IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter sp. Fw109-5



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 73.23 STD DEV: 3.77
Anaeromyxobacter sp. Fw109-5, complete genome - 1..5277990
4466 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3748	 73.65	0	4415482..4416111	+	209	153006627	-	Anae109_3789	-	methyltransferase type 12
3749	 74.31	0	4416158..4416484	+	108	153006628	-	Anae109_3790	-	phage shock protein C, PspC
3750	 73.37	0	4416777..4417865	-	362	153006629	-	Anae109_3791	-	HNH endonuclease
3751	 72.15	0	4418273..4419748	-	491	153006630	-	Anae109_3792	-	putative nicotinate phosphoribosyltransferase
3752	 72.41	0	4419962..4422817	+	951	153006631	-	Anae109_3793	-	aconitate hydratase 1
3753	 75.61	0	4422835..4423203	+	122	153006632	-	Anae109_3794	-	hypothetical protein
3754	 76.22	0	4423243..4425420	-	725	153006633	-	Anae109_3795	-	histidine kinase
3755	 72.93	0	4425519..4425869	-	116	153006634	-	Anae109_3796	-	hypothetical protein
3756	 74.05	0	4426008..4426427	+	139	153006635	-	Anae109_3797	-	hypothetical protein
3757	 65.91	-1	4426760..4428088	+	442	153006636	-	Anae109_3798	-	type I citrate synthase
3758	 74.67	0	4428284..4429483	-	399	153006637	-	Anae109_3799	-	peptidase M23B
3759	 75.48	0	4429603..4429965	-	120	153006638	-	Anae109_3800	-	hypothetical protein
3760	 74.94	0	4430003..4431586	+	527	153006639	-	Anae109_3801	-	RNA-binding S1 domain-containing protein
3761	 74.62	0	4431606..4433378	-	590	153006640	-	Anae109_3802	-	malto-oligosyltrehalose trehalohydrolase
3762	 68.68	-1	4433608..4435395	+	595	153006641	-	Anae109_3803	-	phosphoenolpyruvate carboxykinase
3763	 76.55	0	4435528..4436286	+	252	153006642	-	Anae109_3804	-	hypothetical protein
3764	 70.00	0	4436321..4436650	+	109	153006643	-	Anae109_3805	-	hypothetical protein
3765	 76.93	0	4437233..4438138	-	301	153006644	-	Anae109_3806	-	metal dependent phosphohydrolase
3766	 69.08	-1	4438276..4438773	-	165	153006645	-	Anae109_3807	-	SsrA-binding protein
3767	 75.52	0	4438770..4439639	-	289	153006646	-	Anae109_3808	-	pantoate--beta-alanine ligase
3768	 72.66	0	4439679..4440596	-	305	153006647	-	Anae109_3809	-	3-methyl-2-oxobutanoate hydroxymethyltransferase
3769	 68.06	-1	4440662..4441309	-	215	153006648	-	Anae109_3810	-	deoxynucleoside kinase
3770	 70.04	0	4441525..4441791	+	88	153006649	-	Anae109_3811	-	hypothetical protein
3771	 76.38	0	4442207..4443277	-	356	153006650	-	Anae109_3812	-	dimethyladenosine transferase
3772	 73.55	0	4443274..4444275	-	333	153006651	-	Anae109_3813	-	metalloendopeptidase glycoprotease family
3773	 72.10	0	4444361..4446568	-	735	153006652	-	Anae109_3814	-	response regulator receiver protein
3774	 78.79	+1	4446673..4448355	-	560	153006653	-	Anae109_3815	-	heat shock protein DnaJ domain-containing protein
3775	 76.60	0	4448763..4449809	+	348	153006654	-	Anae109_3816	-	diacylglycerol kinase catalytic region
3776	 70.95	0	4449834..4450604	+	256	153006655	-	Anae109_3817	-	protein phosphatase 2C-like protein
3777	 77.68	+1	4450736..4451770	-	344	153006656	-	Anae109_3818	-	nucleotidyl transferase
3778	 74.03	0	4451779..4452240	-	153	153006657	-	Anae109_3819	-	putative GAF sensor protein
3779	 75.80	0	4452246..4453460	+	404	153006658	-	Anae109_3820	-	major facilitator transporter
3780	 68.06	-1	4453654..4454085	+	143	153006659	-	Anae109_3821	-	hypothetical protein
