IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter sp. Fw109-5



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 73.23 STD DEV: 3.77
Anaeromyxobacter sp. Fw109-5, complete genome - 1..5277990
4466 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
4199	 71.10	0	4970997..4971605	-	202	153007078	-	Anae109_4241	-	OsmC family protein
4200	 74.28	0	4971872..4973854	+	660	153007079	-	Anae109_4242	-	sigma-54 dependent trancsriptional regulator
4201	 76.24	0	4973931..4974776	-	281	153007080	-	Anae109_4243	-	hypothetical protein
4202	 75.11	0	4974911..4976272	-	453	153007081	-	Anae109_4244	-	amino acid permease-associated region
4203	 77.07	+1	4976331..4977512	-	393	153007082	-	Anae109_4245	-	aminotransferase class I and II
4204	 77.11	+1	4977660..4977908	+	82	153007083	-	Anae109_4246	-	hypothetical protein
4205	 74.85	0	4977993..4978799	-	268	153007084	-	Anae109_4247	-	triple helix repeat-containing collagen
4206	 71.46	0	4978996..4979496	+	166	153007085	-	Anae109_4248	-	hypothetical protein
4207	 74.81	0	4979515..4979907	-	130	153007086	-	Anae109_4249	-	hypothetical protein
4208	 75.84	0	4979943..4982852	+	969	153007087	-	Anae109_4250	-	PAS/PAC sensor signal transduction histidine kinase
4209	 77.68	+1	4982876..4984900	-	674	153007088	-	Anae109_4251	-	multi-sensor signal transduction histidine kinase
4210	 73.90	0	4984974..4985429	-	151	153007089	-	Anae109_4252	-	response regulator receiver protein
4211	 76.36	0	4985563..4987605	+	680	153007090	-	Anae109_4253	-	fibronectin type III domain-containing protein
4212	 75.16	0	4987727..4988209	-	160	153007091	-	Anae109_4254	-	hypothetical protein
4213	 78.13	+1	4988367..4990529	+	720	153007092	-	Anae109_4255	-	TonB-dependent receptor
4214	 73.94	0	4990543..4991298	-	251	153007093	-	Anae109_4256	-	diguanylate phosphodiesterase
4215	 74.50	0	4991444..4992835	-	463	153007094	-	Anae109_4257	-	two component, sigma54 specific, Fis family transcriptional regulator
4216	 75.74	0	4992836..4994356	-	506	153007095	-	Anae109_4258	-	histidine kinase
4217	 76.86	0	4994494..4995219	+	241	153007096	-	Anae109_4259	-	TonB family protein
4218	 72.40	0	4995255..4995620	-	121	153007097	-	Anae109_4260	-	hypothetical protein
4219	 68.28	-1	4996026..4996460	+	144	153007098	-	Anae109_4261	-	hypothetical protein
4220	 75.38	0	4996620..4998053	+	477	153007099	-	Anae109_4262	-	outer membrane efflux protein
4221	 72.94	0	4998067..4999581	+	504	153007100	-	Anae109_4263	-	RND family efflux transporter MFP subunit
4222	 67.12	-1	4999585..5002863	+	1092	153007101	-	Anae109_4264	-	CzcA family heavy metal efflux protein
4223	 78.40	+1	5002912..5003397	+	161	153007102	-	Anae109_4265	-	hypothetical protein
4224	 73.87	0	5003442..5004191	-	249	153007103	-	Anae109_4266	-	copper resistance B precursor
4225	 72.53	0	5004178..5006070	-	630	153007104	-	Anae109_4267	-	CopA family copper resistance protein
4226	 79.12	+1	5006285..5007529	+	414	153007105	-	Anae109_4268	-	Fmu (Sun) domain-containing protein
4227	 71.47	0	5007768..5009453	-	561	153007106	-	Anae109_4269	-	dihydroxy-acid dehydratase
4228	 76.75	0	5009477..5010220	+	247	153007107	-	Anae109_4270	-	NUDIX hydrolase
4229	 74.15	0	5010267..5011829	+	520	153007108	-	Anae109_4271	-	hypothetical protein
4230	 82.14	+2	5011839..5012426	+	195	153007109	-	Anae109_4272	-	hypothetical protein
