IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter sp. Fw109-5



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 73.23 STD DEV: 3.77
Anaeromyxobacter sp. Fw109-5, complete genome - 1..5277990
4466 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
4001	 67.71	-1	4731983..4732174	-	63	153006880	-	Anae109_4043	-	hypothetical protein
4002	 74.79	0	4732302..4733507	+	401	153006881	-	Anae109_4044	-	hypothetical protein
4003	 73.60	0	4733435..4733968	-	177	153006882	-	Anae109_4045	-	hypothetical protein
4004	 71.91	0	4734145..4735365	-	406	153006883	-	Anae109_4046	-	phospholipase D/transphosphatidylase
4005	 77.52	+1	4735554..4736447	+	297	153006884	-	Anae109_4047	-	urease accessory protein UreD
4006	 74.94	0	4736463..4737236	+	257	153006885	-	Anae109_4048	-	bifunctional urease subunit gamma/beta
4007	 73.25	0	4737238..4738953	+	571	153006886	-	Anae109_4049	-	urease subunit alpha
4008	 79.60	+1	4738964..4739620	+	218	153006887	-	Anae109_4050	-	hypothetical protein
4009	 74.12	0	4739623..4740333	+	236	153006888	-	Anae109_4051	-	urease accessory protein UreG
4010	 73.85	0	4740407..4741060	+	217	153006889	-	Anae109_4052	-	DNA-3-methyladenine glycosylase I
4011	 70.60	0	4741113..4741595	-	160	153006890	-	Anae109_4053	-	glyoxalase/bleomycin resistance protein/dioxygenase
4012	 73.61	0	4741878..4743533	+	551	153006891	-	Anae109_4054	-	histidine kinase
4013	 74.09	0	4743562..4744383	+	273	153006892	-	Anae109_4055	-	hypothetical protein
4014	 72.96	0	4744421..4744960	+	179	153006893	-	Anae109_4056	-	hypothetical protein
4015	 75.61	0	4745102..4747897	+	931	153006894	-	Anae109_4057	-	non-specific serine/threonine protein kinase
4016	 75.78	0	4747956..4748789	+	277	153006895	-	Anae109_4058	-	zinc finger SWIM domain-containing protein
4017	 77.18	+1	4748957..4749907	+	316	153006896	-	Anae109_4059	-	NAD-dependent epimerase/dehydratase
4018	 76.85	0	4749861..4750832	-	323	153006897	-	Anae109_4060	-	ECF subfamily RNA polymerase sigma-24 factor
4019	 69.74	0	4751033..4753342	+	769	153006898	-	Anae109_4061	-	malate synthase
4020	 68.53	-1	4754024..4755688	-	554	153006899	-	Anae109_4062	-	putative ABC transporter ATP-binding protein
4021	 73.23	0	4755831..4757339	-	502	153006900	-	Anae109_4063	-	putative phenylacetate-CoA ligase
4022	 77.97	+1	4757361..4759952	-	863	153006901	-	Anae109_4064	-	protein kinase
4023	 72.80	0	4760129..4761025	-	298	153006902	-	Anae109_4065	-	NmrA family protein
4024	 67.68	-1	4761223..4761420	+	65	153006903	-	Anae109_4066	-	hypothetical protein
4025	 73.19	0	4761523..4761936	-	137	153006904	-	Anae109_4067	-	UspA domain-containing protein
4026	 68.78	-1	4762170..4762406	-	78	153006905	-	Anae109_4068	-	hypothetical protein
4027	 74.03	0	4762638..4763126	-	162	153006906	-	Anae109_4069	-	UspA domain-containing protein
4028	 72.48	0	4763293..4763808	-	171	153006907	-	Anae109_4070	-	superoxide dismutase copper/zinc binding
4029	 76.79	0	4763945..4764418	+	157	153006908	-	Anae109_4071	-	MarR family transcriptional regulator
4030	 77.24	+1	4764508..4765254	+	248	153006909	-	Anae109_4072	-	hypothetical protein
4031	 66.67	-1	4765417..4765893	+	158	153006910	-	Anae109_4073	-	bacterioferritin
4032	 76.90	0	4765959..4767326	-	455	153006911	-	Anae109_4074	-	glycoside hydrolase family 3 protein
