IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter sp. Fw109-5



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 73.23 STD DEV: 3.77
Anaeromyxobacter sp. Fw109-5, complete genome - 1..5277990
4466 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
532	 71.43	0	612518..612979	+	153	153003411	-	Anae109_0538	-	spore coat U domain-containing protein
533	 75.93	0	613058..615508	+	816	153003412	-	Anae109_0539	-	multi-sensor hybrid histidine kinase
534	 70.54	0	615526..620976	+	1816	153003413	-	Anae109_0540	-	GAF sensor hybrid histidine kinase
535	 73.36	0	620978..621814	+	278	153003414	-	Anae109_0541	-	protein-glutamate O-methyltransferase
536	 72.52	0	621818..622483	-	221	153003415	-	Anae109_0542	-	hypothetical protein
537	 75.85	0	622635..623309	+	224	153003416	-	Anae109_0543	-	hypothetical protein
538	 75.83	0	623336..624208	+	290	153003417	-	Anae109_0544	-	hypothetical protein
539	 74.60	0	624243..625250	+	335	153003418	-	Anae109_0545	-	cytochrome oxidase assembly
540	 69.90	0	625386..626003	+	205	153003419	-	Anae109_0546	-	OmpA/MotB domain-containing protein
541	 72.62	0	626308..627264	+	318	153003420	-	Anae109_0547	-	hypothetical protein
542	 72.55	0	627381..627788	+	135	153003421	-	Anae109_0548	-	hemerythrin-like metal-binding protein
543	 72.66	0	627908..628924	+	338	153003422	-	Anae109_0549	-	hypothetical protein
544	 71.51	0	629659..630690	+	343	153003423	-	Anae109_0550	-	aldo/keto reductase
545	 80.19	+1	630702..631559	-	285	153003424	-	Anae109_0551	-	S1/P1 nuclease
546	 70.47	0	631662..632660	-	332	153003425	-	Anae109_0552	-	hypothetical protein
547	 71.59	0	632695..634197	-	500	153003426	-	Anae109_0553	-	hypothetical protein
548	 74.12	0	634205..634714	-	169	153003427	-	Anae109_0554	-	hypothetical protein
549	 72.17	0	635063..635698	+	211	153003428	-	Anae109_0555	-	hypothetical protein
550	 77.40	+1	635695..636849	+	384	153003429	-	Anae109_0556	-	peptidase M48 Ste24p
551	 70.70	0	636846..637415	+	189	153003430	-	Anae109_0557	-	hypothetical protein
552	 77.14	+1	637448..638602	+	384	153003431	-	Anae109_0558	-	major facilitator transporter
553	 73.54	0	638617..639096	-	159	153003432	-	Anae109_0559	-	DoxX family protein
554	 77.82	+1	639241..640110	-	289	153003433	-	Anae109_0560	-	methyltransferase
555	 71.03	0	640291..641505	+	404	153003434	-	Anae109_0561	-	alcohol dehydrogenase
556	 71.37	0	641569..642057	-	162	153003435	-	Anae109_0562	-	cupin 2, barrel
557	 75.37	0	642189..642935	-	248	153003436	-	Anae109_0563	-	beta-lactamase domain-containing protein
558	 75.14	0	642992..644266	+	424	153003437	-	Anae109_0564	-	hypothetical protein
559	 77.67	+1	644275..645246	+	323	153003438	-	Anae109_0565	-	glycosyl transferase group 1
560	 78.04	+1	645253..646500	-	415	153003439	-	Anae109_0566	-	major facilitator transporter
561	 76.65	0	646497..647948	-	483	153003440	-	Anae109_0567	-	RND efflux system outer membrane lipoprotein
562	 70.81	0	647941..651105	-	1054	153003441	-	Anae109_0568	-	hydrophobe/amphiphile efflux-1 (HAE1) family protein
563	 74.00	0	651135..652280	-	381	153003442	-	Anae109_0569	-	RND family efflux transporter MFP subunit
