version 1.0
Aquifex aeolicus VF5, complete genome - 1..1551335 1529 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 165 44.53 0 132582..134582 + 666 15605773 narB aq_217 - nitrate reductase narB 166 41.29 0 134585..136105 - 506 15605774 nifA aq_218 - NifA family transcriptional regulator 167 49.67 +1 136122..136574 - 150 15605775 dut aq_220 - deoxyuridine 5'triphosphate nucleotidohydrolase 168 48.15 +1 136567..138894 - 775 15605776 phpA aq_221 - polynucleotide phosphorylase/polyadenylase 169 42.12 0 138897..139169 - 90 15605777 rpsO aq_226a - ribosomal protein S15 170 47.06 0 139228..141390 - 720 15605778 aldH2 aq_227 - aldehyde dehydrogenase 171 42.09 0 141804..143150 + 448 15605779 ntrC3 aq_230 - NtrC family transcriptional regulator 172 43.14 0 143094..144113 - 339 15605780 hksP4 aq_231 - histidine kinase sensor protein 173 46.76 0 144275..145585 + 436 15605781 dhsU aq_232 - flavocytochrome C sulfide dehydrogenase 174 45.33 0 145595..146311 + 238 15605782 soxF aq_234 - Rieske-I iron sulfur protein 175 45.30 0 146292..147545 + 417 15605783 fccB' aq_235 - sulfide dehydrogenase, flavoprotein subunit 176 48.21 +1 147546..149078 - 510 15605784 guaA aq_236 - bifunctional GMP synthase/glutamine amidotransferase protein 177 45.35 0 149124..149639 + 171 15605785 sodC2 aq_238 - superoxide dismutase (Cu/Zn) 178 45.23 0 149720..150274 + 184 15605786 folE aq_239 - GTP cyclohydrolase I 179 46.62 0 150271..151173 - 300 15605787 - aq_240 - hypothetical protein 180 47.45 +1 151206..153593 + 795 15605788 lon aq_242 - Lon protease 181 42.88 0 153580..155067 - 495 15605789 - aq_243 - hypothetical protein 182 45.11 0 155054..156148 - 364 15605790 leuB aq_244 - 3-isopropylmalate dehydrogenase 183 41.53 0 156794..157891 + 365 15605791 purK aq_245 - phosphoribosylaminoimidazole carboxylase ATPase subunit 184 43.33 0 157857..158696 - 279 15605792 - aq_246 - hypothetical protein 185 46.83 0 158696..160132 - 478 15605793 gatA aq_247 - glutamyl-tRNA (Gln) amidotransferase subunit A 186 45.89 0 160145..160582 - 145 15605794 - aq_250 - hypothetical protein 187 43.17 0 160629..161309 - 226 15605795 - aq_251 - N-glycosylase/DNA lyase 188 44.29 0 161325..161744 - 139 15605796 - aq_252 - hypothetical protein 189 44.44 0 161732..162217 - 161 15605797 kdtB aq_253 - lipopolysaccharide core biosynthesis protein 190 49.75 +1 162752..163159 + 135 15605798 - aq_254 - S-adenosylmethionine decarboxylase proenzyme 191 35.19 -2 163193..163678 + 161 15605799 - aq_255 - hypothetical protein 192 42.80 0 164100..165377 - 425 15605800 ygcA aq_257 - RNA methyltransferase 193 43.59 0 165358..166371 - 337 15605801 nusA aq_259 - transcription elongation factor NusA 194 42.14 0 166365..166841 - 158 15605802 - aq_260 - hypothetical protein 195 43.68 0 167586..168155 - 189 15605803 - aq_262 - hypothetical protein 196 44.44 0 168918..169889 + 323 15605804 hemC aq_263 - porphobilinogen deaminase 197 36.24 -1 169886..170539 + 217 15605805 - aq_264 - hypothetical protein 198 38.94 -1 170475..171491 - 338 15605806 - aq_265 - hypothetical protein 199 41.86 0 171596..172732 + 378 15605807 - aq_267 - hypothetical protein 200 42.25 0 172848..173318 + 156 15605808 - aq_268 - hypothetical protein 201 43.76 0 173338..173826 - 162 15605809 - aq_269 - hypothetical protein 202 46.15 0 173860..174678 + 272 15605810 lgt aq_270 - prolipoprotein diacylglyceryl transferase 203 44.22 0 174675..175886 + 403 15605811 - aq_271 - hypothetical protein 204 37.78 -1 175879..176328 - 149 15605812 - aq_272 - hypothetical protein 205 46.48 0 176409..177572 + 387 15605813 aspC4 aq_273 - aspartate aminotransferase 206 46.00 0 177613..178299 + 228 15605814 - aq_274 - hypothetical protein 207 45.53 0 178587..179963 - 458 15605815 - aq_276 - hypothetical protein 208 44.40 0 179960..181378 - 472 15605816 - aq_277 - hypothetical protein 209 47.71 +1 181375..183210 - 611 15605817 - aq_278 - hypothetical protein 210 41.11 0 183235..183774 - 179 15605818 acrR3 aq_281 - TetR/AcrR family transcriptional regulator 211 42.21 0 183890..184531 + 213 15605819 mutY1 aq_282 - endonuclease III 212 44.38 0 184528..185025 - 165 15605820 - aq_283 - hypothetical protein 213 44.67 0 185022..186344 - 440 15605821 - aq_284 - hypothetical protein 214 39.20 -1 186373..186900 - 175 15605822 - aq_286 - hypothetical protein 215 42.41 0 186900..187373 - 157 15605823 smpB aq_287 - SsrA-binding protein 216 44.99 0 187381..188349 - 322 15605824 - aq_288 - hypothetical protein 217 45.98 0 188378..189856 + 492 15605825 - aq_291 - hypothetical protein 218 36.62 -1 189867..190262 + 131 15605826 - aq_293 - hypothetical protein 219 39.78 0 190268..191383 + 371 15605827 - aq_294 - hypothetical protein 220 42.69 0 191380..192630 + 416 15605828 - aq_296 - hypothetical protein 221 46.22 0 192623..193297 + 224 15605829 abcT8 aq_297 - ABC transporter 222 46.48 0 193284..194561 - 425 15605830 serS aq_298 - seryl-tRNA synthetase 223 47.22 +1 194591..196369 + 592 15605831 glmS aq_301 - glucosamine-fructose-6-phosphate aminotransferase 224 46.67 0 196370..196714 - 114 15605832 - aq_302 - hypothetical protein 225 42.01 0 196711..197817 - 368 15605833 - aq_303 - hypothetical protein 226 47.06 0 197804..200674 - 956 15605834 ileS aq_305 - isoleucyl-tRNA synthetase 227 44.30 0 200713..203292 + 859 15605835 mutS1 aq_308 - DNA mismatch repair protein 228 43.51 0 204008..204754 - 248 15605836 - aq_311 - hypothetical protein 229 45.83 0 204741..205580 - 279 15605837 - aq_313 - hypothetical protein 230 40.87 0 205589..206026 - 145 15605838 - aq_314 - hypothetical protein 231 41.05 0 206135..207067 - 310 15605839 hksP2 aq_316 - histidine kinase sensor protein 232 42.94 0 207352..208038 + 228 15605840 phoB aq_319 - transcriptional regulator (PhoB-like) 233 40.87 0 208049..208645 + 198 15605841 - aq_321 - hypothetical protein 234 41.75 0 208642..209841 - 399 15605842 dnaA aq_322 - chromosome replication initiator protein DnaA 235 45.00 0 209932..210942 - 336 15605843 - aq_323 - hypothetical protein 236 44.57 0 211034..211816 + 260 15605844 - aq_324 - hypothetical protein 237 44.18 0 211813..212577 - 254 15605845 murI aq_325 - glutamate racemase 238 37.29 -1 212605..213666 + 353 15605846 kdtA aq_326 - 3-deoxy-D-manno-2-octulosonic acid transferase 239 46.56 0 213641..214411 - 256 15605847 - aq_327 - hypothetical protein 240 44.38 0 214370..214885 + 171 15605848 - aq_328 - hypothetical protein 241 42.63 0 214915..215796 + 293 15605849 - aq_331 - hypothetical protein 242 44.64 0 215954..216970 + 338 15605850 dcuP aq_334 - uroporphyrinogen decarboxylase 243 45.52 0 217169..217759 - 196 15605851 - aq_336 - hypothetical protein 244 44.49 0 217910..218716 - 268 15605852 cysQ aq_337 - CysQ protein 245 42.05 0 218720..219373 - 217 15605853 - aq_338 - hypothetical protein 246 31.68 -2 219402..221159 + 585 15605854 - aq_340 - hypothetical protein 247 38.21 -1 222065..222556 + 163 15605855 - aq_341 - hypothetical protein 248 42.51 0 222567..223340 + 257 15605856 - aq_342 - hypothetical protein 249 39.89 0 223332..224231 - 299 15605857 arsA2 aq_343 - anion transporting ATPase 250 42.23 0 224228..225160 - 310 15605858 rfaD aq_344 - ADP-L-glycero-D-manno-heptose-6-epimerase 251 43.08 0 225588..227465 + 625 15605859 - aq_345 - hypothetical protein 252 44.91 0 227462..228040 - 192 15605860 pth aq_346 - peptidyl-tRNA hydrolase 253 48.25 +1 228045..228500 - 151 15605861 ctc aq_348 - general stress protein Ctc 254 48.32 +1 228716..229936 + 406 15605862 ribA aq_350 - GTP cyclohydrolase II 255 48.50 +1 229933..231837 - 634 15605863 leuS aq_351 - leucyl-tRNA synthetase alpha subunit 256 47.43 +1 231841..232578 - 245 15605864 - aq_355 - hypothetical protein 257 46.38 0 232592..234178 - 528 15605865 leuA1 aq_356 - alpha-isopropylmalate/homocitrate synthase family transferase 258 38.95 -1 234260..234526 + 88 15605866 flgM aq_357a - anti sigma factor FlgM 259 42.46 0 234590..236518 + 642 15605867 dinG aq_358 - ATP-dependent helicase DinG 260 37.72 -1 236530..237600 + 356 15605868 - aq_359 - hypothetical protein 261 45.56 0 237559..238302 - 247 15605869 timA aq_360 - triose phophate isomerase 262 43.36 0 238638..239435 - 265 15605870 - aq_362 - hypothetical protein 263 43.06 0 239435..239866 - 143 15605871 - aq_363 - hypothetical protein 264 40.74 0 239863..240240 - 125 15605872 - aq_364 - hypothetical protein 43.45 MEAN 3.70 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.