IslandPath Analysis: Anaeromyxobacter sp. Fw109-5



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 73.23   STD DEV: 3.77
Anaeromyxobacter sp. Fw109-5, complete genome - 1..5277990
4466 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
830	 72.30	0	953051..953902	-	283	153003709	-	Anae109_0839	-	ECF subfamily RNA polymerase sigma-24 factor
831	 67.43	-1	954195..954845	+	216	153003710	-	Anae109_0840	-	hypothetical protein
832	 74.80	0	954833..957856	+	1007	153003711	-	Anae109_0841	-	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
833	 67.91	-1	957853..959301	+	482	153003712	-	Anae109_0842	-	polysulphide reductase NrfD
834	 72.16	0	959298..959825	+	175	153003713	-	Anae109_0843	-	transmembrane prediction
835	 74.52	0	959827..960399	+	190	153003714	-	Anae109_0844	-	hypothetical protein
836	 69.11	-1	960396..961580	+	394	153003715	-	Anae109_0845	-	hypothetical protein
837	 75.68	0	961577..962020	+	147	153003716	-	Anae109_0846	-	hypothetical protein
838	 72.77	0	962017..962868	+	283	153003717	-	Anae109_0847	-	SCO1/SenC family protein
839	 69.32	-1	962865..963920	+	351	153003718	-	Anae109_0848	-	cytochrome c oxidase subunit II
840	 65.71	-1	963895..965562	+	555	153003719	-	Anae109_0849	-	cytochrome c oxidase subunit I type
841	 68.08	-1	965552..966187	+	211	153003720	-	Anae109_0850	-	cytochrome c oxidase subunit III
842	 71.64	0	966201..966602	+	133	153003721	-	Anae109_0851	-	caa(3)-type oxidase, subunit IV
843	 75.48	0	966908..968302	+	464	153003722	-	Anae109_0852	-	two component, sigma54 specific, Fis family transcriptional regulator
844	 74.24	0	968415..969074	+	219	153003723	-	Anae109_0853	-	hypothetical protein
845	 70.34	0	969569..974191	+	1540	153003724	-	Anae109_0854	-	glutamate synthase (ferredoxin)
846	 71.51	0	974255..975742	+	495	153003725	-	Anae109_0855	-	glutamate synthase, NADH/NADPH, small subunit
847	 80.85	+2	975739..976605	-	288	153003726	-	Anae109_0856	-	hypothetical protein
848	 76.13	0	976611..979517	-	968	153003727	-	Anae109_0857	-	hypothetical protein
849	 72.99	0	979566..980894	-	442	153003728	-	Anae109_0858	-	major facilitator transporter
850	 75.09	0	980916..981971	-	351	153003729	-	Anae109_0859	-	molybdenum cofactor biosynthesis protein A
851	 78.38	+1	981955..983124	-	389	153003730	-	Anae109_0860	-	polysulphide reductase NrfD
852	 73.23	0	983124..984053	-	309	153003731	-	Anae109_0861	-	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
853	 71.81	0	984056..986641	-	861	153003732	-	Anae109_0862	-	molydopterin dinucleotide-binding region
854	 71.60	0	986750..987337	-	195	153003733	-	Anae109_0863	-	molybdopterin oxidoreductase Fe4S4 region
855	 76.89	0	987517..989628	+	703	153003734	-	Anae109_0864	-	superfamily I DNA/RNA helicase-like protein
856	 68.45	-1	989800..990303	+	167	153003735	-	Anae109_0865	-	redoxin domain-containing protein
857	 72.75	0	990366..991367	-	333	153003736	-	Anae109_0866	-	cupin 2 domain-containing protein
858	 77.45	+1	993816..994928	-	370	153003737	-	Anae109_0869	-	putative lipoprotein
859	 73.71	0	994937..997534	-	865	153003738	-	Anae109_0870	-	TonB family protein
860	 80.70	+1	997540..998280	-	246	153003739	-	Anae109_0871	-	TonB family protein
861	 71.60	0	998277..998702	-	141	153003740	-	Anae109_0872	-	biopolymer transport protein ExbD/TolR