4033	 72.80	0	4767366..4768082	+	238	153006912	-	Anae109_4075	-	RNA polymerase, sigma 32 subunit, RpoH
4034	 74.47	0	4768125..4768598	+	157	153006913	-	Anae109_4076	-	helix-turn-helix domain-containing protein
4035	 72.98	0	4768726..4769232	+	168	153006914	-	Anae109_4077	-	hypothetical protein
4036	 77.62	+1	4769241..4770737	-	498	153006915	-	Anae109_4078	-	membrane protein-like protein
4037	 74.40	0	4770742..4772706	-	654	153006916	-	Anae109_4079	-	squalene-hopene cyclase
4038	 73.20	0	4772703..4773635	-	310	153006917	-	Anae109_4080	-	squalene/phytoene synthase
4039	 75.70	0	4773623..4775338	-	571	153006918	-	Anae109_4081	-	amine oxidase
4040	 75.12	0	4775335..4776387	-	350	153006919	-	Anae109_4082	-	isopentenyl pyrophosphate isomerase
4041	 71.91	0	4776399..4777409	-	336	153006920	-	Anae109_4083	-	radical SAM domain-containing protein
4042	 75.37	0	4777394..4778461	-	355	153006921	-	Anae109_4084	-	NAD-dependent epimerase/dehydratase
4043	 75.46	0	4779112..4780305	+	397	153006922	-	Anae109_4085	-	cystathionine beta-lyase
4044	 73.36	0	4780330..4781793	-	487	153006923	-	Anae109_4086	-	putative ribonuclease BN
4045	 72.60	0	4781981..4782418	+	145	153006924	-	Anae109_4087	-	UspA domain-containing protein
4046	 73.31	0	4782839..4783621	+	260	153006925	-	Anae109_4088	-	hypothetical protein
4047	 76.04	0	4783641..4784621	-	326	153006926	-	Anae109_4089	-	lipid A biosynthesis acyltransferase
4048	 74.05	0	4784621..4785013	-	130	153006927	-	Anae109_4090	-	hypothetical protein
4049	 73.63	0	4785108..4785380	-	90	153006928	-	Anae109_4091	-	hypothetical protein
4050	 68.14	-1	4785495..4788473	-	992	153006929	-	Anae109_4092	-	biotin/lipoyl attachment domain-containing protein
4051	 68.46	-1	4788523..4790247	-	574	153006930	-	Anae109_4093	-	propionyl-CoA carboxylase
4052	 72.79	0	4790550..4793687	-	1045	153006931	-	Anae109_4094	-	CzcA family heavy metal efflux protein
4053	 76.93	0	4793699..4795276	-	525	153006932	-	Anae109_4095	-	RND family efflux transporter MFP subunit
4054	 79.76	+1	4795273..4796517	-	414	153006933	-	Anae109_4096	-	outer membrane efflux protein
4055	 78.77	+1	4796553..4797527	-	324	153006934	-	Anae109_4097	-	peptidase M56 BlaR1
4056	 70.80	0	4797524..4797958	-	144	153006935	-	Anae109_4098	-	CopY family transcriptional regulator
4057	 77.07	+1	4797974..4798588	-	204	153006936	-	Anae109_4099	-	ECF subfamily RNA polymerase sigma-24 factor
4058	 77.40	+1	4798739..4801096	+	785	153006937	-	Anae109_4100	-	heavy metal translocating P-type ATPase
4059	 76.14	0	4801130..4801699	-	189	153006938	-	Anae109_4101	-	methyltransferase type 11
4060	 74.18	0	4802139..4802990	+	283	153006939	-	Anae109_4102	-	hypothetical protein
4061	 70.61	0	4803008..4803235	+	75	153006940	-	Anae109_4103	-	FeoA family protein
4062	 70.09	0	4803232..4803465	+	77	153006941	-	Anae109_4104	-	FeoA family protein
4063	 70.95	0	4803462..4805678	+	738	153006942	-	Anae109_4105	-	ferrous iron transport protein B
4064	 74.79	0	4806037..4806972	-	311	153006943	-	Anae109_4106	-	polysulphide reductase NrfD
4065	 75.92	0	4806992..4808191	-	399	153006944	-	Anae109_4107	-	hypothetical protein
4066	 75.29	0	4808188..4808697	-	169	153006945	-	Anae109_4108	-	protein of unknown function DUF395, YeeE/YedE
4067	 72.59	0	4808706..4809245	-	179	153006946	-	Anae109_4109	-	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
