IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter sp. Fw109-5



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 73.23 STD DEV: 3.77
Anaeromyxobacter sp. Fw109-5, complete genome - 1..5277990
4466 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3651	 66.67	-1	4304161..4304529	-	122	153006530	-	Anae109_3692	-	hypothetical protein
3652	 73.82	0	4304643..4305509	-	288	153006531	-	Anae109_3693	-	alpha/beta hydrolase fold
3653	 79.81	+1	4305543..4307459	-	638	153006532	-	Anae109_3694	-	TPR repeat-containing protein
3654	 77.25	+1	4307520..4308152	-	210	153006533	-	Anae109_3695	-	DNA binding domain-containing protein
3655	 71.46	0	4308182..4308994	+	270	153006534	-	Anae109_3696	-	Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
3656	 70.87	0	4308999..4309712	-	237	153006535	-	Anae109_3697	-	hypothetical protein
3657	 72.51	0	4309709..4310632	-	307	153006536	-	Anae109_3698	-	fibronectin type III domain-containing protein
3658	 76.83	0	4310786..4311808	-	340	153006537	-	Anae109_3699	-	aspartate-semialdehyde dehydrogenase
3659	 77.89	+1	4311915..4312814	-	299	153006538	-	Anae109_3700	-	hypothetical protein
3660	 74.91	0	4312827..4314281	-	484	153006539	-	Anae109_3701	-	peptidase M50
3661	 78.39	+1	4314383..4315141	-	252	153006540	-	Anae109_3702	-	peptidase M22 glycoprotease
3662	 71.85	0	4315152..4316828	-	558	153006541	-	Anae109_3703	-	putative membrane-associated zinc metalloprotease
3663	 74.32	0	4316934..4318109	-	391	153006542	-	Anae109_3704	-	1-deoxy-D-xylulose 5-phosphate reductoisomerase
3664	 73.14	0	4318138..4318971	-	277	153006543	-	Anae109_3705	-	phosphatidate cytidylyltransferase
3665	 73.31	0	4318975..4319742	-	255	153006544	-	Anae109_3706	-	undecaprenyl diphosphate synthase
3666	 75.55	0	4319833..4320879	+	348	153006545	-	Anae109_3707	-	protein kinase
3667	 80.80	+2	4321002..4321730	+	242	153006546	-	Anae109_3708	-	hypothetical protein
3668	 71.09	0	4321743..4322624	+	293	153006547	-	Anae109_3709	-	DNA replication protein-like protein
3669	 74.57	0	4322676..4323839	-	387	153006548	-	Anae109_3710	-	aspartate kinase
3670	 71.54	0	4324062..4324328	+	88	153006549	-	Anae109_3711	-	DNA-directed RNA polymerase, omega subunit
3671	 76.56	0	4324438..4325124	-	228	153006550	-	Anae109_3712	-	hypothetical protein
3672	 70.42	0	4325121..4325732	-	203	153006551	-	Anae109_3713	-	hypothetical protein
3673	 63.61	-2	4326168..4326461	+	97	153006552	-	Anae109_3714	-	chaperonin Cpn10
3674	 67.03	-1	4326502..4328145	+	547	153006553	-	Anae109_3715	-	chaperonin GroEL
3675	 71.59	0	4328297..4328560	+	87	153006554	-	Anae109_3716	-	hypothetical protein
3676	 74.82	0	4328668..4330347	+	559	153006555	-	Anae109_3717	-	hypothetical protein
3677	 75.06	0	4330151..4330591	-	146	153006556	-	Anae109_3718	-	hypothetical protein
3678	 73.13	0	4330673..4331074	-	133	153006557	-	Anae109_3719	-	thioesterase superfamily protein
3679	 72.35	0	4331163..4332059	-	298	153006558	-	Anae109_3720	-	hypothetical protein
3680	 73.71	0	4332175..4333494	+	439	153006559	-	Anae109_3721	-	phospholipase D/transphosphatidylase