564	 74.13	0	652375..653004	+	209	153003443	-	Anae109_0570	-	TetR family transcriptional regulator
565	 78.97	+1	653062..654036	-	324	153003444	-	Anae109_0571	-	CHAD domain-containing protein
566	 73.57	0	654039..654632	-	197	153003445	-	Anae109_0572	-	inorganic pyrophosphatase
567	 72.27	0	654732..656963	+	743	153003446	-	Anae109_0573	-	polyphosphate kinase
568	 76.43	0	657399..658934	+	511	153003447	-	Anae109_0574	-	Ppx/GppA phosphatase
569	 70.62	0	659045..659677	-	210	153003448	-	Anae109_0575	-	LigA
570	 72.22	0	659879..660310	-	143	153003449	-	Anae109_0576	-	DoxX family protein
571	 71.17	0	660446..660778	+	110	153003450	-	Anae109_0577	-	regulatory protein ArsR
572	 77.35	+1	660840..661073	+	77	153003451	-	Anae109_0578	-	hypothetical protein
573	 70.68	0	661088..661585	-	165	153003452	-	Anae109_0579	-	hypothetical protein
574	 70.99	0	661582..662367	-	261	153003453	-	Anae109_0580	-	DGPFAETKE family protein
575	 73.43	0	662574..663800	+	408	153003454	-	Anae109_0581	-	CHRD domain-containing protein
576	 74.57	0	663837..664646	-	269	153003455	-	Anae109_0582	-	Rieske (2Fe-2S) domain-containing protein
577	 71.92	0	664643..665194	-	183	153003456	-	Anae109_0583	-	hypothetical protein
578	 70.73	0	665389..665880	+	163	153003457	-	Anae109_0584	-	ECF subfamily RNA polymerase sigma-24 factor
579	 74.97	0	665877..666611	+	244	153003458	-	Anae109_0585	-	hypothetical protein
580	 71.72	0	666650..667282	-	210	153003459	-	Anae109_0586	-	hypothetical protein
581	 71.10	0	667518..668396	+	292	153003460	-	Anae109_0587	-	hypothetical protein
582	 77.54	+1	668402..669505	-	367	153003461	-	Anae109_0588	-	methyl-accepting chemotaxis sensory transducer
583	 70.08	0	669677..670204	+	175	153003462	-	Anae109_0589	-	putative transcriptional regulator
584	 73.77	0	670296..671210	+	304	153003463	-	Anae109_0590	-	NAD-dependent epimerase/dehydratase
585	 74.38	0	671283..671891	-	202	153003464	-	Anae109_0591	-	YhhN family protein
586	 71.05	0	671987..672898	-	303	153003465	-	Anae109_0592	-	short chain dehydrogenase
587	 76.33	0	673107..673406	+	99	153003466	-	Anae109_0593	-	hypothetical protein
588	 75.30	0	673565..674479	+	304	153003467	-	Anae109_0594	-	hypothetical protein
589	 76.05	0	674490..675086	-	198	153003468	-	Anae109_0595	-	carbohydrate kinase
590	 73.96	0	675273..676286	+	337	153003469	-	Anae109_0596	-	6-phosphogluconate dehydrogenase-like protein
591	 70.40	0	676283..677647	+	454	153003470	-	Anae109_0597	-	glucose-6-phosphate 1-dehydrogenase
592	 76.92	0	677658..678242	+	194	153003471	-	Anae109_0598	-	phosphoglycerate mutase
593	 76.67	0	678239..678928	+	229	153003472	-	Anae109_0599	-	6-phosphogluconolactonase
594	 74.25	0	678973..680595	+	540	153003473	-	Anae109_0600	-	SARP family transcriptional regulator
595	 73.96	0	680754..681863	+	369	153003474	-	Anae109_0601	-	Fis family transcriptional regulator
596	 71.51	0	681926..682297	+	123	153003475	-	Anae109_0602	-	regulatory protein ArsR
597	 70.89	0	682294..682719	+	141	153003476	-	Anae109_0603	-	hypothetical protein
598	 71.15	0	682755..683222	+	155	153003477	-	Anae109_0604	-	activator of Hsp90 ATPase 1 family protein
