IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter sp. Fw109-5



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 73.23 STD DEV: 3.77
Anaeromyxobacter sp. Fw109-5, complete genome - 1..5277990
4466 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
694	 79.34	+1	795443..796105	-	220	153003573	-	Anae109_0701	-	methyltransferase type 11
695	 78.68	+1	796102..797025	-	307	153003574	-	Anae109_0702	-	Ppx/GppA phosphatase
696	 73.82	0	797033..798346	-	437	153003575	-	Anae109_0703	-	TolB domain-containing protein
697	 74.28	0	798343..799104	-	253	153003576	-	Anae109_0704	-	TonB family protein
698	 67.54	-1	799105..799563	-	152	153003577	-	Anae109_0705	-	biopolymer transport protein ExbD/TolR
699	 67.75	-1	799576..800313	-	245	153003578	-	Anae109_0706	-	Tol-Pal system TolQ
700	 71.54	0	800783..801439	+	218	153003579	-	Anae109_0707	-	LigA
701	 76.41	0	801450..802229	+	259	153003580	-	Anae109_0708	-	glutamate racemase
702	 69.95	0	802510..803058	+	182	153003581	-	Anae109_0709	-	hypothetical protein
703	 72.08	0	803075..803758	+	227	153003582	-	Anae109_0710	-	cell division ATP-binding protein FtsE
704	 78.98	+1	803761..804645	+	294	153003583	-	Anae109_0711	-	hypothetical protein
705	 80.05	+1	804649..805761	+	370	153003584	-	Anae109_0712	-	peptidase M23B
706	 74.64	0	805839..807218	+	459	153003585	-	Anae109_0713	-	carboxyl-terminal protease
707	 68.13	-1	807390..808895	+	501	153003586	-	Anae109_0714	-	glycosyl transferase family protein
708	 75.79	0	808982..809518	-	178	153003587	-	Anae109_0715	-	GCN5-related N-acetyltransferase
709	 74.29	0	809691..810713	-	340	153003588	-	Anae109_0716	-	glycosyl transferase family protein
710	 77.73	+1	810792..811496	-	234	153003589	-	Anae109_0717	-	hydrolase
711	 76.11	0	811704..813101	-	465	153003590	-	Anae109_0718	-	signal recognition particle-docking protein FtsY
712	 72.76	0	813352..816948	-	1198	153003591	-	Anae109_0719	-	chromosome segregation protein SMC
713	 74.18	0	817204..818121	-	305	153003592	-	Anae109_0720	-	hypothetical protein
714	 72.04	0	818127..818684	-	185	153003593	-	Anae109_0721	-	hypothetical protein
715	 77.63	+1	818688..820274	-	528	153003594	-	Anae109_0722	-	fimbrial assembly family protein
716	 73.22	0	820278..821636	-	452	153003595	-	Anae109_0723	-	hypothetical protein
717	 72.78	0	821636..822355	-	239	153003596	-	Anae109_0724	-	hypothetical protein
718	 75.08	0	822355..823020	-	221	153003597	-	Anae109_0725	-	hypothetical protein
719	 75.16	0	823017..823628	-	203	153003598	-	Anae109_0726	-	hypothetical protein
720	 66.43	-1	823636..824049	-	137	153003599	-	Anae109_0727	-	general secretion pathway protein G
721	 70.98	0	824055..825284	-	409	153003600	-	Anae109_0728	-	general secretion pathway protein F
722	 70.20	0	825288..827099	-	603	153003601	-	Anae109_0729	-	general secretory pathway protein E
723	 72.42	0	827118..829796	-	892	153003602	-	Anae109_0730	-	general secretion pathway protein D
724	 71.23	0	829818..830846	-	342	153003603	-	Anae109_0731	-	hypothetical protein
725	 74.15	0	830993..832408	-	471	153003604	-	Anae109_0732	-	two component, sigma54 specific, Fis family transcriptional regulator
726	 68.32	-1	832759..833121	-	120	153003605	-	Anae109_0733	-	ribosomal protein L31
