version 1.0
Aquifex aeolicus VF5, complete genome - 1..1551335 1529 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 425 35.36 -2 397306..399423 + 705 15606033 - aq_585 - hypothetical protein 426 45.17 0 399420..400712 - 430 15606034 neaC aq_587 - N-ethylammeline chlorohydrolase 427 43.98 0 400746..402107 + 453 15606035 xanB aq_589 - mannose-6-phosphate isomerase/mannose-1-phosphate guanyl transferase 428 43.11 0 402088..403089 + 333 15606036 - aq_591 - hypothetical protein 429 39.73 -1 403186..404499 + 437 15606037 - aq_592 - hypothetical protein 430 48.02 +1 404496..406211 - 571 15606038 frdA aq_594 - fumarate reductase flavoprotein subunit 431 44.75 0 406507..407820 - 437 15606039 purB aq_597 - adenylosuccinate lyase 432 44.53 0 407862..408254 - 130 15606040 - aq_598 - hypothetical protein 433 37.01 -1 408354..409550 + 398 15606041 rpoN aq_599 - RNA polymerase sigma factor RpoN 434 44.10 0 409567..410049 - 160 15606042 - aq_600 - hypothetical protein 435 40.60 0 410406..410942 + 178 15606043 - aq_601 - hypothetical protein 436 41.76 0 411154..411972 + 272 15606044 - aq_603 - hypothetical protein 437 48.60 +1 412006..412791 + 261 15606045 lpxA aq_604 - UDP-N-acetylglucosamine acyltransferase 438 45.30 0 412805..414199 + 464 15606046 glmU aq_607 - UDP-N-acetylglucosamine pyrophosphorylase 439 46.67 0 414196..415425 - 409 15606047 thrC1 aq_608 - threonine synthase 440 45.91 0 415436..416548 - 370 15606048 - aq_609 - translation-associated GTPase 441 42.74 0 417224..418105 - 293 15606049 deaD aq_613 - ATP-dependent RNA helicase DeaD 442 47.62 +1 418639..419037 + 132 15606050 - aq_615 - hypothetical protein 443 43.25 0 419071..419574 + 167 15606051 - aq_616 - hypothetical protein 444 45.04 0 419585..420088 + 167 15606052 pfpI aq_618 - protease I 445 39.67 -1 420088..420924 + 278 15606053 yfeA aq_619 - adhesion B precursor 446 41.92 0 420915..421613 + 232 15606054 abcT2 aq_620 - ABC transporter 447 44.95 0 421671..422402 + 243 15606055 - aq_621 - hypothetical protein 448 42.78 0 422376..423338 - 320 15606056 - aq_622 - hypothetical protein 449 44.34 0 423373..425553 + 726 15606057 mrcA aq_624 - penicillin binding protein 1A 450 37.61 -1 425550..426671 + 373 15606058 bioF aq_626 - 8-amino-7-oxononanoate synthase 451 43.47 0 426668..427594 - 308 15606059 - aq_627 - hypothetical protein 452 42.59 0 427634..428011 - 125 15606060 - aq_628 - hypothetical protein 453 37.11 -1 428466..431936 - 1156 15606061 xcpC aq_629 - chromosome assembly protein 454 45.18 0 432190..433143 - 317 15606062 - aq_632 - hypothetical protein 455 44.38 0 433166..435328 + 720 15606063 ligA aq_633 - DNA ligase (NAD dependent) 456 40.09 0 435320..435748 - 142 15606064 - aq_635 - hypothetical protein 457 40.13 0 436576..437487 - 303 15606065 lysR1 aq_638 - LysR family transcriptional regulator 458 42.35 0 438038..438991 + 317 15606066 thy aq_640 - thymidylate synthase complementing protein 459 44.04 0 439003..440085 - 360 15606067 - aq_642 - RNA 3'-terminal-phosphate cyclase 460 40.64 0 440091..440774 - 227 15606068 - aq_644 - hypothetical protein 461 33.11 -2 440821..442143 + 440 15606069 - aq_645 - hypothetical protein 462 30.57 -2 442506..443915 + 469 15606070 - aq_647 - hypothetical protein 463 45.16 0 444064..445179 + 371 15606071 - aq_648 - hypothetical protein 464 39.53 -1 445163..445759 - 198 15606072 - aq_651 - hypothetical protein 465 36.76 -1 445756..446805 - 349 15606073 nlpD1 aq_652 - lipoprotein 466 43.87 0 447062..448048 - 328 15606074 fliG aq_653 - flagellar switch protein FliG 467 43.72 0 448050..448742 - 230 15606075 frdB2 aq_655 - fumarate reductase iron-sulfur subunit 468 43.68 0 448782..450404 + 540 15606076 topA aq_657 - topoisomerase I 469 48.87 +1 450916..451977 + 353 15606077 mbhS1 aq_660 - hydrogenase small subunit 470 49.05 +1 451992..453893 + 633 15606078 mbhL1 aq_662 - hydrogenase large subunit 471 43.38 0 453886..454572 + 228 15606079 hoxZ aq_665 - Ni/Fe hydrogenase B-type cytochrome subunit 472 48.80 +1 454585..455127 + 180 15606080 hupE aq_666 - HupE hydrogenase related function 473 43.97 0 455140..455628 + 162 15606081 hupD aq_667 - HupD hydrogenase related function 474 40.12 0 455615..455953 + 112 15606082 - aq_668 - hypothetical protein 