IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter sp. Fw109-5



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 73.23 STD DEV: 3.77
Anaeromyxobacter sp. Fw109-5, complete genome - 1..5277990
4466 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3953	 57.23	-2	4672854..4673330	-	158	153006832	-	Anae109_3995	-	hypothetical protein
3954	 59.69	-2	4673333..4673920	-	195	153006833	-	Anae109_3996	-	ExsB family protein
3955	 62.19	-2	4673917..4674609	-	230	153006834	-	Anae109_3997	-	HhH-GPD family protein
3956	 59.99	-2	4674606..4676042	-	478	153006835	-	Anae109_3998	-	hypothetical protein
3957	 69.26	-1	4676520..4678913	-	797	153006836	-	Anae109_3999	-	TIR protein
3958	 67.78	-1	4678934..4680466	-	510	153006837	-	Anae109_4000	-	metallophosphoesterase
3959	 60.82	-2	4680616..4681197	+	193	153006838	-	Anae109_4001	-	hypothetical protein
3960	 71.01	0	4681355..4681768	-	137	153006839	-	Anae109_4002	-	hypothetical protein
3961	 64.03	-2	4682089..4682922	+	277	153006840	-	Anae109_4003	-	hypothetical protein
3962	 68.45	-1	4683219..4683386	-	55	153006841	-	Anae109_4004	-	hypothetical protein
3963	 64.47	-2	4683645..4683917	-	90	153006842	-	Anae109_4005	-	hypothetical protein
3964	 66.51	-1	4683929..4684552	-	207	153006843	-	Anae109_4006	-	hypothetical protein
3965	 58.69	-2	4685809..4686159	-	116	153006844	-	Anae109_4007	-	hypothetical protein
3966	 58.47	-2	4686983..4687165	+	60	153006845	-	Anae109_4008	-	hypothetical protein
3967	 68.21	-1	4687149..4687343	+	64	153006846	-	Anae109_4009	-	hypothetical protein
3968	 76.35	0	4687375..4690173	+	932	153006847	-	Anae109_4010	-	hypothetical protein
3969	 74.51	0	4690170..4693421	+	1083	153006848	-	Anae109_4011	-	UvrD/REP helicase
3970	 72.20	0	4693569..4695212	-	547	153006849	-	Anae109_4012	-	LigA
3971	 74.48	0	4695233..4695859	+	208	153006850	-	Anae109_4013	-	hypothetical protein
3972	 66.90	-1	4695922..4696356	+	144	153006851	-	Anae109_4014	-	hypothetical protein
3973	 74.46	0	4696360..4697898	+	512	153006852	-	Anae109_4015	-	transcriptional regulator protein-like protein
3974	 73.77	0	4697895..4698866	+	323	153006853	-	Anae109_4016	-	transcriptional regulator-like protein
3975	 70.72	0	4698897..4699982	+	361	153006854	-	Anae109_4017	-	LigA
3976	 70.79	0	4700517..4702892	-	791	153006855	-	Anae109_4018	-	LigA
3977	 70.83	0	4703033..4703896	+	287	153006856	-	Anae109_4019	-	hypothetical protein
3978	 73.16	0	4704684..4705022	+	112	153006857	-	Anae109_4020	-	hypothetical protein
3979	 72.13	0	4705013..4705378	+	121	153006858	-	Anae109_4021	-	dual specificity protein phosphatase
3980	 69.68	0	4705426..4705857	+	143	153006859	-	Anae109_4022	-	metal dependent phosphohydrolase
3981	 70.73	0	4705938..4706429	+	163	153006860	-	Anae109_4023	-	hypothetical protein
3982	 70.90	0	4706426..4706968	+	180	153006861	-	Anae109_4024	-	hypothetical protein
3983	 70.33	0	4707168..4707713	+	181	153006862	-	Anae109_4025	-	SecC motif-containing protein
3984	 74.45	0	4708165..4716411	+	2748	153006863	-	Anae109_4026	-	glycosyltransferase 36
3985	 72.82	0	4716408..4716602	+	64	153006864	-	Anae109_4027	-	hypothetical protein
3986	 73.92	0	4716678..4717628	-	316	153006865	-	Anae109_4028	-	hypothetical protein
