 - 149 15606177 - aq_811 - hypothetical protein 570 34.78 -2 558785..559891 + 368 15606178 - aq_812 - hypothetical protein 571 42.28 0 559888..560256 - 122 15606179 acpS aq_813 - holo-[acyl-carrier protein] synthase 572 46.71 0 560253..561119 - 288 15606180 - aq_814 - hypothetical protein 573 42.07 0 561119..562285 - 388 15606181 dfp aq_815 - pantothenate metabolism flavoprotein 574 48.71 +1 562310..563584 + 424 15606182 gsa aq_816 - glutamate-1-semialdehyde aminotransferase 575 43.90 0 563588..564562 + 324 15606183 - aq_818 - hypothetical protein 576 38.11 -1 564520..565839 + 439 15606184 lnt aq_819 - apolipoprotein N-acyltransferase 577 36.85 -1 565822..566418 - 198 15606185 - aq_820 - hypothetical protein 578 38.71 -1 566408..567745 - 445 15606186 murF aq_821 - UDP-MurNAc-pentapeptide sythetase 579 44.14 0 573050..573706 + 218 15606187 exsB aq_831 - trans-regulatory protein ExsB 580 44.44 0 573689..574444 - 251 15606188 surE aq_832 - stationary phase survival protein SurE 581 37.35 -1 574448..575119 - 223 15606189 flgA aq_833 - flagellar protein FlgA 582 47.15 +1 575049..575837 - 262 15606190 flgG2 aq_834 - flagellar hook basal-body protein FlgG 583 44.98 0 575881..577305 + 474 15606191 nox aq_835 - NADH oxidase 584 44.35 0 577262..577960 - 232 15606192 - aq_836 - hypothetical protein 585 49.10 +1 578040..579707 + 555 15606193 ilvD aq_837 - dihydroxyacid dehydratase 586 44.53 0 579704..580882 - 392 15606194 trm1 aq_841 - N(2),N(2)-dimethylguanosine tRNA methyltransferase 587 41.29 0 580901..581302 + 133 15606195 - aq_843 - hypothetical protein 588 43.33 0 581303..583393 - 696 15606196 spoT aq_844 - (p)ppGpp 3-pyrophosphohydrolase 589 48.25 +1 583431..584456 + 341 15606197 mreB aq_845 - rod shape determining protein MreB 590 40.88 0 584453..585247 + 264 15606198 - aq_847 - hypothetical protein 591 41.44 0 585510..585842 + 110 15606199 - aq_848 - hypothetical protein 592 45.96 0 586081..587379 - 432 15606200 - aq_849 - hypothetical protein 593 35.97 -2 587390..587806 - 138 15606201 - aq_850 - hypothetical protein 594 40.94 0 587797..588756 - 319 15606202 corA aq_851 - Mg(2+) and Co(2+) transport protein 595 43.82 0 588743..589705 - 320 15606203 pdxA aq_852 - pyridoxal phosphate biosynthetic protein PdxA 596 45.22 0 589698..590042 - 114 15606204 - aq_853 - hypothetical protein 597 41.88 0 590053..591690 - 545 15606205 - aq_854 - hypothetical protein 598 42.17 0 591687..592580 - 297 15606206 - aq_855 - hypothetical protein 599 43.16 0 592596..593246 + 216 15606207 purN aq_857 - phosphoribosylglycinamide formyltransferase 600 48.13 +1 593526..594194 - 222 15606208 ahpC2 aq_858 - alkyl hydroperoxide reductase 601 45.15 0 594616..594945 - 109 15606209 - aq_862 - hypothetical protein 602 43.78 0 594938..597961 - 1007 15606210 - aq_863 - hypothetical protein 603 44.29 0 597975..600338 - 787 15606211 nuoL2 aq_866 - NADH dehydrogenase I chain L 604 40.20 0 600393..600596 - 67 15606212 rpsU aq_867a - ribosomal protein S21 605 44.12 0 600882..601706 - 274 15606213 nadC aq_869 - quinolinate phosphoribosyl transferase 606 44.69 0 601852..603198 + 448 15606214 trmE aq_871 - tRNA modification GTPase TrmE 607 46.68 0 603214..604524 + 436 15606215 rho aq_873 - transcription termination factor Rho 608 44.44 0 604575..604781 + 68 15607141 rpmE aq_873a - ribosomal protein L31 609 44.44 0 604785..605873 + 362 15606216 prfA aq_876 - peptide chain release factor RF-1 610 43.22 0 606111..606899 - 262 15606217 minD2 aq_877 - septum site-determining protein MinD 611 41.42 0 606878..607483 - 201 15606218 minC aq_878 - septum site-determining protein MinC 612 45.94 0 607507..608085 + 192 15606219 - aq_880 - hypothetical protein 613 48.81 +1 608082..609968 - 628 15606220 - aq_881 - 1-deoxy-D-xylulose-5-phosphate synthase 614 45.66 0 610406..613846 - 1146 15606221 topG2 aq_886 - reverse gyrase 615 46.53 0 613977..614423 + 148 15606222 - aq_888 - hypothetical protein 616 46.77 0 614467..615270 + 267 15606223 - aq_890 - hypothetical protein 617 44.41 0 615250..616188 - 312 15606224 ppx aq_891 - exopolyphosphatase 618 48.83 +1 616148..617128 + 326 15606225 fabD aq_892 - malonyl-CoA:Acyl carrier protein transacylase 619 45.19 0 617125..617976 + 283 15606226 - aq_893 - hypothetical protein 620 45.97 0 617965..618969 - 334 15606227 queA aq_894 - queuosine biosynthesis protein 621 49.29 +1 618982..619896 - 304 15606228 ispB aq_895 - octoprenyl-diphosphate synthase 622 45.99 0 620083..620556 + 157 15606229 nifU aq_896 - NifU protein 623 48.28 +1 620558..621313 + 251 15606230 - aq_898 - hypothetical protein 624 47.15 +1 621274..621606 + 110 15606231 - aq_899 - hypothetical protein 625 44.35 0 621726..622097 + 123 15606232 - aq_900 - hypothetical protein 626 42.22 0 622364..623173 + 269 15606233 aroE aq_901 - shikimate 5-dehydrogenase 627 40.13 0 623166..623621 + 151 15606234 - aq_903 - hypothetical protein 628 44.31 0 623622..624131 + 169 15606235 - aq_904 - hypothetical protein 629 37.87 -1 624284..625825 - 513 15606236 hksP3 aq_905 - histidine kinase sensor protein 630 45.05 0 625818..626483 - 221 15606237 phoU aq_906 - transcriptional regulator (PhoU-like) 631 51.04 +2 626498..627073 + 191 15606238 gmhA aq_908 - phosphoheptose isomerase 632 43.76 0 627058..627882 + 274 15606239 - aq_909 - hypothetical protein 633 44.35 0 627868..628575 - 235 15606240 dnaC aq_910 - DNA replication protein DnaC 43.45 MEAN 3.70 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0