4068	 73.60	0	4809242..4811476	-	744	153006947	-	Anae109_4110	-	molybdopterin oxidoreductase
4069	 70.96	0	4811523..4812779	-	418	153006948	-	Anae109_4111	-	membrane protein involved in aromatic hydrocarbon degradation
4070	 76.40	0	4813061..4814488	+	475	153006949	-	Anae109_4112	-	sigma-54 dependent trancsriptional regulator
4071	 73.19	0	4814570..4816009	-	479	153006950	-	Anae109_4113	-	thiamine pyrophosphate binding domain-containing protein
4072	 74.69	0	4816006..4817388	-	460	153006951	-	Anae109_4114	-	pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
4073	 78.01	+1	4817437..4817859	-	140	153006952	-	Anae109_4115	-	hypothetical protein
4074	 77.54	+1	4817933..4818622	+	229	153006953	-	Anae109_4116	-	LigA
4075	 66.18	-1	4818694..4818897	-	67	153006954	-	Anae109_4117	-	cold-shock DNA-binding domain-containing protein
4076	 78.40	+1	4819108..4819857	+	249	153006955	-	Anae109_4118	-	hypothetical protein
4077	 68.91	-1	4819956..4820357	+	133	153006956	-	Anae109_4119	-	hemerythrin-like metal-binding protein
4078	 71.76	0	4820539..4821657	+	372	153006957	-	Anae109_4120	-	radical SAM domain-containing protein
4079	 76.11	0	4822029..4822949	-	306	153006958	-	Anae109_4121	-	protein-L-isoaspartate O-methyltransferase
4080	 77.14	+1	4823638..4824573	+	311	153006959	-	Anae109_4122	-	ribose-phosphate pyrophosphokinase
4081	 70.24	0	4824898..4825233	+	111	153006960	-	Anae109_4123	-	regulatory protein LuxR
4082	 75.35	0	4825356..4826207	+	283	153006961	-	Anae109_4124	-	hypothetical protein
4083	 78.42	+1	4826108..4827307	-	399	153006962	-	Anae109_4125	-	cytochrome c biogenesis protein transmembrane region
4084	 75.77	0	4827453..4829549	-	698	153006963	-	Anae109_4126	-	peptidase S41
4085	 75.30	0	4829692..4831416	-	574	153006964	-	Anae109_4127	-	pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase
4086	 69.74	0	4831438..4834104	-	888	153006965	-	Anae109_4128	-	pyruvate dehydrogenase subunit E1
4087	 78.42	+1	4834346..4835332	+	328	153006966	-	Anae109_4129	-	alcohol dehydrogenase zinc-binding type 2
4088	 71.00	0	4835402..4835839	+	145	153006967	-	Anae109_4130	-	hypothetical protein
4089	 73.54	0	4835799..4836569	+	256	153006968	-	Anae109_4131	-	RES domain-containing protein
4090	 76.28	0	4836637..4837479	+	280	153006969	-	Anae109_4132	-	hypothetical protein
4091	 71.14	0	4837814..4838215	+	133	153006970	-	Anae109_4133	-	hypothetical protein
4092	 73.48	0	4838485..4838895	-	136	153006971	-	Anae109_4134	-	hypothetical protein
4093	 72.86	0	4839227..4840033	-	268	153006972	-	Anae109_4135	-	metallophosphoesterase
4094	 78.06	+1	4840455..4844543	-	1362	153006973	-	Anae109_4136	-	vault protein inter-alpha-trypsin subunit
4095	 74.07	0	4844761..4845246	+	161	153006974	-	Anae109_4137	-	hypothetical protein
4096	 71.91	0	4845421..4845744	+	107	153006975	-	Anae109_4138	-	transcriptional antiterminator, BglG
4097	 71.35	0	4846017..4846763	+	248	153006976	-	Anae109_4139	-	exodeoxyribonuclease III Xth
4098	 73.85	0	4846789..4847679	-	296	153006977	-	Anae109_4140	-	hypothetical protein
4099	 74.12	0	4847825..4848763	+	312	153006978	-	Anae109_4141	-	diguanylate cyclase
4100	 75.30	0	4848804..4850297	-	497	153006979	-	Anae109_4142	-	outer membrane efflux protein
73.23	MEAN

3.77	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.