IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter sp. Fw109-5



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 73.23 STD DEV: 3.77
Anaeromyxobacter sp. Fw109-5, complete genome - 1..5277990
4466 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
600	 71.51	0	685641..686879	-	412	153003479	-	Anae109_0607	-	filamentation induced by cAMP protein Fic
601	 68.22	-1	687008..687394	+	128	153003480	-	Anae109_0608	-	hypothetical protein
602	 71.61	0	687404..688354	+	316	153003481	-	Anae109_0609	-	hypothetical protein
603	 74.87	0	689001..691718	+	905	153003482	-	Anae109_0610	-	type III restriction protein res subunit
604	 75.21	0	692189..693358	-	389	153003483	-	Anae109_0611	-	acetylornithine deacetylase (ArgE)
605	 78.23	+1	693363..694703	-	446	153003484	-	Anae109_0612	-	N-formimino-L-glutamate deiminase
606	 76.15	0	694828..695628	+	266	153003485	-	Anae109_0613	-	diaminopimelate epimerase
607	 74.80	0	695632..697500	+	622	153003486	-	Anae109_0614	-	putative GAF sensor protein
608	 77.57	+1	697515..698972	+	485	153003487	-	Anae109_0615	-	response regulator receiver protein
609	 77.00	+1	699008..699820	+	270	153003488	-	Anae109_0616	-	PhzF family phenazine biosynthesis protein
610	 76.01	0	699867..700187	-	106	153003489	-	Anae109_0617	-	hypothetical protein
611	 73.56	0	700240..700689	-	149	153003490	-	Anae109_0618	-	hemerythrin-like metal-binding protein
612	 73.96	0	700884..702308	-	474	153003491	-	Anae109_0619	-	peptidase M16 domain-containing protein
613	 74.25	0	702305..703861	-	518	153003492	-	Anae109_0620	-	integral membrane sensor signal transduction histidine kinase
614	 77.78	+1	704027..704854	+	275	153003493	-	Anae109_0621	-	hypothetical protein
615	 73.49	0	704917..705561	-	214	153003494	-	Anae109_0622	-	hypothetical protein
616	 74.80	0	705643..706650	+	335	153003495	-	Anae109_0623	-	DeoR family transcriptional regulator
617	 77.42	+1	706647..707753	+	368	153003496	-	Anae109_0624	-	transcriptional regulator-like protein
618	 73.22	0	707941..708306	+	121	153003497	-	Anae109_0625	-	response regulator receiver protein
619	 68.54	-1	709461..709727	-	88	153003498	-	Anae109_0626	-	hypothetical protein
620	 70.49	0	709823..710110	+	95	153003499	-	Anae109_0627	-	hypothetical protein
621	 73.81	0	710214..711095	-	293	153003500	-	Anae109_0628	-	6-phosphogluconate dehydrogenase NAD-binding
622	 73.07	0	711270..712487	+	405	153003501	-	Anae109_0629	-	amine oxidase
623	 73.70	0	712488..715160	-	890	153003502	-	Anae109_0630	-	ATPase
624	 78.62	+1	715276..715752	-	158	153003503	-	Anae109_0631	-	arginine repressor, ArgR
625	 72.34	0	715749..717845	-	698	153003504	-	Anae109_0632	-	arginine biosynthesis bifunctional protein ArgJ
626	 76.52	0	717847..718881	-	344	153003505	-	Anae109_0633	-	N-acetyl-gamma-glutamyl-phosphate reductase
627	 76.72	0	719195..720010	+	271	153003506	-	Anae109_0634	-	hypothetical protein
628	 74.78	0	720142..721164	+	340	153003507	-	Anae109_0635	-	hypothetical protein
629	 73.52	0	721189..722589	-	466	153003508	-	Anae109_0636	-	cytochrome c biogenesis protein transmembrane region
630	 69.63	0	722743..723957	+	404	153003509	-	Anae109_0637	-	aminotransferase class V
631	 67.32	-1	723972..724433	+	153	153003510	-	Anae109_0638	-	scaffold protein