475 41.16 0 455947..456342 + 131 15606083 - aq_669 - hypothetical protein 476 46.15 0 456335..457114 + 259 15606084 hypB aq_671 - hydrogenase expression/formation protein B 477 44.67 0 457083..459323 + 746 15606085 hypF aq_672 - transcriptional regulatory protein HypF 478 45.61 0 459334..459732 + 132 15606086 atpC aq_673 - ATP synthase F1 epsilon subunit 479 40.00 0 459716..460435 + 239 15606087 - aq_674 - hypothetical protein 480 46.63 0 460432..461010 - 192 15606088 - aq_676 - hypothetical protein 481 38.34 -1 461021..461599 - 192 15606089 - aq_678 - hypothetical protein 482 47.88 +1 461663..463174 + 503 15606090 atpA aq_679 - F0F1 ATP synthase subunit alpha 483 43.66 0 463190..464380 - 396 15606091 arsA1 aq_682 - anion transporting ATPase 484 45.47 0 464435..465184 + 249 15606092 - aq_684 - hypothetical protein 485 44.60 0 465181..465615 + 144 15606093 arsC aq_685 - arsenate reductase 486 48.04 +1 465627..468407 + 926 15606094 uvrA aq_686 - repair excision nuclease subunit A 487 37.69 -1 468404..469414 - 336 15606095 - aq_689 - hypothetical protein 488 47.83 +1 469427..470764 - 445 15606096 gidA2 aq_691 - tRNA (uracil-5-)-methyltransferase Gid 489 41.56 0 470797..471501 + 234 15606097 kpsU aq_692 - 3-deoxy-manno-octulosonate cytidylyltransferase 490 42.17 0 471539..472783 - 414 15606098 - aq_693 - hypothetical protein 491 47.65 +1 472894..476142 - 1082 15606099 acrD1 aq_695 - AcrB/AcrD/AcrF family cation efflux protein 492 46.13 0 476147..477271 - 374 15606100 acrE aq_698 - acriflavin resistance protein AcrE 493 44.37 0 477268..478581 - 437 15606101 - aq_699 - hypothetical protein 494 44.44 0 478635..479876 - 413 15606102 - aq_701 - hypothetical protein 495 43.80 0 479863..480273 - 136 15606103 merR aq_702 - MerR family transcriptional regulator 496 47.75 +1 480279..481409 - 376 15606104 dnaJ2 aq_703 - chaperone DnaJ 497 46.30 0 481480..482343 - 287 15606105 truB aq_705 - tRNA pseudouridine 55 synthase 498 49.92 +1 482374..483567 + 397 15606106 trpB1 aq_706 - tryptophan synthase subunit beta 499 46.99 0 483583..484644 + 353 15606107 - aq_707 - hypothetical protein 500 46.39 0 484648..486630 + 660 15606108 hyuA aq_708 - N-methylhydantoinase A 501 42.39 0 486617..487135 - 172 15606109 nucI aq_710 - thermococcal nuclease-like protein 502 34.88 -2 487132..487647 - 171 15606110 - aq_711 - hypothetical protein 503 43.96 0 487644..488198 - 184 15606111 frr aq_712 - ribosome recycling factor 504 47.86 +1 488204..488926 - 240 15606112 pyrH aq_713 - UMP kinase 505 45.59 0 488926..489798 - 290 15606113 tsf aq_715 - elongation factor Ts 506 39.64 -1 489875..491269 - 464 15606114 - aq_716 - hypothetical protein 507 42.62 0 491380..493458 + 692 15606115 glgP aq_717 - glycogen phosphorylase 508 43.19 0 493455..495950 + 831 15606116 mpg aq_718 - mannose-1-phosphate guanyltransferase 509 42.12 0 495947..497380 + 477 15606117 - aq_720 - hypothetical protein 510 42.60 0 497377..498768 + 463 15606118 glgA aq_721 - glycogen synthase 511 46.38 0 498743..500635 + 630 15606119 glgB aq_722 - glycogen branching enzyme 512 42.04 0 500632..502089 + 485 15606120 malM aq_723 - 4-alpha-glucanotransferase (amylomaltase) 513 41.35 0 502101..504608 + 835 15606121 ctrA1 aq_724 - cation transporter E1-E2 family ATPase 514 40.40 0 504614..505618 + 334 15606122 ldhA aq_727 - D-lactate dehydrogenase 515 44.50 0 505654..506826 + 390 15606123 speC aq_728 - ornithine decarboxylase 516 44.38 0 506732..507745 + 337 15606124 - aq_729 - hypothetical protein 517 45.08 0 507757..508590 + 277 15606125 ccdA aq_731 - cytochrome c-type biogenesis protein 518 44.71 0 508590..509213 + 207 15606126 hisH aq_732 - amidotransferase HisH 519 50.93 +2 509203..509685 - 160 15606127 rpsG2 aq_734 - 30S ribosomal protein S7 520 47.80 +1 509689..510075 - 128 15606128 rpsL aq_735 - 30S ribosomal protein S12 521 48.28 +1 510161..511558 + 465 15606129 lpdA aq_736 - dihydrolipoamide dehydrogenase 522 47.49 +1 511622..512716 + 364 15606130 - aq_737 - hypothetical protein 523 47.91 +1 512737..513957 + 406 15606131 nifS2 aq_739 - FeS cluster formation protein NifS 524 39.45 -1 513969..515030 + 353 15606132 - aq_740 - hypothetical protein 43.45 MEAN 3.70 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0