3781	 73.62	0	4454151..4454783	-	210	153006660	-	Anae109_3822	-	transport-associated
3782	 72.97	0	4454881..4455483	-	200	153006661	-	Anae109_3823	-	exonuclease RNase T and DNA polymerase III
3783	 74.53	0	4455529..4457346	-	605	153006662	-	Anae109_3824	-	CBS domain-containing protein
3784	 75.01	0	4457413..4459209	-	598	153006663	-	Anae109_3825	-	CBS domain-containing protein
3785	 77.74	+1	4459261..4460262	-	333	153006664	-	Anae109_3826	-	protein of unknown function DUF294 nucleotidyltransferase putative
3786	 71.67	0	4460333..4460812	+	159	153006665	-	Anae109_3827	-	hypothetical protein
3787	 74.16	0	4461146..4462519	+	457	153006666	-	Anae109_3828	-	Na+/H+ antiporter NhaA
3788	 74.31	0	4462864..4463373	+	169	153006667	-	Anae109_3829	-	hypothetical protein
3789	 74.12	0	4463484..4464395	+	303	153006668	-	Anae109_3830	-	universal stress family protein
3790	 73.63	0	4464445..4465449	+	334	153006669	-	Anae109_3831	-	cation antiporter (Na+/Ca2+)
3791	 65.64	-2	4465588..4467348	-	586	153006670	-	Anae109_3832	-	symporter
3792	 60.15	-2	4467379..4467639	-	86	153006671	-	Anae109_3833	-	membrane protein
3793	 69.67	0	4468020..4469417	-	465	153006672	-	Anae109_3834	-	hypothetical protein
3794	 65.78	-1	4469839..4470177	+	112	153006673	-	Anae109_3835	-	hypothetical protein
3795	 68.21	-1	4470202..4471821	+	539	153006674	-	Anae109_3836	-	SSS family solute/sodium (Na+) symporter
3796	 75.98	0	4472054..4473739	-	561	153006675	-	Anae109_3837	-	methyl-accepting chemotaxis sensory transducer
3797	 74.27	0	4474123..4475451	+	442	153006676	-	Anae109_3838	-	metallophosphoesterase
3798	 76.68	0	4476196..4477254	-	352	153006677	-	Anae109_3839	-	NADH:flavin oxidoreductase/NADH oxidase
3799	 79.37	+1	4477428..4478513	-	361	153006678	-	Anae109_3840	-	hypothetical protein
3800	 76.90	0	4478570..4478911	-	113	153006679	-	Anae109_3841	-	hypothetical protein
3801	 74.26	0	4479305..4481386	-	693	153006680	-	Anae109_3842	-	hypothetical protein
3802	 70.25	0	4481632..4481910	+	92	153006681	-	Anae109_3843	-	hypothetical protein
3803	 76.00	0	4482228..4483673	+	481	153006682	-	Anae109_3844	-	major facilitator transporter
3804	 71.47	0	4483670..4484836	-	388	153006683	-	Anae109_3845	-	cystathionine gamma-lyase
3805	 67.75	-1	4484860..4486239	-	459	153006684	-	Anae109_3846	-	pyridoxal-5'-phosphate-dependent protein beta subunit
3806	 73.47	0	4486359..4487402	+	347	153006685	-	Anae109_3847	-	aminoglycoside phosphotransferase
3807	 71.46	0	4487500..4489794	-	764	153006686	-	Anae109_3848	-	putative nitric-oxide reductase
3808	 71.75	0	4489934..4490779	+	281	153006687	-	Anae109_3849	-	beta-lactamase domain-containing protein
3809	 73.45	0	4491072..4492457	-	461	153006688	-	Anae109_3850	-	HNH endonuclease
3810	 73.52	0	4492871..4494037	+	388	153006689	-	Anae109_3851	-	protein of unknown function Met10
3811	 75.07	0	4494143..4496284	+	713	153006690	-	Anae109_3852	-	cyclic nucleotide-binding protein
3812	 74.55	0	4496291..4498066	+	591	153006691	-	Anae109_3853	-	multi-sensor signal transduction histidine kinase
3813	 75.62	0	4498073..4499245	-	390	153006692	-	Anae109_3854	-	tRNA synthetase class II (D K and N)
3814	 80.20	+1	4499305..4500117	+	270	153006693	-	Anae109_3855	-	alpha/beta hydrolase fold
3815	 80.00	+1	4500108..4500902	+	264	153006694	-	Anae109_3856	-	methyltransferase type 11