4231	 81.05	+2	5012474..5013328	+	284	153007110	-	Anae109_4273	-	Sel1 domain-containing protein
4232	 74.24	0	5013510..5014103	-	197	153007111	-	Anae109_4274	-	response regulator receiver protein
4233	 71.87	0	5014436..5015818	+	460	153007112	-	Anae109_4275	-	putative lipoprotein
4234	 77.91	+1	5015733..5017031	-	432	153007113	-	Anae109_4276	-	NnrS family protein
4235	 69.48	0	5017097..5018836	+	579	153007114	-	Anae109_4277	-	acyl-CoA dehydrogenase domain-containing protein
4236	 76.29	0	5018901..5019596	-	231	153007115	-	Anae109_4278	-	glycine cleavage H-protein
4237	 72.71	0	5019983..5020561	+	192	153007116	-	Anae109_4279	-	hypothetical protein
4238	 74.49	0	5020713..5021543	-	276	153007117	-	Anae109_4280	-	hypothetical protein
4239	 84.00	+2	5021608..5022513	-	301	153007118	-	Anae109_4281	-	hypothetical protein
4240	 76.63	0	5022516..5023328	-	270	153007119	-	Anae109_4282	-	Linocin_M18 bacteriocin protein
4241	 70.96	0	5023325..5023837	-	170	153007120	-	Anae109_4283	-	hypothetical protein
4242	 78.21	+1	5023852..5024475	+	207	153007121	-	Anae109_4284	-	SNARE associated Golgi protein
4243	 73.57	0	5024472..5024978	+	168	153007122	-	Anae109_4285	-	response regulator receiver protein
4244	 72.97	0	5024985..5027522	-	845	153007123	-	Anae109_4286	-	RND efflux transporter
4245	 77.33	+1	5027645..5028319	-	224	153007124	-	Anae109_4287	-	metallophosphoesterase
4246	 76.06	0	5028316..5029071	-	251	153007125	-	Anae109_4288	-	phospholipid/glycerol acyltransferase
4247	 78.66	+1	5029068..5029784	-	238	153007126	-	Anae109_4289	-	phospholipid/glycerol acyltransferase
4248	 79.17	+1	5029781..5030908	-	375	153007127	-	Anae109_4290	-	phosphatidylinositol alpha-mannosyltransferase
4249	 70.57	0	5031071..5032375	-	434	153007128	-	Anae109_4291	-	inositol-3-phosphate synthase
4250	 71.76	0	5032455..5033102	+	215	153007129	-	Anae109_4292	-	hypothetical protein
4251	 77.37	+1	5033557..5034285	+	242	153007130	-	Anae109_4293	-	hypothetical protein
4252	 76.91	0	5034288..5035634	+	448	153007131	-	Anae109_4294	-	outer membrane efflux protein
4253	 74.23	0	5035635..5037035	+	466	153007132	-	Anae109_4295	-	RND family efflux transporter MFP subunit
4254	 73.94	0	5037039..5037767	+	242	153007133	-	Anae109_4296	-	ABC transporter related
4255	 71.73	0	5037764..5039026	+	420	153007134	-	Anae109_4297	-	hypothetical protein
4256	 71.54	0	5039023..5040252	+	409	153007135	-	Anae109_4298	-	hypothetical protein
4257	 71.01	0	5040267..5040956	+	229	153007136	-	Anae109_4299	-	signal peptidase I
4258	 68.05	-1	5041214..5041648	-	144	153007137	-	Anae109_4300	-	alkylhydroperoxidase
4259	 77.95	+1	5041919..5043478	-	519	153007138	-	Anae109_4301	-	ATP-dependent DNA ligase
4260	 74.71	0	5043587..5044456	+	289	153007139	-	Anae109_4302	-	silent information regulator protein Sir2
4261	 66.07	-1	5044486..5044818	-	110	153007140	-	Anae109_4303	-	hypothetical protein
4262	 79.60	+1	5044815..5045162	-	115	153007141	-	Anae109_4304	-	hypothetical protein
4263	 79.22	+1	5045249..5045710	-	153	153007142	-	Anae109_4305	-	hydrogenase maturation protease
4264	 74.48	0	5045714..5047210	-	498	153007143	-	Anae109_4306	-	nickel-dependent hydrogenase large subunit
4265	 78.32	+1	5047207..5048673	-	488	153007144	-	Anae109_4307	-	methyl-viologen-reducing hydrogenase delta subunit
