IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter sp. Fw109-5



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 73.23 STD DEV: 3.77
Anaeromyxobacter sp. Fw109-5, complete genome - 1..5277990
4466 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
741	 78.33	+1	850967..851686	-	239	153003620	-	Anae109_0748	-	secretory protein YscJ/FliF family protein
742	 78.53	+1	851699..852052	-	117	153003621	-	Anae109_0749	-	hypothetical protein
743	 71.67	0	852060..852479	-	139	153003622	-	Anae109_0750	-	hypothetical protein
744	 71.77	0	852640..853953	+	437	153003623	-	Anae109_0751	-	hypothetical protein
745	 75.27	0	854047..855162	-	371	153003624	-	Anae109_0752	-	hypothetical protein
746	 77.50	+1	855336..856757	+	473	153003625	-	Anae109_0753	-	histidinol dehydrogenase
747	 72.01	0	856754..857371	+	205	153003626	-	Anae109_0754	-	imidazoleglycerol-phosphate dehydratase
748	 74.96	0	857430..858044	+	204	153003627	-	Anae109_0755	-	imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
749	 75.59	0	858053..858769	+	238	153003628	-	Anae109_0756	-	histidine biosynthesis protein
750	 74.15	0	858784..859545	+	253	153003629	-	Anae109_0757	-	imidazoleglycerol phosphate synthase, cyclase subunit
751	 60.51	-2	860546..860740	+	64	153003630	-	Anae109_0759	-	30S ribosomal protein S21
752	 70.00	0	860760..861209	+	149	153003631	-	Anae109_0760	-	GatB/Yqey domain-containing protein
753	 74.29	0	861303..863126	+	607	153003632	-	Anae109_0761	-	DNA primase
754	 67.80	-1	863123..865582	+	819	153003633	-	Anae109_0762	-	RNA polymerase, sigma 70 subunit, RpoD
755	 70.99	0	865713..866453	+	246	153003634	-	Anae109_0763	-	hypothetical protein
756	 72.94	0	866460..867224	+	254	153003635	-	Anae109_0764	-	ribonuclease H
757	 77.86	+1	867243..868010	-	255	153003636	-	Anae109_0765	-	hypothetical protein
758	 76.64	0	868025..869407	-	460	153003637	-	Anae109_0766	-	FAD-dependent pyridine nucleotide-disulphide oxidoreductase
759	 73.64	0	869466..869795	-	109	153003638	-	Anae109_0767	-	hypothetical protein
760	 68.82	-1	869831..870388	-	185	153003639	-	Anae109_0768	-	peptide deformylase
761	 79.90	+1	870460..873633	-	1057	153003640	-	Anae109_0769	-	heat shock protein DnaJ domain-containing protein
762	 77.54	+1	873730..875937	-	735	153003641	-	Anae109_0770	-	primosomal protein N'
763	 79.72	+1	876010..876714	+	234	153003642	-	Anae109_0771	-	hypothetical protein
764	 70.38	0	877156..878853	+	565	153003643	-	Anae109_0772	-	hypothetical protein
765	 74.33	0	878929..879567	-	212	153003644	-	Anae109_0773	-	hypothetical protein
766	 73.93	0	879631..880965	-	444	153003645	-	Anae109_0774	-	recombination factor protein RarA
767	 70.55	0	880983..881831	+	282	153003646	-	Anae109_0775	-	ATP-NAD/AcoX kinase
768	 77.56	+1	882352..884187	+	611	153003647	-	Anae109_0776	-	DNA repair protein RecN
769	 74.06	0	884129..885007	+	292	153003648	-	Anae109_0777	-	protein phosphatase 2C-like protein
770	 70.59	0	885197..886114	+	305	153003649	-	Anae109_0778	-	peptidase M23B
771	 77.87	+1	886155..886841	-	228	153003650	-	Anae109_0779	-	hypothetical protein
772	 67.87	-1	886982..889816	+	944	153003651	-	Anae109_0780	-	preprotein translocase, SecA subunit
773	 76.96	0	889951..891135	+	394	153003652	-	Anae109_0781	-	hypothetical protein
