IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter sp. Fw109-5



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 73.23 STD DEV: 3.77
Anaeromyxobacter sp. Fw109-5, complete genome - 1..5277990
4466 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
4085	 75.30	0	4829692..4831416	-	574	153006964	-	Anae109_4127	-	pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase
4086	 69.74	0	4831438..4834104	-	888	153006965	-	Anae109_4128	-	pyruvate dehydrogenase subunit E1
4087	 78.42	+1	4834346..4835332	+	328	153006966	-	Anae109_4129	-	alcohol dehydrogenase zinc-binding type 2
4088	 71.00	0	4835402..4835839	+	145	153006967	-	Anae109_4130	-	hypothetical protein
4089	 73.54	0	4835799..4836569	+	256	153006968	-	Anae109_4131	-	RES domain-containing protein
4090	 76.28	0	4836637..4837479	+	280	153006969	-	Anae109_4132	-	hypothetical protein
4091	 71.14	0	4837814..4838215	+	133	153006970	-	Anae109_4133	-	hypothetical protein
4092	 73.48	0	4838485..4838895	-	136	153006971	-	Anae109_4134	-	hypothetical protein
4093	 72.86	0	4839227..4840033	-	268	153006972	-	Anae109_4135	-	metallophosphoesterase
4094	 78.06	+1	4840455..4844543	-	1362	153006973	-	Anae109_4136	-	vault protein inter-alpha-trypsin subunit
4095	 74.07	0	4844761..4845246	+	161	153006974	-	Anae109_4137	-	hypothetical protein
4096	 71.91	0	4845421..4845744	+	107	153006975	-	Anae109_4138	-	transcriptional antiterminator, BglG
4097	 71.35	0	4846017..4846763	+	248	153006976	-	Anae109_4139	-	exodeoxyribonuclease III Xth
4098	 73.85	0	4846789..4847679	-	296	153006977	-	Anae109_4140	-	hypothetical protein
4099	 74.12	0	4847825..4848763	+	312	153006978	-	Anae109_4141	-	diguanylate cyclase
4100	 75.30	0	4848804..4850297	-	497	153006979	-	Anae109_4142	-	outer membrane efflux protein
4101	 75.47	0	4850452..4850928	-	158	153006980	-	Anae109_4143	-	MarR family transcriptional regulator
4102	 80.24	+1	4850989..4854363	-	1124	153006981	-	Anae109_4144	-	Zinc finger-domain-containing protein
4103	 72.28	0	4854493..4855347	+	284	153006982	-	Anae109_4145	-	phospholipid/glycerol acyltransferase
4104	 70.23	0	4855356..4856309	+	317	153006983	-	Anae109_4146	-	NAD-dependent epimerase/dehydratase
4105	 72.55	0	4856339..4856899	+	186	153006984	-	Anae109_4147	-	hypothetical protein
4106	 76.95	0	4856954..4857838	+	294	153006985	-	Anae109_4148	-	Hsp33 protein
4107	 76.32	0	4857835..4858590	+	251	153006986	-	Anae109_4149	-	phosphoribosyltransferase
4108	 76.41	0	4858625..4860574	+	649	153006987	-	Anae109_4150	-	selenocysteine-specific translation elongation factor
4109	 77.61	+1	4860571..4865130	+	1519	153006988	-	Anae109_4151	-	multi-sensor signal transduction histidine kinase
4110	 73.46	0	4865123..4866565	+	480	153006989	-	Anae109_4152	-	two component, sigma54 specific, Fis family transcriptional regulator
4111	 70.20	0	4866720..4867172	+	150	153006990	-	Anae109_4153	-	response regulator receiver protein
4112	 73.33	0	4867254..4868723	-	489	153006991	-	Anae109_4154	-	proton-translocating NADH-quinone oxidoreductase, chain N
4113	 69.72	0	4868725..4870329	-	534	153006992	-	Anae109_4155	-	proton-translocating NADH-quinone oxidoreductase, chain M
4114	 69.92	0	4870333..4872363	-	676	153006993	-	Anae109_4156	-	proton-translocating NADH-quinone oxidoreductase, chain L
