version 1.0
Aquifex aeolicus VF5, complete genome - 1..1551335 1529 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 502 34.88 -2 487132..487647 - 171 15606110 - aq_711 - hypothetical protein 503 43.96 0 487644..488198 - 184 15606111 frr aq_712 - ribosome recycling factor 504 47.86 +1 488204..488926 - 240 15606112 pyrH aq_713 - UMP kinase 505 45.59 0 488926..489798 - 290 15606113 tsf aq_715 - elongation factor Ts 506 39.64 -1 489875..491269 - 464 15606114 - aq_716 - hypothetical protein 507 42.62 0 491380..493458 + 692 15606115 glgP aq_717 - glycogen phosphorylase 508 43.19 0 493455..495950 + 831 15606116 mpg aq_718 - mannose-1-phosphate guanyltransferase 509 42.12 0 495947..497380 + 477 15606117 - aq_720 - hypothetical protein 510 42.60 0 497377..498768 + 463 15606118 glgA aq_721 - glycogen synthase 511 46.38 0 498743..500635 + 630 15606119 glgB aq_722 - glycogen branching enzyme 512 42.04 0 500632..502089 + 485 15606120 malM aq_723 - 4-alpha-glucanotransferase (amylomaltase) 513 41.35 0 502101..504608 + 835 15606121 ctrA1 aq_724 - cation transporter E1-E2 family ATPase 514 40.40 0 504614..505618 + 334 15606122 ldhA aq_727 - D-lactate dehydrogenase 515 44.50 0 505654..506826 + 390 15606123 speC aq_728 - ornithine decarboxylase 516 44.38 0 506732..507745 + 337 15606124 - aq_729 - hypothetical protein 517 45.08 0 507757..508590 + 277 15606125 ccdA aq_731 - cytochrome c-type biogenesis protein 518 44.71 0 508590..509213 + 207 15606126 hisH aq_732 - amidotransferase HisH 519 50.93 +2 509203..509685 - 160 15606127 rpsG2 aq_734 - 30S ribosomal protein S7 520 47.80 +1 509689..510075 - 128 15606128 rpsL aq_735 - 30S ribosomal protein S12 521 48.28 +1 510161..511558 + 465 15606129 lpdA aq_736 - dihydrolipoamide dehydrogenase 522 47.49 +1 511622..512716 + 364 15606130 - aq_737 - hypothetical protein 523 47.91 +1 512737..513957 + 406 15606131 nifS2 aq_739 - FeS cluster formation protein NifS 524 39.45 -1 513969..515030 + 353 15606132 - aq_740 - hypothetical protein 525 44.71 0 515011..516285 - 424 15606133 purD aq_742 - phosphoribosylamine-glycine ligase 526 43.69 0 516321..517421 + 366 15606134 pilT aq_745 - twitching motility protein PilT 527 42.14 0 517421..518647 + 408 15606135 pilC1 aq_747 - fimbrial assembly protein PilC 528 41.57 0 518640..519428 - 262 15606136 ispA aq_748 - geranylgeranyl pyrophosphate synthase 529 41.87 0 519442..520167 - 241 15606137 truA aq_749 - pseudouridine synthase I 530 43.93 0 520160..521122 - 320 15606138 pgi aq_750 - bifunctional phosphoglucose/phosphomannose isomerase 531 45.76 0 521156..523126 - 656 15606139 - aq_752 - hypothetical protein 532 43.33 0 523123..523422 - 99 15606140 - aq_754 - hypothetical protein 533 43.35 0 523415..524143 - 242 15606141 - aq_755 - hypothetical protein 534 46.09 0 524140..524829 - 229 15606142 - aq_756 - hypothetical protein 535 43.89 0 524822..525361 - 179 15606143 - aq_757 - hypothetical protein 536 44.38 0 525358..525855 - 165 15606144 - aq_758 - hypothetical protein 537 45.11 0 525855..526304 - 149 15606145 - aq_759 - prefoldin subunit alpha 538 48.49 +1 526457..528310 + 617 15606146 gidA1 aq_761 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 539 44.67 0 528310..529191 + 293 15606147 genX aq_763 - lysyl-tRNA synthetase 540 44.96 0 529169..529942 - 257 15606148 iclR aq_764 - IclR family transcriptional regulator 541 41.37 0 529976..531418 + 480 15606149 - aq_765 - hypothetical protein 542 38.71 -1 531396..532250 + 284 15606150 - aq_766 - hypothetical protein 543 44.62 0 532257..532823 + 188 15606151 - aq_768 - hypothetical protein 544 44.68 0 532826..533821 + 331 15606152 purM aq_769 - phosphoribosylaminoimidazole synthetase 545 43.36 0 533978..534436 + 152 15606153 - aq_770 - hypothetical protein 546 43.61 0 534466..534825 + 119 15606154 - aq_771 - hypothetical protein 547 45.69 0 534837..535613 + 258 15606155 tly aq_773 - hemolysin 548 42.81 0 535610..536590 + 326 15606156 - aq_775 - hypothetical protein 549 45.92 0 536587..538119 - 510 15606157 nadB aq_777 - L-aspartate oxidase 550 45.29 0 538097..539083 - 328 15606158 - aq_778 - hypothetical protein 551 37.04 -1 539080..539592 - 170 15606159 - aq_780 - hypothetical protein 552 48.40 +1 