774	 74.19	0	891209..891766	-	185	153003653	-	Anae109_0782	-	CBS domain-containing protein
775	 77.30	+1	891822..892799	+	325	153003654	-	Anae109_0783	-	HhH-GPD family protein
776	 64.66	-2	892853..893101	+	82	153003655	-	Anae109_0784	-	AsnC family transcriptional regulator
777	 72.71	0	893124..894215	-	363	153003656	-	Anae109_0785	-	hypothetical protein
778	 75.42	0	894225..894932	-	235	153003657	-	Anae109_0786	-	oxidoreductase FAD/NAD(P)-binding subunit
779	 75.80	0	895021..895863	-	280	153003658	-	Anae109_0787	-	beta-lactamase domain-containing protein
780	 70.22	0	895930..896463	-	177	153003659	-	Anae109_0788	-	adenine phosphoribosyltransferase
781	 78.95	+1	896530..897384	-	284	153003660	-	Anae109_0789	-	peptidase M23B
782	 72.55	0	897381..898145	-	254	153003661	-	Anae109_0790	-	stationary-phase survival protein SurE
783	 74.19	0	898210..898701	-	163	153003662	-	Anae109_0791	-	MarR family transcriptional regulator
784	 78.64	+1	898849..900627	+	592	153003663	-	Anae109_0792	-	GAF sensor signal transduction histidine kinase
785	 79.30	+1	900735..902183	+	482	153003664	-	Anae109_0793	-	major facilitator transporter
786	 73.89	0	903389..903859	-	156	153003665	-	Anae109_0795	-	YbaK/prolyl-tRNA synthetase associated region
787	 78.05	+1	904090..904704	+	204	153003666	-	Anae109_0796	-	hypothetical protein
788	 77.59	+1	904821..905525	+	234	153003667	-	Anae109_0797	-	radical SAM domain-containing protein
789	 73.39	0	905509..906579	-	356	153003668	-	Anae109_0798	-	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
790	 69.80	0	906762..907622	+	286	153003669	-	Anae109_0799	-	anti-sigma-factor antagonist
791	 68.82	-1	907633..908004	+	123	153003670	-	Anae109_0800	-	anti-sigma-factor antagonist
792	 71.11	0	908012..908416	+	134	153003671	-	Anae109_0801	-	putative anti-sigma regulatory factor, serine/threonine protein kinase
793	 78.17	+1	908407..909414	+	335	153003672	-	Anae109_0802	-	putative anti-sigma regulatory factor, serine/threonine protein kinase
794	 72.79	0	909411..911567	+	718	153003673	-	Anae109_0803	-	histidine kinase
795	 76.15	0	911564..913555	+	663	153003674	-	Anae109_0804	-	multi-sensor signal transduction histidine kinase
796	 74.02	0	913567..914463	-	298	153003675	-	Anae109_0805	-	transporter DMT superfamily protein
797	 75.66	0	914528..914983	+	151	153003676	-	Anae109_0806	-	UspA domain-containing protein
798	 73.25	0	914958..915458	-	166	153003677	-	Anae109_0807	-	cyclase/dehydrase
799	 72.34	0	915555..916541	+	328	153003678	-	Anae109_0808	-	dihydroorotate dehydrogenase 2
800	 82.42	+2	916566..917219	+	217	153003679	-	Anae109_0809	-	diacylglycerol kinase
801	 73.95	0	917229..917489	-	86	153003680	-	Anae109_0810	-	hypothetical protein
802	 67.14	-1	917644..918063	+	139	153003681	-	Anae109_0811	-	rubrerythrin
803	 70.55	0	918160..919524	+	454	153003682	-	Anae109_0812	-	hypothetical protein
804	 73.44	0	919521..920081	+	186	153003683	-	Anae109_0813	-	hypothetical protein
805	 74.46	0	920360..920962	-	200	153003684	-	Anae109_0814	-	exonuclease RNase T and DNA polymerase III
806	 70.18	0	921131..921700	+	189	153003685	-	Anae109_0815	-	PfpI family intracellular peptidase
