IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter sp. Fw109-5



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 73.23 STD DEV: 3.77
Anaeromyxobacter sp. Fw109-5, complete genome - 1..5277990
4466 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
4051	 68.46	-1	4788523..4790247	-	574	153006930	-	Anae109_4093	-	propionyl-CoA carboxylase
4052	 72.79	0	4790550..4793687	-	1045	153006931	-	Anae109_4094	-	CzcA family heavy metal efflux protein
4053	 76.93	0	4793699..4795276	-	525	153006932	-	Anae109_4095	-	RND family efflux transporter MFP subunit
4054	 79.76	+1	4795273..4796517	-	414	153006933	-	Anae109_4096	-	outer membrane efflux protein
4055	 78.77	+1	4796553..4797527	-	324	153006934	-	Anae109_4097	-	peptidase M56 BlaR1
4056	 70.80	0	4797524..4797958	-	144	153006935	-	Anae109_4098	-	CopY family transcriptional regulator
4057	 77.07	+1	4797974..4798588	-	204	153006936	-	Anae109_4099	-	ECF subfamily RNA polymerase sigma-24 factor
4058	 77.40	+1	4798739..4801096	+	785	153006937	-	Anae109_4100	-	heavy metal translocating P-type ATPase
4059	 76.14	0	4801130..4801699	-	189	153006938	-	Anae109_4101	-	methyltransferase type 11
4060	 74.18	0	4802139..4802990	+	283	153006939	-	Anae109_4102	-	hypothetical protein
4061	 70.61	0	4803008..4803235	+	75	153006940	-	Anae109_4103	-	FeoA family protein
4062	 70.09	0	4803232..4803465	+	77	153006941	-	Anae109_4104	-	FeoA family protein
4063	 70.95	0	4803462..4805678	+	738	153006942	-	Anae109_4105	-	ferrous iron transport protein B
4064	 74.79	0	4806037..4806972	-	311	153006943	-	Anae109_4106	-	polysulphide reductase NrfD
4065	 75.92	0	4806992..4808191	-	399	153006944	-	Anae109_4107	-	hypothetical protein
4066	 75.29	0	4808188..4808697	-	169	153006945	-	Anae109_4108	-	protein of unknown function DUF395, YeeE/YedE
4067	 72.59	0	4808706..4809245	-	179	153006946	-	Anae109_4109	-	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
4068	 73.60	0	4809242..4811476	-	744	153006947	-	Anae109_4110	-	molybdopterin oxidoreductase
4069	 70.96	0	4811523..4812779	-	418	153006948	-	Anae109_4111	-	membrane protein involved in aromatic hydrocarbon degradation
4070	 76.40	0	4813061..4814488	+	475	153006949	-	Anae109_4112	-	sigma-54 dependent trancsriptional regulator
4071	 73.19	0	4814570..4816009	-	479	153006950	-	Anae109_4113	-	thiamine pyrophosphate binding domain-containing protein
4072	 74.69	0	4816006..4817388	-	460	153006951	-	Anae109_4114	-	pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
4073	 78.01	+1	4817437..4817859	-	140	153006952	-	Anae109_4115	-	hypothetical protein
4074	 77.54	+1	4817933..4818622	+	229	153006953	-	Anae109_4116	-	LigA
4075	 66.18	-1	4818694..4818897	-	67	153006954	-	Anae109_4117	-	cold-shock DNA-binding domain-containing protein
4076	 78.40	+1	4819108..4819857	+	249	153006955	-	Anae109_4118	-	hypothetical protein
4077	 68.91	-1	4819956..4820357	+	133	153006956	-	Anae109_4119	-	hemerythrin-like metal-binding protein
4078	 71.76	0	4820539..4821657	+	372	153006957	-	Anae109_4120	-	radical SAM domain-containing protein
4079	 76.11	0	4822029..4822949	-	306	153006958	-	Anae109_4121	-	protein-L-isoaspartate O-methyltransferase
4080	 77.14	+1	4823638..4824573	+	311	153006959	-	Anae109_4122	-	ribose-phosphate pyrophosphokinase
4081	 70.24	0	4824898..4825233	+	111	153006960	-	Anae109_4123	-	regulatory protein LuxR
