IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter sp. Fw109-5



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 73.23 STD DEV: 3.77
Anaeromyxobacter sp. Fw109-5, complete genome - 1..5277990
4466 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3813	 75.62	0	4498073..4499245	-	390	153006692	-	Anae109_3854	-	tRNA synthetase class II (D K and N)
3814	 80.20	+1	4499305..4500117	+	270	153006693	-	Anae109_3855	-	alpha/beta hydrolase fold
3815	 80.00	+1	4500108..4500902	+	264	153006694	-	Anae109_3856	-	methyltransferase type 11
3816	 70.09	0	4500899..4501336	-	145	153006695	-	Anae109_3857	-	putative PAS/PAC sensor protein
3817	 72.24	0	4501717..4503492	+	591	153006696	-	Anae109_3858	-	protein kinase
3818	 79.25	+1	4503489..4504076	+	195	153006697	-	Anae109_3859	-	FHA domain-containing protein
3819	 76.59	0	4504063..4504848	-	261	153006698	-	Anae109_3860	-	enoyl-CoA hydratase/isomerase
3820	 69.95	0	4504852..4505064	-	70	153006699	-	Anae109_3861	-	biotin/lipoyl attachment domain-containing protein
3821	 74.77	0	4505257..4505799	-	180	153006700	-	Anae109_3862	-	response regulator receiver protein
3822	 75.59	0	4505962..4508775	-	937	153006701	-	Anae109_3863	-	ATPase, P-type (transporting), HAD superfamily, subfamily IC
3823	 75.19	0	4508954..4509727	+	257	153006702	-	Anae109_3864	-	short-chain dehydrogenase/reductase SDR
3824	 70.71	0	4509813..4511171	+	452	153006703	-	Anae109_3865	-	tryptophan synthase subunit beta
3825	 77.74	+1	4511222..4512811	+	529	153006704	-	Anae109_3866	-	sodium/hydrogen exchanger
3826	 75.97	0	4512847..4514136	+	429	153006705	-	Anae109_3867	-	sodium/hydrogen exchanger
3827	 67.39	-1	4514286..4515248	+	320	153006706	-	Anae109_3868	-	ABC nitrate/sulfonate/bicarbonate transporter, periplasmic ligand binding protein
3828	 69.82	0	4515245..4516069	+	274	153006707	-	Anae109_3869	-	binding-protein-dependent transport systems inner membrane component
3829	 73.14	0	4516066..4516884	+	272	153006708	-	Anae109_3870	-	ABC transporter related
3830	 60.48	-2	4516970..4517341	-	123	153006709	-	Anae109_3871	-	hypothetical protein
3831	 69.29	-1	4517939..4518892	-	317	153006710	-	Anae109_3872	-	hypothetical protein
3832	 70.44	0	4519128..4519949	-	273	153006711	-	Anae109_3873	-	short chain dehydrogenase
3833	 68.95	-1	4520452..4520889	+	145	153006712	-	Anae109_3874	-	hypothetical protein
3834	 71.29	0	4520919..4521221	+	100	153006713	-	Anae109_3875	-	Sulfate transporter/antisigma-factor antagonist STAS
3835	 74.71	0	4521218..4522150	+	310	153006714	-	Anae109_3876	-	S-adenosyl-methyltransferase MraW
3836	 78.46	+1	4522147..4522680	+	177	153006715	-	Anae109_3877	-	hypothetical protein
3837	 75.50	0	4522684..4524699	+	671	153006716	-	Anae109_3878	-	peptidoglycan glycosyltransferase
3838	 76.76	0	4524761..4526365	+	534	153006717	-	Anae109_3879	-	UDP-N-acetylmuramyl-tripeptide synthetase
3839	 76.72	0	4526362..4527744	+	460	153006718	-	Anae109_3880	-	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase
3840	 66.84	-1	4527745..4528887	+	380	153006719	-	Anae109_3881	-	phospho-N-acetylmuramoyl-pentapeptide-transferase
3841	 76.84	0	4528894..4530279	+	461	153006720	-	Anae109_3882	-	UDP-N-acetylmuramoylalanine--D-glutamate ligase
3842	 73.60	0	4530276..4531487	+	403	153006721	-	Anae109_3883	-	cell division protein FtsW