3681	 74.62	0	4333567..4337739	-	1390	153006560	-	Anae109_3722	-	hypothetical protein
3682	 73.33	0	4338010..4338999	-	329	153006561	-	Anae109_3723	-	succinyl-CoA synthetase, alpha subunit
3683	 72.43	0	4339034..4340212	-	392	153006562	-	Anae109_3724	-	succinyl-CoA synthetase, beta subunit
3684	 74.54	0	4340425..4342380	+	651	153006563	-	Anae109_3725	-	sigma-54 dependent trancsriptional regulator
3685	 75.20	0	4342400..4342645	-	81	153006564	-	Anae109_3726	-	hypothetical protein
3686	 73.97	0	4342745..4343566	-	273	153006565	-	Anae109_3727	-	hypothetical protein
3687	 74.01	0	4343673..4344653	-	326	153006566	-	Anae109_3728	-	cyclic nucleotide-binding protein
3688	 76.12	0	4344643..4347372	-	909	153006567	-	Anae109_3729	-	HEAT repeat-containing PBS lyase
3689	 71.65	0	4347369..4348571	-	400	153006568	-	Anae109_3730	-	ATP/ADP translocase-like protein
3690	 74.90	0	4348685..4351345	-	886	153006569	-	Anae109_3731	-	hypothetical protein
3691	 71.51	0	4351422..4352432	-	336	153006570	-	Anae109_3732	-	alcohol dehydrogenase
3692	 71.93	0	4352620..4353360	+	246	153006571	-	Anae109_3733	-	hypothetical protein
3693	 75.88	0	4354047..4354556	+	169	153006572	-	Anae109_3734	-	LrgA family protein
3694	 73.61	0	4354553..4355272	+	239	153006573	-	Anae109_3735	-	LrgB family protein
3695	 72.18	0	4355295..4356473	-	392	153006574	-	Anae109_3736	-	hypothetical protein
3696	 75.62	0	4356541..4357221	-	226	153006575	-	Anae109_3737	-	endonuclease III
3697	 73.57	0	4357782..4358708	+	308	153006576	-	Anae109_3738	-	hypothetical protein
3698	 74.36	0	4359404..4359949	+	181	153006577	-	Anae109_3739	-	uracil-DNA glycosylase superfamily protein
3699	 75.97	0	4360046..4361077	+	343	153006578	-	Anae109_3740	-	threonine aldolase
3700	 78.48	+1	4361173..4362171	+	332	153006579	-	Anae109_3741	-	peptidase M23B
3701	 79.27	+1	4362330..4363376	+	348	153006580	-	Anae109_3742	-	hypothetical protein
3702	 69.82	0	4363519..4364373	+	284	153006581	-	Anae109_3743	-	CDP-diacylglycerol--serine O-phosphatidyltransferase
3703	 76.99	0	4364413..4364964	+	183	153006582	-	Anae109_3744	-	phosphatidylglycerophosphatase A
3704	 75.83	0	4364979..4366211	+	410	153006583	-	Anae109_3745	-	competence/damage-inducible protein CinA
3705	 75.24	0	4366242..4366661	-	139	153006584	-	Anae109_3746	-	hypothetical protein
3706	 75.05	0	4366750..4367238	+	162	153006585	-	Anae109_3747	-	hypothetical protein
3707	 69.83	0	4367435..4370473	+	1012	153006586	-	Anae109_3748	-	hypothetical protein
3708	 70.74	0	4370756..4372573	-	605	153006587	-	Anae109_3749	-	hypothetical protein
3709	 72.73	0	4373082..4374104	-	340	153006588	-	Anae109_3750	-	recA protein
3710	 76.53	0	4374165..4375685	-	506	153006589	-	Anae109_3751	-	Mg chelatase, subunit ChlI
3711	 77.74	+1	4375875..4376858	-	327	153006590	-	Anae109_3752	-	helix-turn-helix type 11 domain-containing protein
3712	 73.04	0	4376922..4377470	+	182	153006591	-	Anae109_3753	-	deaminase-reductase domain-containing protein
3713	 78.34	+1	4377467..4378297	+	276	153006592	-	Anae109_3754	-	NmrA family protein
3714	 78.79	+1	4378313..4378873	-	186	153006593	-	Anae109_3755	-	uracil-DNA glycosylase superfamily protein