3987	 70.71	0	4717886..4718602	-	238	153006866	-	Anae109_4029	-	exonuclease RNase T and DNA polymerase III
3988	 72.07	0	4718614..4720539	-	641	153006867	-	Anae109_4030	-	CBS domain-containing protein
3989	 71.38	0	4720687..4722426	+	579	153006868	-	Anae109_4031	-	putative PAS/PAC sensor protein
3990	 76.01	0	4722482..4723936	-	484	153006869	-	Anae109_4032	-	hypothetical protein
3991	 73.02	0	4724090..4725427	-	445	153006870	-	Anae109_4033	-	sodium/hydrogen exchanger
3992	 68.65	-1	4725524..4725826	-	100	153006871	-	Anae109_4034	-	antibiotic biosynthesis monooxygenase
3993	 72.12	0	4725992..4726816	+	274	153006872	-	Anae109_4035	-	ROK family protein
3994	 64.75	-2	4726903..4727319	-	138	153006873	-	Anae109_4036	-	glyoxalase/bleomycin resistance protein/dioxygenase
3995	 75.86	0	4727443..4728432	-	329	153006874	-	Anae109_4037	-	RNA polymerase factor sigma-70
3996	 73.32	0	4728522..4729619	+	365	153006875	-	Anae109_4038	-	ATP-dependent DNA ligase
3997	 72.06	0	4729818..4730447	-	209	153006876	-	Anae109_4039	-	methyltransferase type 12
3998	 68.28	-1	4730567..4731001	-	144	153006877	-	Anae109_4040	-	thioredoxin domain-containing protein
3999	 71.57	0	4731110..4731598	-	162	153006878	-	Anae109_4041	-	hypothetical protein
4000	 65.20	-2	4731669..4731872	+	67	153006879	-	Anae109_4042	-	cold-shock DNA-binding domain-containing protein
4001	 67.71	-1	4731983..4732174	-	63	153006880	-	Anae109_4043	-	hypothetical protein
4002	 74.79	0	4732302..4733507	+	401	153006881	-	Anae109_4044	-	hypothetical protein
4003	 73.60	0	4733435..4733968	-	177	153006882	-	Anae109_4045	-	hypothetical protein
4004	 71.91	0	4734145..4735365	-	406	153006883	-	Anae109_4046	-	phospholipase D/transphosphatidylase
4005	 77.52	+1	4735554..4736447	+	297	153006884	-	Anae109_4047	-	urease accessory protein UreD
4006	 74.94	0	4736463..4737236	+	257	153006885	-	Anae109_4048	-	bifunctional urease subunit gamma/beta
4007	 73.25	0	4737238..4738953	+	571	153006886	-	Anae109_4049	-	urease subunit alpha
4008	 79.60	+1	4738964..4739620	+	218	153006887	-	Anae109_4050	-	hypothetical protein
4009	 74.12	0	4739623..4740333	+	236	153006888	-	Anae109_4051	-	urease accessory protein UreG
4010	 73.85	0	4740407..4741060	+	217	153006889	-	Anae109_4052	-	DNA-3-methyladenine glycosylase I
4011	 70.60	0	4741113..4741595	-	160	153006890	-	Anae109_4053	-	glyoxalase/bleomycin resistance protein/dioxygenase
4012	 73.61	0	4741878..4743533	+	551	153006891	-	Anae109_4054	-	histidine kinase
4013	 74.09	0	4743562..4744383	+	273	153006892	-	Anae109_4055	-	hypothetical protein
4014	 72.96	0	4744421..4744960	+	179	153006893	-	Anae109_4056	-	hypothetical protein
4015	 75.61	0	4745102..4747897	+	931	153006894	-	Anae109_4057	-	non-specific serine/threonine protein kinase
4016	 75.78	0	4747956..4748789	+	277	153006895	-	Anae109_4058	-	zinc finger SWIM domain-containing protein
4017	 77.18	+1	4748957..4749907	+	316	153006896	-	Anae109_4059	-	NAD-dependent epimerase/dehydratase
4018	 76.85	0	4749861..4750832	-	323	153006897	-	Anae109_4060	-	ECF subfamily RNA polymerase sigma-24 factor
4019	 69.74	0	4751033..4753342	+	769	153006898	-	Anae109_4061	-	malate synthase
