IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter sp. Fw109-5



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 73.23 STD DEV: 3.77
Anaeromyxobacter sp. Fw109-5, complete genome - 1..5277990
4466 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
786	 73.89	0	903389..903859	-	156	153003665	-	Anae109_0795	-	YbaK/prolyl-tRNA synthetase associated region
787	 78.05	+1	904090..904704	+	204	153003666	-	Anae109_0796	-	hypothetical protein
788	 77.59	+1	904821..905525	+	234	153003667	-	Anae109_0797	-	radical SAM domain-containing protein
789	 73.39	0	905509..906579	-	356	153003668	-	Anae109_0798	-	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
790	 69.80	0	906762..907622	+	286	153003669	-	Anae109_0799	-	anti-sigma-factor antagonist
791	 68.82	-1	907633..908004	+	123	153003670	-	Anae109_0800	-	anti-sigma-factor antagonist
792	 71.11	0	908012..908416	+	134	153003671	-	Anae109_0801	-	putative anti-sigma regulatory factor, serine/threonine protein kinase
793	 78.17	+1	908407..909414	+	335	153003672	-	Anae109_0802	-	putative anti-sigma regulatory factor, serine/threonine protein kinase
794	 72.79	0	909411..911567	+	718	153003673	-	Anae109_0803	-	histidine kinase
795	 76.15	0	911564..913555	+	663	153003674	-	Anae109_0804	-	multi-sensor signal transduction histidine kinase
796	 74.02	0	913567..914463	-	298	153003675	-	Anae109_0805	-	transporter DMT superfamily protein
797	 75.66	0	914528..914983	+	151	153003676	-	Anae109_0806	-	UspA domain-containing protein
798	 73.25	0	914958..915458	-	166	153003677	-	Anae109_0807	-	cyclase/dehydrase
799	 72.34	0	915555..916541	+	328	153003678	-	Anae109_0808	-	dihydroorotate dehydrogenase 2
800	 82.42	+2	916566..917219	+	217	153003679	-	Anae109_0809	-	diacylglycerol kinase
801	 73.95	0	917229..917489	-	86	153003680	-	Anae109_0810	-	hypothetical protein
802	 67.14	-1	917644..918063	+	139	153003681	-	Anae109_0811	-	rubrerythrin
803	 70.55	0	918160..919524	+	454	153003682	-	Anae109_0812	-	hypothetical protein
804	 73.44	0	919521..920081	+	186	153003683	-	Anae109_0813	-	hypothetical protein
805	 74.46	0	920360..920962	-	200	153003684	-	Anae109_0814	-	exonuclease RNase T and DNA polymerase III
806	 70.18	0	921131..921700	+	189	153003685	-	Anae109_0815	-	PfpI family intracellular peptidase
807	 71.35	0	922159..923226	-	355	153003686	-	Anae109_0816	-	HNH endonuclease
808	 73.45	0	923764..925575	-	603	153003687	-	Anae109_0817	-	CBS domain-containing protein
809	 73.30	0	925730..926347	+	205	153003688	-	Anae109_0818	-	hypothetical protein
810	 79.46	+1	926290..926844	-	184	153003689	-	Anae109_0819	-	adenylylsulfate kinase
811	 77.37	+1	926841..927980	-	379	153003690	-	Anae109_0820	-	hypothetical protein
812	 72.43	0	928148..928945	+	265	153003691	-	Anae109_0821	-	prolipoprotein diacylglyceryl transferase
813	 79.14	+1	928960..930867	+	635	153003692	-	Anae109_0822	-	heat shock protein DnaJ-like protein
814	 72.80	0	930872..931360	+	162	153003693	-	Anae109_0823	-	hypothetical protein
815	 69.47	0	931456..931848	+	130	153003694	-	Anae109_0824	-	response regulator receiver protein
816	 78.35	+1	931854..932897	+	347	153003695	-	Anae109_0825	-	NAD-dependent epimerase/dehydratase
817	 74.67	0	932905..934029	-	374	153003696	-	Anae109_0826	-	CBS domain-containing protein