862	 76.90	0	998730..999452	-	240	153003741	-	Anae109_0873	-	MotA/TolQ/ExbB proton channel
863	 77.38	+1	999702..1000784	+	360	153003742	-	Anae109_0874	-	ICE-like protease
864	 75.00	0	1000866..1001369	+	167	153003743	-	Anae109_0875	-	ECF subfamily RNA polymerase sigma-24 factor
865	 79.12	+1	1001366..1002136	+	256	153003744	-	Anae109_0876	-	hypothetical protein
866	 75.60	0	1002193..1004319	+	708	153003745	-	Anae109_0877	-	peptidase C14 caspase catalytic subunit p20
867	 74.05	0	1004330..1006414	-	694	153003746	-	Anae109_0878	-	ABC transporter related
868	 75.34	0	1006553..1006990	+	145	153003747	-	Anae109_0879	-	hypothetical protein
869	 76.45	0	1007071..1007775	+	234	153003748	-	Anae109_0880	-	two component transcriptional regulator
870	 77.68	+1	1007772..1009133	+	453	153003749	-	Anae109_0881	-	integral membrane sensor signal transduction histidine kinase
871	 75.36	0	1009186..1009392	-	68	153003750	-	Anae109_0882	-	hypothetical protein
872	 75.81	0	1009483..1010127	+	214	153003751	-	Anae109_0883	-	hypothetical protein
873	 74.65	0	1010155..1010868	+	237	153003752	-	Anae109_0884	-	TetR family transcriptional regulator
874	 76.14	0	1010832..1011749	-	305	153003753	-	Anae109_0885	-	short-chain dehydrogenase/reductase SDR
875	 75.54	0	1011801..1012262	-	153	153003754	-	Anae109_0886	-	hypothetical protein
876	 71.75	0	1012280..1013911	-	543	153003755	-	Anae109_0887	-	delta-1-pyrroline-5-carboxylate dehydrogenase
877	 78.14	+1	1014032..1014667	-	211	153003756	-	Anae109_0888	-	hypothetical protein
878	 76.06	0	1014753..1016126	-	457	153003757	-	Anae109_0889	-	two component, sigma54 specific, Fis family transcriptional regulator
879	 75.74	0	1016123..1017499	-	458	153003758	-	Anae109_0890	-	integral membrane sensor signal transduction histidine kinase
880	 78.45	+1	1017510..1019036	-	508	153003759	-	Anae109_0891	-	outer membrane efflux protein
881	 77.11	+1	1019307..1020350	+	347	153003760	-	Anae109_0892	-	secretion protein HlyD family protein
882	 77.25	+1	1020347..1021300	+	317	153003761	-	Anae109_0893	-	ABC transporter related
883	 75.56	0	1021297..1022241	+	314	153003762	-	Anae109_0894	-	ABC transporter related
884	 72.47	0	1022238..1023374	+	378	153003763	-	Anae109_0895	-	ABC-2 type transporter
885	 73.37	0	1023371..1024519	+	382	153003764	-	Anae109_0896	-	ABC-2 type transporter
886	 73.55	0	1024590..1025519	+	309	153003765	-	Anae109_0897	-	ABC transporter related
887	 69.82	0	1025516..1026277	+	253	153003766	-	Anae109_0898	-	ABC-2 type transporter
888	 72.07	0	1026509..1027360	+	283	153003767	-	Anae109_0899	-	hypothetical protein
889	 75.96	0	1027480..1029297	+	605	153003768	-	Anae109_0900	-	ATP-dependent DNA helicase RecQ
890	 74.50	0	1029302..1029850	+	182	153003769	-	Anae109_0901	-	hypothetical protein
891	 73.50	0	1029976..1030443	+	155	153003770	-	Anae109_0902	-	BadM/Rrf2 family transcriptional regulator
892	 66.18	-1	1030440..1031879	+	479	153003771	-	Anae109_0903	-	cysteine desulfurase activator complex subunit SufB
893	 71.92	0	1031882..1032700	+	272	153003772	-	Anae109_0904	-	FeS assembly ATPase SufC
894	 76.41	0	1032709..1034022	+	437	153003773	-	Anae109_0905	-	FeS assembly protein SufD
895	 73.87	0	1034019..1035296	+	425	153003774	-	Anae109_0906	-	SufS subfamily cysteine desulfurase