632	 68.18	-1	724447..724776	+	109	153003511	-	Anae109_0639	-	iron-sulfur cluster assembly accessory protein
633	 73.40	0	724849..725472	+	207	153003512	-	Anae109_0640	-	co-chaperone Hsc20
634	 73.45	0	725485..727371	+	628	153003513	-	Anae109_0641	-	chaperone protein HscA
635	 71.24	0	727378..727683	+	101	153003514	-	Anae109_0642	-	ferredoxin
636	 68.69	-1	727700..727897	+	65	153003515	-	Anae109_0643	-	hypothetical protein
637	 76.60	0	727916..728992	-	358	153003516	-	Anae109_0644	-	response regulator receiver modulated CheB methylesterase
638	 74.81	0	728992..729900	-	302	153003517	-	Anae109_0645	-	protein-glutamate O-methyltransferase
639	 72.94	0	729904..730461	-	185	153003518	-	Anae109_0646	-	putative CheW protein
640	 75.85	0	730480..732156	-	558	153003519	-	Anae109_0647	-	CheA signal transduction histidine kinase
641	 76.02	0	732165..732677	-	170	153003520	-	Anae109_0648	-	hypothetical protein
642	 76.17	0	732674..733483	-	269	153003521	-	Anae109_0649	-	GAF domain-containing protein
643	 65.59	-2	733494..733865	-	123	153003522	-	Anae109_0650	-	response regulator receiver protein
644	 79.20	+1	734211..734936	+	241	153003523	-	Anae109_0651	-	hypothetical protein
645	 80.02	+1	734933..735868	+	311	153003524	-	Anae109_0652	-	hypothetical protein
646	 69.12	-1	735877..736569	-	230	153003525	-	Anae109_0653	-	response regulator receiver protein
647	 76.08	0	736645..737154	+	169	153003526	-	Anae109_0654	-	putative CheW protein
648	 74.36	0	737151..737540	+	129	153003527	-	Anae109_0655	-	CheW domain-containing protein
649	 70.92	0	737560..738828	+	422	153003528	-	Anae109_0656	-	methyl-accepting chemotaxis sensory transducer
650	 74.79	0	738865..741141	+	758	153003529	-	Anae109_0657	-	CheA signal transduction histidine kinase
651	 76.34	0	741138..742160	+	340	153003530	-	Anae109_0658	-	response regulator receiver modulated CheB methylesterase
652	 76.20	0	742157..743656	+	499	153003531	-	Anae109_0659	-	protein-glutamate O-methyltransferase
653	 63.02	-2	743665..744048	+	127	153003532	-	Anae109_0660	-	response regulator receiver protein
654	 70.01	0	744172..744918	+	248	153003533	-	Anae109_0661	-	hypothetical protein
655	 75.33	0	744940..746244	+	434	153003534	-	Anae109_0662	-	pyrimidine-nucleoside phosphorylase
656	 73.85	0	746292..747140	+	282	153003535	-	Anae109_0663	-	inosine guanosine and xanthosine phosphorylase family protein
657	 71.77	0	747187..747558	+	123	153003536	-	Anae109_0664	-	type IV pilus assembly PilZ
658	 78.66	+1	747737..748153	+	138	153003537	-	Anae109_0665	-	cytidine deaminase
659	 76.37	0	748215..749183	+	322	153003538	-	Anae109_0666	-	riboflavin biosynthesis protein RibF
660	 65.67	-2	749317..751023	+	568	153003539	-	Anae109_0667	-	type IV-A pilus assembly ATPase PilB
661	 67.67	-1	751055..752152	+	365	153003540	-	Anae109_0668	-	twitching motility protein
662	 67.38	-1	752214..753473	+	419	153003541	-	Anae109_0669	-	type II secretion system protein
663	 75.62	0	753489..755129	+	546	153003542	-	Anae109_0670	-	signal transduction histidine kinase, nitrogen specific, NtrB
664	 73.65	0	755139..756512	+	457	153003543	-	Anae109_0671	-	two component, sigma54 specific, Fis family transcriptional regulator
665	 69.05	-1	756632..761632	-	1666	153003544	-	Anae109_0672	-	Tfp pilus assembly protein tip-associated adhesin PilY1-like protein