3843	 74.00	0	4531484..4532629	+	381	153006722	-	Anae109_3884	-	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
3844	 72.40	0	4532645..4534021	+	458	153006723	-	Anae109_3885	-	UDP-N-acetylmuramate--alanine ligase
3845	 77.01	+1	4534024..4534980	+	318	153006724	-	Anae109_3886	-	UDP-N-acetylenolpyruvoylglucosamine reductase
3846	 72.92	0	4535047..4535973	+	308	153006725	-	Anae109_3887	-	D-alanine--D-alanine ligase
3847	 75.61	0	4535983..4536843	-	286	153006726	-	Anae109_3888	-	hypothetical protein
3848	 71.86	0	4537010..4537510	+	166	153006727	-	Anae109_3889	-	hypothetical protein
3849	 77.22	+1	4537524..4537883	-	119	153006728	-	Anae109_3890	-	hypothetical protein
3850	 69.34	-1	4538402..4540498	+	698	153006729	-	Anae109_3891	-	Bilirubin oxidase
3851	 76.26	0	4540712..4541545	+	277	153006730	-	Anae109_3892	-	polypeptide-transport-associated domain-containing protein
3852	 67.80	-1	4541668..4542897	+	409	153006731	-	Anae109_3893	-	cell division protein FtsA
3853	 72.17	0	4542917..4544134	+	405	153006732	-	Anae109_3894	-	cell division protein FtsZ
3854	 74.61	0	4544065..4544769	-	234	153006733	-	Anae109_3895	-	PE-PGRS family protein
3855	 72.35	0	4544909..4545436	-	175	153006734	-	Anae109_3896	-	hypothetical protein
3856	 73.93	0	4545506..4546180	-	224	153006735	-	Anae109_3897	-	metal dependent phophohydrolase
3857	 72.18	0	4546229..4546627	+	132	153006736	-	Anae109_3898	-	hemerythrin-like metal-binding protein
3858	 76.05	0	4546798..4547799	-	333	153006737	-	Anae109_3899	-	putative esterase
3859	 76.13	0	4547927..4548856	+	309	153006738	-	Anae109_3900	-	hypothetical protein
3860	 76.64	0	4548859..4549299	+	146	153006739	-	Anae109_3901	-	hypothetical protein
3861	 78.22	+1	4549410..4550396	+	328	153006740	-	Anae109_3902	-	hypothetical protein
3862	 76.43	0	4550420..4550839	-	139	153006741	-	Anae109_3903	-	hypothetical protein
3863	 71.68	0	4550899..4553613	-	904	153006742	-	Anae109_3904	-	alanyl-tRNA synthetase
3864	 79.34	+1	4553652..4554077	-	141	153006743	-	Anae109_3905	-	putative lipoprotein
3865	 73.02	0	4554306..4554998	+	230	153006744	-	Anae109_3906	-	hypothetical protein
3866	 76.68	0	4555068..4555676	-	202	153006745	-	Anae109_3907	-	tRNA (guanine-N(7)-)-methyltransferase
3867	 72.35	0	4555787..4557421	-	544	153006746	-	Anae109_3908	-	lytic transglycosylase catalytic
3868	 74.88	0	4557815..4558861	+	348	153006747	-	Anae109_3909	-	nifR3 family TIM-barrel protein
3869	 77.69	+1	4558863..4559252	+	129	153006748	-	Anae109_3910	-	Fis family transcriptional regulator
3870	 73.84	0	4559249..4560085	+	278	153006749	-	Anae109_3911	-	zinc/iron permease
3871	 75.28	0	4560129..4562867	-	912	153006750	-	Anae109_3912	-	multi-sensor signal transduction histidine kinase
3872	 73.86	0	4562891..4564252	-	453	153006751	-	Anae109_3913	-	glutamate--cysteine ligase
3873	 76.56	0	4564320..4564946	-	208	153006752	-	Anae109_3914	-	response regulator receiver protein
3874	 78.75	+1	4565004..4565516	+	170	153006753	-	Anae109_3915	-	hypothetical protein
3875	 71.53	0	4565694..4568939	+	1081	153006754	-	Anae109_3916	-	carboxyl-terminal protease
3876	 82.15	+2	4569236..4577716	+	2826	153006755	-	Anae109_3917	-	TPR repeat-containing protein
3877	 78.21	+1	4577722..4578258	+	178	153006756	-	Anae109_3918	-	hypothetical protein
3878	 73.65	0	4578270..4578971	+	233	153006757	-	Anae109_3919	-	exsB protein