727	 66.59	-1	833246..834559	-	437	153003606	-	Anae109_0734	-	transcription termination factor Rho
728	 74.52	0	834817..836916	+	699	153003607	-	Anae109_0735	-	DNA ligase, NAD-dependent
729	 78.01	+1	836916..837197	+	93	153003608	-	Anae109_0736	-	acylphosphatase
730	 72.64	0	837369..840062	+	897	153003609	-	Anae109_0737	-	radical SAM domain-containing protein
731	 70.85	0	840250..842472	+	740	153003610	-	Anae109_0738	-	ribonuclease
732	 72.49	0	842478..843782	+	434	153003611	-	Anae109_0739	-	putative ribonuclease BN
733	 66.93	-1	843928..844308	+	126	153003612	-	Anae109_0740	-	histone family protein DNA-binding protein
734	 78.73	+1	844390..846411	-	673	153003613	-	Anae109_0741	-	type III secretion FHIPEP protein
735	 80.62	+1	846408..847439	-	343	153003614	-	Anae109_0742	-	type III secretion exporter
736	 81.08	+2	847436..848212	-	258	153003615	-	Anae109_0743	-	type III secretion system inner membrane R protein
737	 77.53	+1	848209..848475	-	88	153003616	-	Anae109_0744	-	export protein FliQ
738	 75.15	0	848481..849152	-	223	153003617	-	Anae109_0745	-	type III secretion system protein
739	 83.75	+2	849149..849511	-	120	153003618	-	Anae109_0746	-	hypothetical protein
740	 78.61	+1	849508..850512	-	334	153003619	-	Anae109_0747	-	type III secretion system apparatus protein YscQ/HrcQ
741	 78.33	+1	850967..851686	-	239	153003620	-	Anae109_0748	-	secretory protein YscJ/FliF family protein
742	 78.53	+1	851699..852052	-	117	153003621	-	Anae109_0749	-	hypothetical protein
743	 71.67	0	852060..852479	-	139	153003622	-	Anae109_0750	-	hypothetical protein
744	 71.77	0	852640..853953	+	437	153003623	-	Anae109_0751	-	hypothetical protein
745	 75.27	0	854047..855162	-	371	153003624	-	Anae109_0752	-	hypothetical protein
746	 77.50	+1	855336..856757	+	473	153003625	-	Anae109_0753	-	histidinol dehydrogenase
747	 72.01	0	856754..857371	+	205	153003626	-	Anae109_0754	-	imidazoleglycerol-phosphate dehydratase
748	 74.96	0	857430..858044	+	204	153003627	-	Anae109_0755	-	imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
749	 75.59	0	858053..858769	+	238	153003628	-	Anae109_0756	-	histidine biosynthesis protein
750	 74.15	0	858784..859545	+	253	153003629	-	Anae109_0757	-	imidazoleglycerol phosphate synthase, cyclase subunit
751	 60.51	-2	860546..860740	+	64	153003630	-	Anae109_0759	-	30S ribosomal protein S21
752	 70.00	0	860760..861209	+	149	153003631	-	Anae109_0760	-	GatB/Yqey domain-containing protein
753	 74.29	0	861303..863126	+	607	153003632	-	Anae109_0761	-	DNA primase
754	 67.80	-1	863123..865582	+	819	153003633	-	Anae109_0762	-	RNA polymerase, sigma 70 subunit, RpoD
755	 70.99	0	865713..866453	+	246	153003634	-	Anae109_0763	-	hypothetical protein
756	 72.94	0	866460..867224	+	254	153003635	-	Anae109_0764	-	ribonuclease H
757	 77.86	+1	867243..868010	-	255	153003636	-	Anae109_0765	-	hypothetical protein
758	 76.64	0	868025..869407	-	460	153003637	-	Anae109_0766	-	FAD-dependent pyridine nucleotide-disulphide oxidoreductase
759	 73.64	0	869466..869795	-	109	153003638	-	Anae109_0767	-	hypothetical protein
760	 68.82	-1	869831..870388	-	185	153003639	-	Anae109_0768	-	peptide deformylase