4115	 75.43	0	4872444..4873880	+	478	153006994	-	Anae109_4157	-	selenocysteine synthase
4116	 73.18	0	4874520..4875686	+	388	153006995	-	Anae109_4158	-	HNH endonuclease
4117	 70.42	0	4875951..4876643	-	230	153006996	-	Anae109_4159	-	two component transcriptional regulator
4118	 71.15	0	4876653..4877588	-	311	153006997	-	Anae109_4160	-	histidine kinase
4119	 68.32	-1	4877780..4880137	-	785	153006998	-	Anae109_4161	-	hypothetical protein
4120	 71.96	0	4880635..4882806	-	723	153006999	-	Anae109_4162	-	multifunctional fatty acid oxidation complex subunit alpha
4121	 73.09	0	4882838..4884145	-	435	153007000	-	Anae109_4163	-	3-ketoacyl-CoA thiolase
4122	 73.96	0	4884317..4884796	+	159	153007001	-	Anae109_4164	-	hemerythrin HHE cation binding domain-containing protein
4123	 71.90	0	4884797..4885771	-	324	153007002	-	Anae109_4165	-	nuclease
4124	 72.07	0	4885843..4886841	+	332	153007003	-	Anae109_4166	-	ABC transporter related
4125	 73.69	0	4886863..4887702	-	279	153007004	-	Anae109_4167	-	SAM-dependent methyltransferase
4126	 78.79	+1	4887725..4888978	-	417	153007005	-	Anae109_4168	-	ribosomal small subunit Rsm22
4127	 75.03	0	4888991..4889935	-	314	153007006	-	Anae109_4169	-	ribonuclease Z
4128	 76.60	0	4890037..4890489	+	150	153007007	-	Anae109_4170	-	hypothetical protein
4129	 69.84	0	4890492..4891280	-	262	153007008	-	Anae109_4171	-	hypothetical protein
4130	 71.80	0	4891289..4892086	-	265	153007009	-	Anae109_4172	-	ABC transporter, inner membrane subunit
4131	 74.88	0	4892181..4892996	+	271	153007010	-	Anae109_4173	-	oxidoreductase FAD/NAD(P)-binding subunit
4132	 76.35	0	4893286..4896258	+	990	153007011	-	Anae109_4174	-	serine/threonine protein kinase
4133	 74.50	0	4896262..4896759	+	165	153007012	-	Anae109_4175	-	hypothetical protein
4134	 74.09	0	4896970..4898262	+	430	153007013	-	Anae109_4176	-	proteinase inhibitor I4 serpin
4135	 71.70	0	4898275..4898751	-	158	153007014	-	Anae109_4177	-	GCN5-related N-acetyltransferase
4136	 75.80	0	4898818..4899441	-	207	153007015	-	Anae109_4178	-	hypothetical protein
4137	 72.96	0	4899477..4900016	+	179	153007016	-	Anae109_4179	-	hypothetical protein
4138	 73.07	0	4900071..4902005	-	644	153007017	-	Anae109_4180	-	thimet oligopeptidase
4139	 72.04	0	4902134..4903213	-	359	153007018	-	Anae109_4181	-	glycerol-3-phosphate dehydrogenase (NAD(P)(+))
4140	 79.71	+1	4903297..4904385	-	362	153007019	-	Anae109_4182	-	monooxygenase FAD-binding
4141	 78.48	+1	4904382..4906142	-	586	153007020	-	Anae109_4183	-	AMP-dependent synthetase and ligase
4142	 75.27	0	4906139..4906417	-	92	153007021	-	Anae109_4184	-	hypothetical protein
4143	 74.53	0	4906421..4907488	-	355	153007022	-	Anae109_4185	-	3-oxoacyl-(ACP) synthase III
4144	 73.81	0	4907579..4909159	-	526	153007023	-	Anae109_4186	-	histidine kinase
4145	 71.44	0	4909255..4911936	+	893	153007024	-	Anae109_4187	-	ATPase
4146	 76.06	0	4912033..4913118	-	361	153007025	-	Anae109_4188	-	beta-lactamase domain-containing protein
4147	 69.09	-1	4913253..4913747	+	164	153007026	-	Anae109_4189	-	DoxX family protein
4148	 69.24	-1	4913817..4914905	-	362	153007027	-	Anae109_4190	-	aspartate-semialdehyde dehydrogenase
4149	 75.07	0	4915029..4915766	-	245	153007028	-	Anae109_4191	-	tRNA pseudouridine synthase A
4150	 74.36	0	4915787..4917034	+	415	153007029	-	Anae109_4192	-	hypothetical protein