3816	 70.09	0	4500899..4501336	-	145	153006695	-	Anae109_3857	-	putative PAS/PAC sensor protein
3817	 72.24	0	4501717..4503492	+	591	153006696	-	Anae109_3858	-	protein kinase
3818	 79.25	+1	4503489..4504076	+	195	153006697	-	Anae109_3859	-	FHA domain-containing protein
3819	 76.59	0	4504063..4504848	-	261	153006698	-	Anae109_3860	-	enoyl-CoA hydratase/isomerase
3820	 69.95	0	4504852..4505064	-	70	153006699	-	Anae109_3861	-	biotin/lipoyl attachment domain-containing protein
3821	 74.77	0	4505257..4505799	-	180	153006700	-	Anae109_3862	-	response regulator receiver protein
3822	 75.59	0	4505962..4508775	-	937	153006701	-	Anae109_3863	-	ATPase, P-type (transporting), HAD superfamily, subfamily IC
3823	 75.19	0	4508954..4509727	+	257	153006702	-	Anae109_3864	-	short-chain dehydrogenase/reductase SDR
3824	 70.71	0	4509813..4511171	+	452	153006703	-	Anae109_3865	-	tryptophan synthase subunit beta
3825	 77.74	+1	4511222..4512811	+	529	153006704	-	Anae109_3866	-	sodium/hydrogen exchanger
3826	 75.97	0	4512847..4514136	+	429	153006705	-	Anae109_3867	-	sodium/hydrogen exchanger
3827	 67.39	-1	4514286..4515248	+	320	153006706	-	Anae109_3868	-	ABC nitrate/sulfonate/bicarbonate transporter, periplasmic ligand binding protein
3828	 69.82	0	4515245..4516069	+	274	153006707	-	Anae109_3869	-	binding-protein-dependent transport systems inner membrane component
3829	 73.14	0	4516066..4516884	+	272	153006708	-	Anae109_3870	-	ABC transporter related
3830	 60.48	-2	4516970..4517341	-	123	153006709	-	Anae109_3871	-	hypothetical protein
3831	 69.29	-1	4517939..4518892	-	317	153006710	-	Anae109_3872	-	hypothetical protein
3832	 70.44	0	4519128..4519949	-	273	153006711	-	Anae109_3873	-	short chain dehydrogenase
3833	 68.95	-1	4520452..4520889	+	145	153006712	-	Anae109_3874	-	hypothetical protein
3834	 71.29	0	4520919..4521221	+	100	153006713	-	Anae109_3875	-	Sulfate transporter/antisigma-factor antagonist STAS
3835	 74.71	0	4521218..4522150	+	310	153006714	-	Anae109_3876	-	S-adenosyl-methyltransferase MraW
3836	 78.46	+1	4522147..4522680	+	177	153006715	-	Anae109_3877	-	hypothetical protein
3837	 75.50	0	4522684..4524699	+	671	153006716	-	Anae109_3878	-	peptidoglycan glycosyltransferase
3838	 76.76	0	4524761..4526365	+	534	153006717	-	Anae109_3879	-	UDP-N-acetylmuramyl-tripeptide synthetase
3839	 76.72	0	4526362..4527744	+	460	153006718	-	Anae109_3880	-	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase
3840	 66.84	-1	4527745..4528887	+	380	153006719	-	Anae109_3881	-	phospho-N-acetylmuramoyl-pentapeptide-transferase
3841	 76.84	0	4528894..4530279	+	461	153006720	-	Anae109_3882	-	UDP-N-acetylmuramoylalanine--D-glutamate ligase
3842	 73.60	0	4530276..4531487	+	403	153006721	-	Anae109_3883	-	cell division protein FtsW
3843	 74.00	0	4531484..4532629	+	381	153006722	-	Anae109_3884	-	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
3844	 72.40	0	4532645..4534021	+	458	153006723	-	Anae109_3885	-	UDP-N-acetylmuramate--alanine ligase
3845	 77.01	+1	4534024..4534980	+	318	153006724	-	Anae109_3886	-	UDP-N-acetylenolpyruvoylglucosamine reductase
3846	 72.92	0	4535047..4535973	+	308	153006725	-	Anae109_3887	-	D-alanine--D-alanine ligase
3847	 75.61	0	4535983..4536843	-	286	153006726	-	Anae109_3888	-	hypothetical protein
73.23	MEAN

3.77	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.