896	 74.00	0	1035322..1035771	+	149	153003775	-	Anae109_0907	-	NifU family SUF system FeS assembly protein
897	 73.76	0	1035775..1036338	+	187	153003776	-	Anae109_0908	-	hypothetical protein
898	 71.63	0	1036346..1036708	-	120	153003777	-	Anae109_0909	-	FHA domain-containing protein
899	 70.23	0	1036891..1037787	+	298	153003778	-	Anae109_0910	-	hypothetical protein
900	 79.67	+1	1037879..1039777	-	632	153003779	-	Anae109_0911	-	PDZ/DHR/GLGF domain-containing protein
901	 77.19	+1	1039915..1040826	-	303	153003780	-	Anae109_0912	-	peptidase S1 and S6 chymotrypsin/Hap
902	 77.74	+1	1040823..1041734	-	303	153003781	-	Anae109_0913	-	peptidase S1 and S6 chymotrypsin/Hap
903	 76.54	0	1041783..1042319	-	178	153003782	-	Anae109_0914	-	hypothetical protein
904	 78.49	+1	1042541..1043149	+	202	153003783	-	Anae109_0915	-	two component LuxR family transcriptional regulator
905	 76.30	0	1043255..1043773	+	172	153003784	-	Anae109_0916	-	pyridoxamine 5'-phosphate oxidase-related FMN-binding
906	 77.94	+1	1043834..1044232	-	132	153003785	-	Anae109_0917	-	translation initiation factor SUI1
907	 81.15	+2	1044157..1045392	-	411	153003786	-	Anae109_0918	-	TfuA domain-containing protein
908	 80.18	+1	1045389..1046528	-	379	153003787	-	Anae109_0919	-	hypothetical protein
909	 72.72	0	1046593..1047996	+	467	153003788	-	Anae109_0920	-	peptidase M20
910	 69.76	0	1048185..1050704	+	839	153003789	-	Anae109_0921	-	glycogen/starch/alpha-glucan phosphorylase
911	 75.24	0	1050610..1051029	-	139	153003790	-	Anae109_0922	-	methylated-DNA-(protein)-cysteine S-methyltransferase DNA binding
912	 75.26	0	1051093..1051674	+	193	153003791	-	Anae109_0923	-	hypothetical protein
913	 69.42	-1	1051749..1052330	+	193	153003792	-	Anae109_0924	-	LemA family protein
914	 78.04	+1	1052341..1053096	+	251	153003793	-	Anae109_0925	-	hypothetical protein
915	 74.96	0	1053105..1053743	+	212	153003794	-	Anae109_0926	-	hypothetical protein
916	 73.56	0	1053773..1055251	-	492	153003795	-	Anae109_0927	-	sodium/hydrogen exchanger
917	 78.09	+1	1055326..1056393	-	355	153003796	-	Anae109_0928	-	radical SAM domain-containing protein
918	 73.19	0	1056425..1057099	+	224	153003797	-	Anae109_0929	-	XRE family transcriptional regulator
919	 76.29	0	1057202..1058572	+	456	153003798	-	Anae109_0930	-	response regulator receiver protein
920	 73.63	0	1058904..1059104	+	66	153003799	-	Anae109_0931	-	hypothetical protein
921	 75.88	0	1059196..1060335	+	379	153003800	-	Anae109_0932	-	hypothetical protein
922	 67.83	-1	1060477..1060992	+	171	153003801	-	Anae109_0933	-	OmpA/MotB domain-containing protein
923	 76.43	0	1061135..1061554	+	139	153003802	-	Anae109_0934	-	hypothetical protein
924	 69.46	-1	1061585..1062586	+	333	153003803	-	Anae109_0935	-	band 7 protein
925	 76.25	0	1062699..1063397	+	232	153003804	-	Anae109_0936	-	hypothetical protein
926	 78.10	+1	1063550..1064389	-	279	153003805	-	Anae109_0937	-	TPR repeat-containing protein
927	 71.81	0	1064402..1065295	-	297	153003806	-	Anae109_0938	-	Ku family containing protein
928	 76.38	0	1065326..1067869	+	847	153003807	-	Anae109_0939	-	DNA ligase D
929	 72.07	0	1068020..1068352	+	110	153003808	-	Anae109_0940	-	hypothetical protein
73.23	MEAN

3.77	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.