818	 76.20	0	934385..935527	+	380	153003697	-	Anae109_0827	-	hypothetical protein
819	 80.00	+1	935503..936747	-	414	153003698	-	Anae109_0828	-	methyltransferase small
820	 72.72	0	936794..939616	+	940	153003699	-	Anae109_0829	-	alpha-ketoglutarate decarboxylase
821	 74.66	0	939621..940934	+	437	153003700	-	Anae109_0830	-	2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase
822	 73.07	0	940988..941737	-	249	153003701	-	Anae109_0831	-	hypothetical protein
823	 75.29	0	941763..943733	-	656	153003702	-	Anae109_0832	-	DNA ligase D
824	 78.49	+1	943755..946520	-	921	153003703	-	Anae109_0833	-	ATP-dependent helicase HrpB
825	 75.60	0	946610..948478	+	622	153003704	-	Anae109_0834	-	methyl-accepting chemotaxis sensory transducer
826	 70.11	0	948668..950959	-	763	153003705	-	Anae109_0835	-	ATP-dependent Clp protease, ATP-binding subunit clpA
827	 67.28	-1	950962..951288	-	108	153003706	-	Anae109_0836	-	ATP-dependent Clp protease adaptor protein ClpS
828	 75.28	0	951537..952244	-	235	153003707	-	Anae109_0837	-	leucyl/phenylalanyl-tRNA--protein transferase
829	 75.40	0	952325..952942	-	205	153003708	-	Anae109_0838	-	hypothetical protein
830	 72.30	0	953051..953902	-	283	153003709	-	Anae109_0839	-	ECF subfamily RNA polymerase sigma-24 factor
831	 67.43	-1	954195..954845	+	216	153003710	-	Anae109_0840	-	hypothetical protein
832	 74.80	0	954833..957856	+	1007	153003711	-	Anae109_0841	-	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
833	 67.91	-1	957853..959301	+	482	153003712	-	Anae109_0842	-	polysulphide reductase NrfD
834	 72.16	0	959298..959825	+	175	153003713	-	Anae109_0843	-	transmembrane prediction
835	 74.52	0	959827..960399	+	190	153003714	-	Anae109_0844	-	hypothetical protein
836	 69.11	-1	960396..961580	+	394	153003715	-	Anae109_0845	-	hypothetical protein
837	 75.68	0	961577..962020	+	147	153003716	-	Anae109_0846	-	hypothetical protein
838	 72.77	0	962017..962868	+	283	153003717	-	Anae109_0847	-	SCO1/SenC family protein
839	 69.32	-1	962865..963920	+	351	153003718	-	Anae109_0848	-	cytochrome c oxidase subunit II
840	 65.71	-1	963895..965562	+	555	153003719	-	Anae109_0849	-	cytochrome c oxidase subunit I type
841	 68.08	-1	965552..966187	+	211	153003720	-	Anae109_0850	-	cytochrome c oxidase subunit III
842	 71.64	0	966201..966602	+	133	153003721	-	Anae109_0851	-	caa(3)-type oxidase, subunit IV
843	 75.48	0	966908..968302	+	464	153003722	-	Anae109_0852	-	two component, sigma54 specific, Fis family transcriptional regulator
844	 74.24	0	968415..969074	+	219	153003723	-	Anae109_0853	-	hypothetical protein
845	 70.34	0	969569..974191	+	1540	153003724	-	Anae109_0854	-	glutamate synthase (ferredoxin)
846	 71.51	0	974255..975742	+	495	153003725	-	Anae109_0855	-	glutamate synthase, NADH/NADPH, small subunit
847	 80.85	+2	975739..976605	-	288	153003726	-	Anae109_0856	-	hypothetical protein
848	 76.13	0	976611..979517	-	968	153003727	-	Anae109_0857	-	hypothetical protein
849	 72.99	0	979566..980894	-	442	153003728	-	Anae109_0858	-	major facilitator transporter
850	 75.09	0	980916..981971	-	351	153003729	-	Anae109_0859	-	molybdenum cofactor biosynthesis protein A
851	 78.38	+1	981955..983124	-	389	153003730	-	Anae109_0860	-	polysulphide reductase NrfD
852	 73.23	0	983124..984053	-	309	153003731	-	Anae109_0861	-	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