539585..540865 - 426 15606160 hisD aq_782 - histidinol dehydrogenase 553 47.45 +1 541304..544306 - 1000 15606161 acrD4 aq_786 - AcrB/AcrD/AcrF family cation efflux protein 554 45.73 0 544376..545545 + 389 15606162 - aq_788 - hypothetical protein 555 45.58 0 545563..546648 + 361 15606163 - aq_789 - hypothetical protein 556 43.90 0 546645..547136 + 163 15606164 - aq_791 - hypothetical protein 557 46.51 0 547161..547661 + 166 15606165 cycB1 aq_792 - cytochrome c552 558 47.06 0 547720..547923 + 67 15606166 rpmI aq_792a - ribosomal protein L35 559 43.33 0 547898..549907 - 669 15606167 rep aq_793 - ATP-dependent DNA helicase REP 560 42.61 0 549949..550347 + 132 15606168 - aq_796 - hypothetical protein 561 45.64 0 550344..551570 + 408 15606169 prc aq_797 - carboxyl-terminal protease 562 46.33 0 551567..552574 + 335 15606170 gcp aq_801 - sialoglycoprotease 563 47.37 +1 552695..553549 + 284 15606171 mbhS3 aq_802 - hydrogenase small subunit 564 43.80 0 553539..554789 + 416 15606172 mbhL3 aq_804 - hydrogenase large subunit 565 41.03 0 554790..555257 - 155 15606173 - aq_805 - hypothetical protein 566 46.65 0 555261..556529 - 422 15606174 pyrC aq_806 - dihydroorotase 567 44.26 0 556543..557457 - 304 15606175 - aq_808 - hypothetical protein 568 43.96 0 557454..558272 - 272 15606176 - aq_809 - hypothetical protein 569 40.00 0 558269..558718 - 149 15606177 - aq_811 - hypothetical protein 570 34.78 -2 558785..559891 + 368 15606178 - aq_812 - hypothetical protein 571 42.28 0 559888..560256 - 122 15606179 acpS aq_813 - holo-[acyl-carrier protein] synthase 572 46.71 0 560253..561119 - 288 15606180 - aq_814 - hypothetical protein 573 42.07 0 561119..562285 - 388 15606181 dfp aq_815 - pantothenate metabolism flavoprotein 574 48.71 +1 562310..563584 + 424 15606182 gsa aq_816 - glutamate-1-semialdehyde aminotransferase 575 43.90 0 563588..564562 + 324 15606183 - aq_818 - hypothetical protein 576 38.11 -1 564520..565839 + 439 15606184 lnt aq_819 - apolipoprotein N-acyltransferase 577 36.85 -1 565822..566418 - 198 15606185 - aq_820 - hypothetical protein 578 38.71 -1 566408..567745 - 445 15606186 murF aq_821 - UDP-MurNAc-pentapeptide sythetase 579 44.14 0 573050..573706 + 218 15606187 exsB aq_831 - trans-regulatory protein ExsB 580 44.44 0 573689..574444 - 251 15606188 surE aq_832 - stationary phase survival protein SurE 581 37.35 -1 574448..575119 - 223 15606189 flgA aq_833 - flagellar protein FlgA 582 47.15 +1 575049..575837 - 262 15606190 flgG2 aq_834 - flagellar hook basal-body protein FlgG 583 44.98 0 575881..577305 + 474 15606191 nox aq_835 - NADH oxidase 584 44.35 0 577262..577960 - 232 15606192 - aq_836 - hypothetical protein 585 49.10 +1 578040..579707 + 555 15606193 ilvD aq_837 - dihydroxyacid dehydratase 586 44.53 0 579704..580882 - 392 15606194 trm1 aq_841 - N(2),N(2)-dimethylguanosine tRNA methyltransferase 587 41.29 0 580901..581302 + 133 15606195 - aq_843 - hypothetical protein 588 43.33 0 581303..583393 - 696 15606196 spoT aq_844 - (p)ppGpp 3-pyrophosphohydrolase 589 48.25 +1 583431..584456 + 341 15606197 mreB aq_845 - rod shape determining protein MreB 590 40.88 0 584453..585247 + 264 15606198 - aq_847 - hypothetical protein 591 41.44 0 585510..585842 + 110 15606199 - aq_848 - hypothetical protein 592 45.96 0 586081..587379 - 432 15606200 - aq_849 - hypothetical protein 593 35.97 -2 587390..587806 - 138 15606201 - aq_850 - hypothetical protein 594 40.94 0 587797..588756 - 319 15606202 corA aq_851 - Mg(2+) and Co(2+) transport protein 595 43.82 0 588743..589705 - 320 15606203 pdxA aq_852 - pyridoxal phosphate biosynthetic protein PdxA 596 45.22 0 589698..590042 - 114 15606204 - aq_853 - hypothetical protein 597 41.88 0 590053..591690 - 545 15606205 - aq_854 - hypothetical protein 598 42.17 0 591687..592580 - 297 15606206 - aq_855 - hypothetical protein 599 43.16 0 592596..593246 + 216 15606207 purN aq_857 - phosphoribosylglycinamide formyltransferase 600 48.13 +1 593526..594194 - 222 15606208 ahpC2 aq_858 - alkyl hydroperoxide reductase 601 45.15 0 594616..594945 - 109 15606209 - aq_862 - hypothetical protein 43.45 MEAN 3.70 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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