666	 73.61	0	761650..762153	-	167	153003545	-	Anae109_0673	-	hypothetical protein
667	 71.89	0	762162..763424	-	420	153003546	-	Anae109_0674	-	hypothetical protein
668	 74.83	0	763430..764017	-	195	153003547	-	Anae109_0675	-	hypothetical protein
669	 71.67	0	764026..764664	-	212	153003548	-	Anae109_0676	-	hypothetical protein
670	 71.15	0	764817..766667	+	616	153003549	-	Anae109_0677	-	TPR repeat-containing protein
671	 71.54	0	766699..767457	-	252	153003550	-	Anae109_0678	-	hypothetical protein
672	 70.29	0	767454..768365	-	303	153003551	-	Anae109_0679	-	hypothetical protein
673	 67.00	-1	768450..769046	-	198	153003552	-	Anae109_0680	-	fimbrial protein pilin
674	 72.35	0	769288..770307	+	339	153003553	-	Anae109_0681	-	ABC transporter related
675	 74.80	0	770311..771183	+	290	153003554	-	Anae109_0682	-	peptidase A24A domain-containing protein
676	 79.27	+1	771187..772329	+	380	153003555	-	Anae109_0683	-	integral membrane sensor signal transduction histidine kinase
677	 73.74	0	772378..773748	+	456	153003556	-	Anae109_0684	-	two component, sigma54 specific, Fis family transcriptional regulator
678	 72.87	0	773965..774222	+	85	153003557	-	Anae109_0685	-	XRE family transcriptional regulator
679	 67.99	-1	774278..775333	+	351	153003558	-	Anae109_0686	-	type IV pilus assembly protein PilM
680	 66.67	-1	775336..775917	+	193	153003559	-	Anae109_0687	-	fimbrial assembly family protein
681	 64.76	-2	775924..776553	+	209	153003560	-	Anae109_0688	-	type IV pilus biogenesis protein PilO
682	 74.03	0	776550..777092	+	180	153003561	-	Anae109_0689	-	hypothetical protein
683	 72.00	0	777098..779779	+	893	153003562	-	Anae109_0690	-	type IV pilus secretin PilQ
684	 70.53	0	779788..780408	+	206	153003563	-	Anae109_0691	-	hypothetical protein
685	 71.90	0	780526..780888	+	120	153003564	-	Anae109_0692	-	hypothetical protein
686	 63.35	-2	780984..781556	+	190	153003565	-	Anae109_0693	-	translation elongation factor P
687	 72.70	0	781593..782156	+	187	153003566	-	Anae109_0694	-	acetyl-CoA carboxylase, biotin carboxyl carrier protein
688	 69.86	0	782175..783554	+	459	153003567	-	Anae109_0695	-	acetyl-CoA carboxylase, biotin carboxylase
689	 75.76	0	783764..786445	+	893	153003568	-	Anae109_0696	-	TPR repeat-containing protein
690	 70.23	0	786458..787354	+	298	153003569	-	Anae109_0697	-	general secretion pathway protein-related protein
691	 77.12	+1	787403..791335	+	1310	153003570	-	Anae109_0698	-	hypothetical protein
692	 76.35	0	791320..794571	+	1083	153003571	-	Anae109_0699	-	surface antigen (D15)
693	 73.39	0	794775..795428	-	217	153003572	-	Anae109_0700	-	HAD family hydrolase
694	 79.34	+1	795443..796105	-	220	153003573	-	Anae109_0701	-	methyltransferase type 11
695	 78.68	+1	796102..797025	-	307	153003574	-	Anae109_0702	-	Ppx/GppA phosphatase
696	 73.82	0	797033..798346	-	437	153003575	-	Anae109_0703	-	TolB domain-containing protein
697	 74.28	0	798343..799104	-	253	153003576	-	Anae109_0704	-	TonB family protein
698	 67.54	-1	799105..799563	-	152	153003577	-	Anae109_0705	-	biopolymer transport protein ExbD/TolR
699	 67.75	-1	799576..800313	-	245	153003578	-	Anae109_0706	-	Tol-Pal system TolQ
73.23	MEAN

3.77	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.