4151	 77.53	+1	4917068..4918651	+	527	153007030	-	Anae109_4193	-	hypothetical protein
4152	 76.19	0	4918735..4919784	+	349	153007031	-	Anae109_4194	-	polyprenyl synthetase
4153	 75.39	0	4919913..4920989	-	358	153007032	-	Anae109_4195	-	permease YjgP/YjgQ family protein
4154	 71.30	0	4921157..4922278	+	373	153007033	-	Anae109_4196	-	NAD-dependent epimerase/dehydratase
4155	 79.57	+1	4922275..4923336	+	353	153007034	-	Anae109_4197	-	hypothetical protein
4156	 74.37	0	4923305..4924381	+	358	153007035	-	Anae109_4198	-	glycosyl transferase family protein
4157	 72.65	0	4924378..4926183	+	601	153007036	-	Anae109_4199	-	glycosyl transferase family protein
4158	 67.53	-1	4926266..4927072	+	268	153007037	-	Anae109_4200	-	band 7 protein
4159	 76.43	0	4927197..4928333	-	378	153007038	-	Anae109_4201	-	putative glycosyl hydrolase
4160	 76.67	0	4928349..4928708	-	119	153007039	-	Anae109_4202	-	hypothetical protein
4161	 71.83	0	4928753..4930282	+	509	153007040	-	Anae109_4203	-	UbiD family decarboxylase
4162	 74.93	0	4930279..4930980	+	233	153007041	-	Anae109_4204	-	ubiquinone/menaquinone biosynthesis methyltransferase
4163	 70.63	0	4930977..4931582	+	201	153007042	-	Anae109_4205	-	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
4164	 70.53	0	4931583..4932746	+	387	153007043	-	Anae109_4206	-	radical SAM domain-containing protein
4165	 72.36	0	4932761..4934638	+	625	153007044	-	Anae109_4207	-	radical SAM domain-containing protein
4166	 76.90	0	4934635..4935885	+	416	153007045	-	Anae109_4208	-	amidohydrolase
4167	 77.37	+1	4935882..4936787	+	301	153007046	-	Anae109_4209	-	4-hydroxybenzoate polyprenyltransferase, putative
4168	 74.65	0	4936795..4937370	+	191	153007047	-	Anae109_4210	-	regulatory protein, ArsR
4169	 74.17	0	4937383..4938594	-	403	153007048	-	Anae109_4211	-	PAS/PAC sensor signal transduction histidine kinase
4170	 79.85	+1	4938657..4940264	-	535	153007049	-	Anae109_4212	-	LigA
4171	 69.71	0	4940362..4941480	+	372	153007050	-	Anae109_4213	-	peptide chain release factor 1
4172	 75.76	0	4941623..4942480	+	285	153007051	-	Anae109_4214	-	HemK family modification methylase
4173	 74.31	0	4942579..4943847	+	422	153007052	-	Anae109_4215	-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase
4174	 72.40	0	4943844..4944506	+	220	153007053	-	Anae109_4216	-	ATP phosphoribosyltransferase
4175	 66.93	-1	4944625..4945008	+	127	153007054	-	Anae109_4217	-	hypothetical protein
4176	 72.70	0	4945014..4945709	-	231	153007055	-	Anae109_4218	-	oxidoreductase molybdopterin binding
4177	 71.98	0	4945861..4947252	-	463	153007056	-	Anae109_4219	-	phage integrase family protein
4178	 69.47	0	4947498..4947818	-	106	153007057	-	Anae109_4220	-	hypothetical protein
4179	 74.01	0	4947959..4948693	+	244	153007058	-	Anae109_4221	-	hypothetical protein
4180	 69.07	-1	4948674..4949255	-	193	153007059	-	Anae109_4222	-	hypothetical protein
4181	 64.42	-2	4949700..4952543	-	947	153007060	-	Anae109_4223	-	DNA methylase N-4/N-6 domain-containing protein
4182	 60.23	-2	4952604..4953815	+	403	153007061	-	Anae109_4224	-	hypothetical protein
4183	 72.61	0	4953896..4954534	-	212	153007062	-	Anae109_4225	-	MerR family transcriptional regulator
4184	 69.07	-1	4954574..4954906	-	110	153007063	-	Anae109_4226	-	DNA binding domain-containing protein
73.23	MEAN

3.77	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.