4266	 79.44	+1	5048677..5050626	-	649	153007145	-	Anae109_4308	-	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
4267	 68.55	-1	5050644..5050961	-	105	153007146	-	Anae109_4309	-	hypothetical protein
4268	 70.15	0	5051044..5051502	-	152	153007147	-	Anae109_4310	-	putative PTS IIA-like nitrogen-regulatory protein PtsN
4269	 66.67	-1	5051671..5052228	-	185	153007148	-	Anae109_4311	-	sigma 54 modulation protein/ribosomal protein S30EA
4270	 65.94	-1	5052433..5053938	-	501	153007149	-	Anae109_4312	-	RNA polymerase, sigma 54 subunit, RpoN
4271	 74.07	0	5053935..5054690	-	251	153007150	-	Anae109_4313	-	ABC transporter related
4272	 76.11	0	5054687..5055247	-	186	153007151	-	Anae109_4314	-	OstA family protein
4273	 73.55	0	5055244..5055795	-	183	153007152	-	Anae109_4315	-	hypothetical protein
4274	 75.00	0	5056204..5056707	-	167	153007153	-	Anae109_4316	-	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
4275	 73.42	0	5056815..5057540	+	241	153007154	-	Anae109_4317	-	hypothetical protein
4276	 67.39	-1	5057537..5059204	-	555	153007155	-	Anae109_4318	-	CTP synthetase
4277	 75.24	0	5059221..5059955	-	244	153007156	-	Anae109_4319	-	3-deoxy-D-manno-octulosonate cytidylyltransferase
4278	 69.17	-1	5060093..5060731	-	212	153007157	-	Anae109_4320	-	hypothetical protein
4279	 74.74	0	5060809..5061861	+	350	153007158	-	Anae109_4321	-	RluA family pseudouridine synthase
4280	 77.41	+1	5061858..5062220	+	120	153007159	-	Anae109_4322	-	hypothetical protein
4281	 74.29	0	5062941..5064134	-	397	153007160	-	Anae109_4323	-	GntR family transcriptional regulator
4282	 75.29	0	5064184..5064786	-	200	153007161	-	Anae109_4324	-	phospholipid/glycerol acyltransferase
4283	 72.92	0	5064849..5065568	-	239	153007162	-	Anae109_4325	-	tRNA/rRNA methyltransferase (SpoU)
4284	 73.26	0	5065565..5066626	-	353	153007163	-	Anae109_4326	-	GTPase ObgE
4285	 67.05	-1	5066772..5067029	-	85	153007164	-	Anae109_4327	-	50S ribosomal protein L27
4286	 67.87	-1	5067062..5067478	-	138	153007165	-	Anae109_4328	-	50S ribosomal protein L21
4287	 70.60	0	5067579..5068061	+	160	153007166	-	Anae109_4329	-	hypothetical protein
4288	 77.89	+1	5068113..5068994	+	293	153007167	-	Anae109_4330	-	beta-lactamase domain-containing protein
4289	 70.79	0	5069034..5069591	-	185	153007168	-	Anae109_4331	-	hypothetical protein
4290	 73.33	0	5069785..5070249	-	154	153007169	-	Anae109_4332	-	hypothetical protein
4291	 75.67	0	5070305..5071204	-	299	153007170	-	Anae109_4333	-	K+ channel inward rectifier domain-containing protein
4292	 76.04	0	5071258..5072271	-	337	153007171	-	Anae109_4334	-	eIF-2B alpha/beta/delta-related uncharacterized protein
4293	 77.31	+1	5072268..5072483	-	71	153007172	-	Anae109_4335	-	hypothetical protein
4294	 71.83	0	5072564..5074015	-	483	153007173	-	Anae109_4336	-	aspartyl/glutamyl-tRNA amidotransferase subunit B
4295	 76.78	0	5074018..5074452	-	144	153007174	-	Anae109_4337	-	hypothetical protein
4296	 76.10	0	5074469..5075941	-	490	153007175	-	Anae109_4338	-	glutamyl-tRNA(Gln) amidotransferase, A subunit
4297	 73.26	0	5075938..5076225	-	95	153007176	-	Anae109_4339	-	glutamyl-tRNA(Gln) amidotransferase, C subunit
4298	 64.04	-2	5076235..5076576	-	113	153007177	-	Anae109_4340	-	hypothetical protein
73.23	MEAN

3.77	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.