807	 71.35	0	922159..923226	-	355	153003686	-	Anae109_0816	-	HNH endonuclease
808	 73.45	0	923764..925575	-	603	153003687	-	Anae109_0817	-	CBS domain-containing protein
809	 73.30	0	925730..926347	+	205	153003688	-	Anae109_0818	-	hypothetical protein
810	 79.46	+1	926290..926844	-	184	153003689	-	Anae109_0819	-	adenylylsulfate kinase
811	 77.37	+1	926841..927980	-	379	153003690	-	Anae109_0820	-	hypothetical protein
812	 72.43	0	928148..928945	+	265	153003691	-	Anae109_0821	-	prolipoprotein diacylglyceryl transferase
813	 79.14	+1	928960..930867	+	635	153003692	-	Anae109_0822	-	heat shock protein DnaJ-like protein
814	 72.80	0	930872..931360	+	162	153003693	-	Anae109_0823	-	hypothetical protein
815	 69.47	0	931456..931848	+	130	153003694	-	Anae109_0824	-	response regulator receiver protein
816	 78.35	+1	931854..932897	+	347	153003695	-	Anae109_0825	-	NAD-dependent epimerase/dehydratase
817	 74.67	0	932905..934029	-	374	153003696	-	Anae109_0826	-	CBS domain-containing protein
818	 76.20	0	934385..935527	+	380	153003697	-	Anae109_0827	-	hypothetical protein
819	 80.00	+1	935503..936747	-	414	153003698	-	Anae109_0828	-	methyltransferase small
820	 72.72	0	936794..939616	+	940	153003699	-	Anae109_0829	-	alpha-ketoglutarate decarboxylase
821	 74.66	0	939621..940934	+	437	153003700	-	Anae109_0830	-	2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase
822	 73.07	0	940988..941737	-	249	153003701	-	Anae109_0831	-	hypothetical protein
823	 75.29	0	941763..943733	-	656	153003702	-	Anae109_0832	-	DNA ligase D
824	 78.49	+1	943755..946520	-	921	153003703	-	Anae109_0833	-	ATP-dependent helicase HrpB
825	 75.60	0	946610..948478	+	622	153003704	-	Anae109_0834	-	methyl-accepting chemotaxis sensory transducer
826	 70.11	0	948668..950959	-	763	153003705	-	Anae109_0835	-	ATP-dependent Clp protease, ATP-binding subunit clpA
827	 67.28	-1	950962..951288	-	108	153003706	-	Anae109_0836	-	ATP-dependent Clp protease adaptor protein ClpS
828	 75.28	0	951537..952244	-	235	153003707	-	Anae109_0837	-	leucyl/phenylalanyl-tRNA--protein transferase
829	 75.40	0	952325..952942	-	205	153003708	-	Anae109_0838	-	hypothetical protein
830	 72.30	0	953051..953902	-	283	153003709	-	Anae109_0839	-	ECF subfamily RNA polymerase sigma-24 factor
831	 67.43	-1	954195..954845	+	216	153003710	-	Anae109_0840	-	hypothetical protein
832	 74.80	0	954833..957856	+	1007	153003711	-	Anae109_0841	-	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
833	 67.91	-1	957853..959301	+	482	153003712	-	Anae109_0842	-	polysulphide reductase NrfD
834	 72.16	0	959298..959825	+	175	153003713	-	Anae109_0843	-	transmembrane prediction
835	 74.52	0	959827..960399	+	190	153003714	-	Anae109_0844	-	hypothetical protein
836	 69.11	-1	960396..961580	+	394	153003715	-	Anae109_0845	-	hypothetical protein
837	 75.68	0	961577..962020	+	147	153003716	-	Anae109_0846	-	hypothetical protein
838	 72.77	0	962017..962868	+	283	153003717	-	Anae109_0847	-	SCO1/SenC family protein
839	 69.32	-1	962865..963920	+	351	153003718	-	Anae109_0848	-	cytochrome c oxidase subunit II
840	 65.71	-1	963895..965562	+	555	153003719	-	Anae109_0849	-	cytochrome c oxidase subunit I type
73.23	MEAN

3.77	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.