599	 70.73	0	684078..685406	-	442	153003478	-	Anae109_0606	-	transposase IS4 family protein
600	 71.51	0	685641..686879	-	412	153003479	-	Anae109_0607	-	filamentation induced by cAMP protein Fic
601	 68.22	-1	687008..687394	+	128	153003480	-	Anae109_0608	-	hypothetical protein
602	 71.61	0	687404..688354	+	316	153003481	-	Anae109_0609	-	hypothetical protein
603	 74.87	0	689001..691718	+	905	153003482	-	Anae109_0610	-	type III restriction protein res subunit
604	 75.21	0	692189..693358	-	389	153003483	-	Anae109_0611	-	acetylornithine deacetylase (ArgE)
605	 78.23	+1	693363..694703	-	446	153003484	-	Anae109_0612	-	N-formimino-L-glutamate deiminase
606	 76.15	0	694828..695628	+	266	153003485	-	Anae109_0613	-	diaminopimelate epimerase
607	 74.80	0	695632..697500	+	622	153003486	-	Anae109_0614	-	putative GAF sensor protein
608	 77.57	+1	697515..698972	+	485	153003487	-	Anae109_0615	-	response regulator receiver protein
609	 77.00	+1	699008..699820	+	270	153003488	-	Anae109_0616	-	PhzF family phenazine biosynthesis protein
610	 76.01	0	699867..700187	-	106	153003489	-	Anae109_0617	-	hypothetical protein
611	 73.56	0	700240..700689	-	149	153003490	-	Anae109_0618	-	hemerythrin-like metal-binding protein
612	 73.96	0	700884..702308	-	474	153003491	-	Anae109_0619	-	peptidase M16 domain-containing protein
613	 74.25	0	702305..703861	-	518	153003492	-	Anae109_0620	-	integral membrane sensor signal transduction histidine kinase
614	 77.78	+1	704027..704854	+	275	153003493	-	Anae109_0621	-	hypothetical protein
615	 73.49	0	704917..705561	-	214	153003494	-	Anae109_0622	-	hypothetical protein
616	 74.80	0	705643..706650	+	335	153003495	-	Anae109_0623	-	DeoR family transcriptional regulator
617	 77.42	+1	706647..707753	+	368	153003496	-	Anae109_0624	-	transcriptional regulator-like protein
618	 73.22	0	707941..708306	+	121	153003497	-	Anae109_0625	-	response regulator receiver protein
619	 68.54	-1	709461..709727	-	88	153003498	-	Anae109_0626	-	hypothetical protein
620	 70.49	0	709823..710110	+	95	153003499	-	Anae109_0627	-	hypothetical protein
621	 73.81	0	710214..711095	-	293	153003500	-	Anae109_0628	-	6-phosphogluconate dehydrogenase NAD-binding
622	 73.07	0	711270..712487	+	405	153003501	-	Anae109_0629	-	amine oxidase
623	 73.70	0	712488..715160	-	890	153003502	-	Anae109_0630	-	ATPase
624	 78.62	+1	715276..715752	-	158	153003503	-	Anae109_0631	-	arginine repressor, ArgR
625	 72.34	0	715749..717845	-	698	153003504	-	Anae109_0632	-	arginine biosynthesis bifunctional protein ArgJ
626	 76.52	0	717847..718881	-	344	153003505	-	Anae109_0633	-	N-acetyl-gamma-glutamyl-phosphate reductase
627	 76.72	0	719195..720010	+	271	153003506	-	Anae109_0634	-	hypothetical protein
628	 74.78	0	720142..721164	+	340	153003507	-	Anae109_0635	-	hypothetical protein
629	 73.52	0	721189..722589	-	466	153003508	-	Anae109_0636	-	cytochrome c biogenesis protein transmembrane region
630	 69.63	0	722743..723957	+	404	153003509	-	Anae109_0637	-	aminotransferase class V
631	 67.32	-1	723972..724433	+	153	153003510	-	Anae109_0638	-	scaffold protein
73.23	MEAN

3.77	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.