3879	 62.41	-2	4578983..4579264	+	93	153006758	-	Anae109_3920	-	hypothetical protein
3880	 73.79	0	4579355..4579663	-	102	153006759	-	Anae109_3921	-	hypothetical protein
3881	 74.85	0	4579820..4580161	+	113	153006760	-	Anae109_3922	-	hypothetical protein
3882	 81.02	+2	4580204..4582084	+	626	153006761	-	Anae109_3923	-	putative Vgr-related protein
3883	 73.59	0	4582097..4582645	-	182	153006762	-	Anae109_3924	-	ferric uptake regulator family protein
3884	 76.24	0	4582714..4584990	+	758	153006763	-	Anae109_3925	-	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
3885	 71.34	0	4585183..4585653	+	156	153006764	-	Anae109_3926	-	single-strand binding protein
3886	 73.94	0	4585876..4586562	-	228	153006765	-	Anae109_3927	-	methyltransferase type 11
3887	 73.08	0	4586805..4587896	+	363	153006766	-	Anae109_3928	-	methyltransferase type 11
3888	 70.15	0	4587914..4588315	-	133	153006767	-	Anae109_3929	-	hypothetical protein
3889	 79.45	+1	4588694..4591618	+	974	153006768	-	Anae109_3930	-	TPR repeat-containing protein
3890	 67.62	-1	4591741..4592475	+	244	153006769	-	Anae109_3931	-	hypothetical protein
3891	 70.48	0	4592826..4593428	+	200	153006770	-	Anae109_3932	-	BadM/Rrf2 family transcriptional regulator
3892	 73.69	0	4593425..4594150	+	241	153006771	-	Anae109_3933	-	NAD-dependent epimerase/dehydratase
3893	 71.90	0	4594454..4595122	+	222	153006772	-	Anae109_3935	-	DNA repair protein RadC
3894	 65.86	-1	4595276..4596268	-	330	153006773	-	Anae109_3936	-	Cna B domain-containing protein
3895	 74.29	0	4596887..4597555	-	222	153006774	-	Anae109_3937	-	DNA repair protein RadC
3896	 78.03	+1	4597552..4598220	-	222	153006775	-	Anae109_3938	-	DNA repair protein RadC
3897	 76.70	0	4598465..4599829	+	454	153006776	-	Anae109_3939	-	NHL repeat-containing protein
3898	 67.66	-1	4599994..4600596	-	200	153006777	-	Anae109_3940	-	YceI family protein
3899	 73.57	0	4600734..4601399	-	221	153006778	-	Anae109_3941	-	hypothetical protein
3900	 76.34	0	4601453..4602538	-	361	153006779	-	Anae109_3942	-	dipeptidase
3901	 70.42	0	4602543..4603367	-	274	153006780	-	Anae109_3943	-	2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase
3902	 74.46	0	4603364..4604530	-	388	153006781	-	Anae109_3944	-	aminotransferase class I and II
3903	 71.44	0	4604570..4606015	+	481	153006782	-	Anae109_3945	-	soluble pyridine nucleotide transhydrogenase
3904	 66.67	-1	4606020..4606223	-	67	153006783	-	Anae109_3946	-	hypothetical protein
3905	 76.09	0	4606466..4607590	-	374	153006784	-	Anae109_3947	-	mucin-associated surface protein (MASP), putative
3906	 68.77	-1	4607593..4608543	-	316	153006785	-	Anae109_3948	-	cobyrinic acid ac-diamide synthase
3907	 79.88	+1	4608552..4610261	-	569	153006786	-	Anae109_3949	-	heat domain-containing protein
3908	 72.46	0	4610378..4611688	-	436	153006787	-	Anae109_3950	-	major facilitator transporter
3909	 74.86	0	4611767..4612291	-	174	153006788	-	Anae109_3951	-	hypothetical protein
3910	 74.76	0	4612393..4613664	-	423	153006789	-	Anae109_3952	-	CBS domain-containing protein
3911	 67.07	-1	4613730..4613975	+	81	153006790	-	Anae109_3953	-	phosphoribosylformylglycinamidine synthase, purS
3912	 72.60	0	4614094..4614750	+	218	153006791	-	Anae109_3954	-	phosphoribosylformylglycinamidine synthase I
73.23	MEAN

3.77	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.