4020	 68.53	-1	4754024..4755688	-	554	153006899	-	Anae109_4062	-	putative ABC transporter ATP-binding protein
4021	 73.23	0	4755831..4757339	-	502	153006900	-	Anae109_4063	-	putative phenylacetate-CoA ligase
4022	 77.97	+1	4757361..4759952	-	863	153006901	-	Anae109_4064	-	protein kinase
4023	 72.80	0	4760129..4761025	-	298	153006902	-	Anae109_4065	-	NmrA family protein
4024	 67.68	-1	4761223..4761420	+	65	153006903	-	Anae109_4066	-	hypothetical protein
4025	 73.19	0	4761523..4761936	-	137	153006904	-	Anae109_4067	-	UspA domain-containing protein
4026	 68.78	-1	4762170..4762406	-	78	153006905	-	Anae109_4068	-	hypothetical protein
4027	 74.03	0	4762638..4763126	-	162	153006906	-	Anae109_4069	-	UspA domain-containing protein
4028	 72.48	0	4763293..4763808	-	171	153006907	-	Anae109_4070	-	superoxide dismutase copper/zinc binding
4029	 76.79	0	4763945..4764418	+	157	153006908	-	Anae109_4071	-	MarR family transcriptional regulator
4030	 77.24	+1	4764508..4765254	+	248	153006909	-	Anae109_4072	-	hypothetical protein
4031	 66.67	-1	4765417..4765893	+	158	153006910	-	Anae109_4073	-	bacterioferritin
4032	 76.90	0	4765959..4767326	-	455	153006911	-	Anae109_4074	-	glycoside hydrolase family 3 protein
4033	 72.80	0	4767366..4768082	+	238	153006912	-	Anae109_4075	-	RNA polymerase, sigma 32 subunit, RpoH
4034	 74.47	0	4768125..4768598	+	157	153006913	-	Anae109_4076	-	helix-turn-helix domain-containing protein
4035	 72.98	0	4768726..4769232	+	168	153006914	-	Anae109_4077	-	hypothetical protein
4036	 77.62	+1	4769241..4770737	-	498	153006915	-	Anae109_4078	-	membrane protein-like protein
4037	 74.40	0	4770742..4772706	-	654	153006916	-	Anae109_4079	-	squalene-hopene cyclase
4038	 73.20	0	4772703..4773635	-	310	153006917	-	Anae109_4080	-	squalene/phytoene synthase
4039	 75.70	0	4773623..4775338	-	571	153006918	-	Anae109_4081	-	amine oxidase
4040	 75.12	0	4775335..4776387	-	350	153006919	-	Anae109_4082	-	isopentenyl pyrophosphate isomerase
4041	 71.91	0	4776399..4777409	-	336	153006920	-	Anae109_4083	-	radical SAM domain-containing protein
4042	 75.37	0	4777394..4778461	-	355	153006921	-	Anae109_4084	-	NAD-dependent epimerase/dehydratase
4043	 75.46	0	4779112..4780305	+	397	153006922	-	Anae109_4085	-	cystathionine beta-lyase
4044	 73.36	0	4780330..4781793	-	487	153006923	-	Anae109_4086	-	putative ribonuclease BN
4045	 72.60	0	4781981..4782418	+	145	153006924	-	Anae109_4087	-	UspA domain-containing protein
4046	 73.31	0	4782839..4783621	+	260	153006925	-	Anae109_4088	-	hypothetical protein
4047	 76.04	0	4783641..4784621	-	326	153006926	-	Anae109_4089	-	lipid A biosynthesis acyltransferase
4048	 74.05	0	4784621..4785013	-	130	153006927	-	Anae109_4090	-	hypothetical protein
4049	 73.63	0	4785108..4785380	-	90	153006928	-	Anae109_4091	-	hypothetical protein
4050	 68.14	-1	4785495..4788473	-	992	153006929	-	Anae109_4092	-	biotin/lipoyl attachment domain-containing protein
4051	 68.46	-1	4788523..4790247	-	574	153006930	-	Anae109_4093	-	propionyl-CoA carboxylase
4052	 72.79	0	4790550..4793687	-	1045	153006931	-	Anae109_4094	-	CzcA family heavy metal efflux protein
73.23	MEAN

3.77	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.