4082	 75.35	0	4825356..4826207	+	283	153006961	-	Anae109_4124	-	hypothetical protein
4083	 78.42	+1	4826108..4827307	-	399	153006962	-	Anae109_4125	-	cytochrome c biogenesis protein transmembrane region
4084	 75.77	0	4827453..4829549	-	698	153006963	-	Anae109_4126	-	peptidase S41
4085	 75.30	0	4829692..4831416	-	574	153006964	-	Anae109_4127	-	pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase
4086	 69.74	0	4831438..4834104	-	888	153006965	-	Anae109_4128	-	pyruvate dehydrogenase subunit E1
4087	 78.42	+1	4834346..4835332	+	328	153006966	-	Anae109_4129	-	alcohol dehydrogenase zinc-binding type 2
4088	 71.00	0	4835402..4835839	+	145	153006967	-	Anae109_4130	-	hypothetical protein
4089	 73.54	0	4835799..4836569	+	256	153006968	-	Anae109_4131	-	RES domain-containing protein
4090	 76.28	0	4836637..4837479	+	280	153006969	-	Anae109_4132	-	hypothetical protein
4091	 71.14	0	4837814..4838215	+	133	153006970	-	Anae109_4133	-	hypothetical protein
4092	 73.48	0	4838485..4838895	-	136	153006971	-	Anae109_4134	-	hypothetical protein
4093	 72.86	0	4839227..4840033	-	268	153006972	-	Anae109_4135	-	metallophosphoesterase
4094	 78.06	+1	4840455..4844543	-	1362	153006973	-	Anae109_4136	-	vault protein inter-alpha-trypsin subunit
4095	 74.07	0	4844761..4845246	+	161	153006974	-	Anae109_4137	-	hypothetical protein
4096	 71.91	0	4845421..4845744	+	107	153006975	-	Anae109_4138	-	transcriptional antiterminator, BglG
4097	 71.35	0	4846017..4846763	+	248	153006976	-	Anae109_4139	-	exodeoxyribonuclease III Xth
4098	 73.85	0	4846789..4847679	-	296	153006977	-	Anae109_4140	-	hypothetical protein
4099	 74.12	0	4847825..4848763	+	312	153006978	-	Anae109_4141	-	diguanylate cyclase
4100	 75.30	0	4848804..4850297	-	497	153006979	-	Anae109_4142	-	outer membrane efflux protein
4101	 75.47	0	4850452..4850928	-	158	153006980	-	Anae109_4143	-	MarR family transcriptional regulator
4102	 80.24	+1	4850989..4854363	-	1124	153006981	-	Anae109_4144	-	Zinc finger-domain-containing protein
4103	 72.28	0	4854493..4855347	+	284	153006982	-	Anae109_4145	-	phospholipid/glycerol acyltransferase
4104	 70.23	0	4855356..4856309	+	317	153006983	-	Anae109_4146	-	NAD-dependent epimerase/dehydratase
4105	 72.55	0	4856339..4856899	+	186	153006984	-	Anae109_4147	-	hypothetical protein
4106	 76.95	0	4856954..4857838	+	294	153006985	-	Anae109_4148	-	Hsp33 protein
4107	 76.32	0	4857835..4858590	+	251	153006986	-	Anae109_4149	-	phosphoribosyltransferase
4108	 76.41	0	4858625..4860574	+	649	153006987	-	Anae109_4150	-	selenocysteine-specific translation elongation factor
4109	 77.61	+1	4860571..4865130	+	1519	153006988	-	Anae109_4151	-	multi-sensor signal transduction histidine kinase
4110	 73.46	0	4865123..4866565	+	480	153006989	-	Anae109_4152	-	two component, sigma54 specific, Fis family transcriptional regulator
4111	 70.20	0	4866720..4867172	+	150	153006990	-	Anae109_4153	-	response regulator receiver protein
4112	 73.33	0	4867254..4868723	-	489	153006991	-	Anae109_4154	-	proton-translocating NADH-quinone oxidoreductase, chain N
4113	 69.72	0	4868725..4870329	-	534	153006992	-	Anae109_4155	-	proton-translocating NADH-quinone oxidoreductase, chain M
4114	 69.92	0	4870333..4872363	-	676	153006993	-	Anae109_4156	-	proton-translocating NADH-quinone oxidoreductase, chain L
4115	 75.43	0	4872444..4873880	+	478	153006994	-	Anae109_4157	-	selenocysteine synthase