761	 79.90	+1	870460..873633	-	1057	153003640	-	Anae109_0769	-	heat shock protein DnaJ domain-containing protein
762	 77.54	+1	873730..875937	-	735	153003641	-	Anae109_0770	-	primosomal protein N'
763	 79.72	+1	876010..876714	+	234	153003642	-	Anae109_0771	-	hypothetical protein
764	 70.38	0	877156..878853	+	565	153003643	-	Anae109_0772	-	hypothetical protein
765	 74.33	0	878929..879567	-	212	153003644	-	Anae109_0773	-	hypothetical protein
766	 73.93	0	879631..880965	-	444	153003645	-	Anae109_0774	-	recombination factor protein RarA
767	 70.55	0	880983..881831	+	282	153003646	-	Anae109_0775	-	ATP-NAD/AcoX kinase
768	 77.56	+1	882352..884187	+	611	153003647	-	Anae109_0776	-	DNA repair protein RecN
769	 74.06	0	884129..885007	+	292	153003648	-	Anae109_0777	-	protein phosphatase 2C-like protein
770	 70.59	0	885197..886114	+	305	153003649	-	Anae109_0778	-	peptidase M23B
771	 77.87	+1	886155..886841	-	228	153003650	-	Anae109_0779	-	hypothetical protein
772	 67.87	-1	886982..889816	+	944	153003651	-	Anae109_0780	-	preprotein translocase, SecA subunit
773	 76.96	0	889951..891135	+	394	153003652	-	Anae109_0781	-	hypothetical protein
774	 74.19	0	891209..891766	-	185	153003653	-	Anae109_0782	-	CBS domain-containing protein
775	 77.30	+1	891822..892799	+	325	153003654	-	Anae109_0783	-	HhH-GPD family protein
776	 64.66	-2	892853..893101	+	82	153003655	-	Anae109_0784	-	AsnC family transcriptional regulator
777	 72.71	0	893124..894215	-	363	153003656	-	Anae109_0785	-	hypothetical protein
778	 75.42	0	894225..894932	-	235	153003657	-	Anae109_0786	-	oxidoreductase FAD/NAD(P)-binding subunit
779	 75.80	0	895021..895863	-	280	153003658	-	Anae109_0787	-	beta-lactamase domain-containing protein
780	 70.22	0	895930..896463	-	177	153003659	-	Anae109_0788	-	adenine phosphoribosyltransferase
781	 78.95	+1	896530..897384	-	284	153003660	-	Anae109_0789	-	peptidase M23B
782	 72.55	0	897381..898145	-	254	153003661	-	Anae109_0790	-	stationary-phase survival protein SurE
783	 74.19	0	898210..898701	-	163	153003662	-	Anae109_0791	-	MarR family transcriptional regulator
784	 78.64	+1	898849..900627	+	592	153003663	-	Anae109_0792	-	GAF sensor signal transduction histidine kinase
785	 79.30	+1	900735..902183	+	482	153003664	-	Anae109_0793	-	major facilitator transporter
786	 73.89	0	903389..903859	-	156	153003665	-	Anae109_0795	-	YbaK/prolyl-tRNA synthetase associated region
787	 78.05	+1	904090..904704	+	204	153003666	-	Anae109_0796	-	hypothetical protein
788	 77.59	+1	904821..905525	+	234	153003667	-	Anae109_0797	-	radical SAM domain-containing protein
789	 73.39	0	905509..906579	-	356	153003668	-	Anae109_0798	-	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
790	 69.80	0	906762..907622	+	286	153003669	-	Anae109_0799	-	anti-sigma-factor antagonist
791	 68.82	-1	907633..908004	+	123	153003670	-	Anae109_0800	-	anti-sigma-factor antagonist
792	 71.11	0	908012..908416	+	134	153003671	-	Anae109_0801	-	putative anti-sigma regulatory factor, serine/threonine protein kinase
793	 78.17	+1	908407..909414	+	335	153003672	-	Anae109_0802	-	putative anti-sigma regulatory factor, serine/threonine protein kinase
73.23	MEAN

3.77	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.