853	 71.81	0	984056..986641	-	861	153003732	-	Anae109_0862	-	molydopterin dinucleotide-binding region
854	 71.60	0	986750..987337	-	195	153003733	-	Anae109_0863	-	molybdopterin oxidoreductase Fe4S4 region
855	 76.89	0	987517..989628	+	703	153003734	-	Anae109_0864	-	superfamily I DNA/RNA helicase-like protein
856	 68.45	-1	989800..990303	+	167	153003735	-	Anae109_0865	-	redoxin domain-containing protein
857	 72.75	0	990366..991367	-	333	153003736	-	Anae109_0866	-	cupin 2 domain-containing protein
858	 77.45	+1	993816..994928	-	370	153003737	-	Anae109_0869	-	putative lipoprotein
859	 73.71	0	994937..997534	-	865	153003738	-	Anae109_0870	-	TonB family protein
860	 80.70	+1	997540..998280	-	246	153003739	-	Anae109_0871	-	TonB family protein
861	 71.60	0	998277..998702	-	141	153003740	-	Anae109_0872	-	biopolymer transport protein ExbD/TolR
862	 76.90	0	998730..999452	-	240	153003741	-	Anae109_0873	-	MotA/TolQ/ExbB proton channel
863	 77.38	+1	999702..1000784	+	360	153003742	-	Anae109_0874	-	ICE-like protease
864	 75.00	0	1000866..1001369	+	167	153003743	-	Anae109_0875	-	ECF subfamily RNA polymerase sigma-24 factor
865	 79.12	+1	1001366..1002136	+	256	153003744	-	Anae109_0876	-	hypothetical protein
866	 75.60	0	1002193..1004319	+	708	153003745	-	Anae109_0877	-	peptidase C14 caspase catalytic subunit p20
867	 74.05	0	1004330..1006414	-	694	153003746	-	Anae109_0878	-	ABC transporter related
868	 75.34	0	1006553..1006990	+	145	153003747	-	Anae109_0879	-	hypothetical protein
869	 76.45	0	1007071..1007775	+	234	153003748	-	Anae109_0880	-	two component transcriptional regulator
870	 77.68	+1	1007772..1009133	+	453	153003749	-	Anae109_0881	-	integral membrane sensor signal transduction histidine kinase
871	 75.36	0	1009186..1009392	-	68	153003750	-	Anae109_0882	-	hypothetical protein
872	 75.81	0	1009483..1010127	+	214	153003751	-	Anae109_0883	-	hypothetical protein
873	 74.65	0	1010155..1010868	+	237	153003752	-	Anae109_0884	-	TetR family transcriptional regulator
874	 76.14	0	1010832..1011749	-	305	153003753	-	Anae109_0885	-	short-chain dehydrogenase/reductase SDR
875	 75.54	0	1011801..1012262	-	153	153003754	-	Anae109_0886	-	hypothetical protein
876	 71.75	0	1012280..1013911	-	543	153003755	-	Anae109_0887	-	delta-1-pyrroline-5-carboxylate dehydrogenase
877	 78.14	+1	1014032..1014667	-	211	153003756	-	Anae109_0888	-	hypothetical protein
878	 76.06	0	1014753..1016126	-	457	153003757	-	Anae109_0889	-	two component, sigma54 specific, Fis family transcriptional regulator
879	 75.74	0	1016123..1017499	-	458	153003758	-	Anae109_0890	-	integral membrane sensor signal transduction histidine kinase
880	 78.45	+1	1017510..1019036	-	508	153003759	-	Anae109_0891	-	outer membrane efflux protein
881	 77.11	+1	1019307..1020350	+	347	153003760	-	Anae109_0892	-	secretion protein HlyD family protein
882	 77.25	+1	1020347..1021300	+	317	153003761	-	Anae109_0893	-	ABC transporter related
883	 75.56	0	1021297..1022241	+	314	153003762	-	Anae109_0894	-	ABC transporter related
884	 72.47	0	1022238..1023374	+	378	153003763	-	Anae109_0895	-	ABC-2 type transporter
885	 73.37	0	1023371..1024519	+	382	153003764	-	Anae109_0896	-	ABC-2 type transporter
73.23	MEAN

3.77	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.