4116	 73.18	0	4874520..4875686	+	388	153006995	-	Anae109_4158	-	HNH endonuclease
4117	 70.42	0	4875951..4876643	-	230	153006996	-	Anae109_4159	-	two component transcriptional regulator
4118	 71.15	0	4876653..4877588	-	311	153006997	-	Anae109_4160	-	histidine kinase
4119	 68.32	-1	4877780..4880137	-	785	153006998	-	Anae109_4161	-	hypothetical protein
4120	 71.96	0	4880635..4882806	-	723	153006999	-	Anae109_4162	-	multifunctional fatty acid oxidation complex subunit alpha
4121	 73.09	0	4882838..4884145	-	435	153007000	-	Anae109_4163	-	3-ketoacyl-CoA thiolase
4122	 73.96	0	4884317..4884796	+	159	153007001	-	Anae109_4164	-	hemerythrin HHE cation binding domain-containing protein
4123	 71.90	0	4884797..4885771	-	324	153007002	-	Anae109_4165	-	nuclease
4124	 72.07	0	4885843..4886841	+	332	153007003	-	Anae109_4166	-	ABC transporter related
4125	 73.69	0	4886863..4887702	-	279	153007004	-	Anae109_4167	-	SAM-dependent methyltransferase
4126	 78.79	+1	4887725..4888978	-	417	153007005	-	Anae109_4168	-	ribosomal small subunit Rsm22
4127	 75.03	0	4888991..4889935	-	314	153007006	-	Anae109_4169	-	ribonuclease Z
4128	 76.60	0	4890037..4890489	+	150	153007007	-	Anae109_4170	-	hypothetical protein
4129	 69.84	0	4890492..4891280	-	262	153007008	-	Anae109_4171	-	hypothetical protein
4130	 71.80	0	4891289..4892086	-	265	153007009	-	Anae109_4172	-	ABC transporter, inner membrane subunit
4131	 74.88	0	4892181..4892996	+	271	153007010	-	Anae109_4173	-	oxidoreductase FAD/NAD(P)-binding subunit
4132	 76.35	0	4893286..4896258	+	990	153007011	-	Anae109_4174	-	serine/threonine protein kinase
4133	 74.50	0	4896262..4896759	+	165	153007012	-	Anae109_4175	-	hypothetical protein
4134	 74.09	0	4896970..4898262	+	430	153007013	-	Anae109_4176	-	proteinase inhibitor I4 serpin
4135	 71.70	0	4898275..4898751	-	158	153007014	-	Anae109_4177	-	GCN5-related N-acetyltransferase
4136	 75.80	0	4898818..4899441	-	207	153007015	-	Anae109_4178	-	hypothetical protein
4137	 72.96	0	4899477..4900016	+	179	153007016	-	Anae109_4179	-	hypothetical protein
4138	 73.07	0	4900071..4902005	-	644	153007017	-	Anae109_4180	-	thimet oligopeptidase
4139	 72.04	0	4902134..4903213	-	359	153007018	-	Anae109_4181	-	glycerol-3-phosphate dehydrogenase (NAD(P)(+))
4140	 79.71	+1	4903297..4904385	-	362	153007019	-	Anae109_4182	-	monooxygenase FAD-binding
4141	 78.48	+1	4904382..4906142	-	586	153007020	-	Anae109_4183	-	AMP-dependent synthetase and ligase
4142	 75.27	0	4906139..4906417	-	92	153007021	-	Anae109_4184	-	hypothetical protein
4143	 74.53	0	4906421..4907488	-	355	153007022	-	Anae109_4185	-	3-oxoacyl-(ACP) synthase III
4144	 73.81	0	4907579..4909159	-	526	153007023	-	Anae109_4186	-	histidine kinase
4145	 71.44	0	4909255..4911936	+	893	153007024	-	Anae109_4187	-	ATPase
4146	 76.06	0	4912033..4913118	-	361	153007025	-	Anae109_4188	-	beta-lactamase domain-containing protein
4147	 69.09	-1	4913253..4913747	+	164	153007026	-	Anae109_4189	-	DoxX family protein
4148	 69.24	-1	4913817..4914905	-	362	153007027	-	Anae109_4190	-	aspartate-semialdehyde dehydrogenase
4149	 75.07	0	4915029..4915766	-	245	153007028	-	Anae109_4191	-	tRNA pseudouridine synthase A
4150	 74.36	0	4915787..4917034	+	415	153007029	-	Anae109_4192	-	hypothetical protein
73.23	MEAN

3.77	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.