3715	 71.24	0	4379149..4380699	-	516	153006594	-	Anae109_3756	-	tetratricopeptide TPR_4
3716	 78.22	+1	4380999..4381604	-	201	153006595	-	Anae109_3757	-	hypothetical protein
3717	 64.80	-2	4381636..4382223	-	195	153006596	-	Anae109_3758	-	MglA protein
3718	 66.88	-1	4382226..4382705	-	159	153006597	-	Anae109_3759	-	roadblock/LC7 family protein
3719	 70.85	0	4382870..4383466	-	198	153006598	-	Anae109_3760	-	recombination protein RecR
3720	 69.55	0	4383470..4383781	-	103	153006599	-	Anae109_3761	-	hypothetical protein
3721	 75.45	0	4383805..4385625	-	606	153006600	-	Anae109_3762	-	DNA polymerase III, subunits gamma and tau
3722	 75.94	0	4386104..4386556	-	150	153006601	-	Anae109_3763	-	CMP/dCMP deaminase zinc-binding
3723	 74.12	0	4386617..4388119	-	500	153006602	-	Anae109_3764	-	hypothetical protein
3724	 77.39	+1	4388129..4388986	-	285	153006603	-	Anae109_3765	-	hypothetical protein
3725	 73.18	0	4389176..4390957	-	593	153006604	-	Anae109_3766	-	radical SAM domain-containing protein
3726	 74.57	0	4391159..4392082	+	307	153006605	-	Anae109_3767	-	DSBA oxidoreductase
3727	 75.06	0	4392093..4393367	+	424	153006606	-	Anae109_3768	-	hypothetical protein
3728	 77.24	+1	4393364..4394413	+	349	153006607	-	Anae109_3769	-	tRNA pseudouridine synthase D TruD
3729	 73.32	0	4394561..4395883	-	440	153006608	-	Anae109_3770	-	OmpA/MotB domain-containing protein
3730	 74.79	0	4395880..4396236	-	118	153006609	-	Anae109_3771	-	putative treponemal membrane protein B precursor-like protein
3731	 68.91	-1	4396382..4396648	+	88	153006610	-	Anae109_3772	-	hypothetical protein
3732	 69.21	-1	4396716..4398248	-	510	153006611	-	Anae109_3773	-	parallel beta-helix repeat-containing protein
3733	 75.16	0	4398248..4399201	-	317	153006612	-	Anae109_3774	-	PEGA domain-containing protein
3734	 74.78	0	4399198..4400664	-	488	153006613	-	Anae109_3775	-	protein kinase
3735	 78.07	+1	4400815..4401735	+	306	153006614	-	Anae109_3776	-	FHA domain-containing protein
3736	 74.53	0	4401789..4403213	+	474	153006615	-	Anae109_3777	-	two component, sigma54 specific, Fis family transcriptional regulator
3737	 76.67	0	4403210..4403689	+	159	153006616	-	Anae109_3778	-	hypothetical protein
3738	 75.39	0	4403709..4404407	+	232	153006617	-	Anae109_3779	-	putative PTS IIA-like nitrogen-regulatory protein PtsN
3739	 78.09	+1	4404404..4406416	+	670	153006618	-	Anae109_3780	-	NADH dehydrogenase (quinone)
3740	 76.79	0	4406413..4408377	+	654	153006619	-	Anae109_3781	-	NADH dehydrogenase (quinone)
3741	 73.25	0	4408386..4409297	+	303	153006620	-	Anae109_3782	-	respiratory-chain NADH dehydrogenase, subunit 1
3742	 69.91	0	4409303..4409950	+	215	153006621	-	Anae109_3783	-	NAD-dependent dehydrogenase subunit
3743	 73.85	0	4409958..4411391	+	477	153006622	-	Anae109_3784	-	NADH dehydrogenase (quinone)
3744	 75.71	0	4411396..4412943	+	515	153006623	-	Anae109_3785	-	NADH-ubiquinone oxidoreductase chain 49kDa
3745	 73.28	0	4412940..4413710	+	256	153006624	-	Anae109_3786	-	NADH ubiquinone oxidoreductase 20 kDa subunit
3746	 71.90	0	4414051..4414413	-	120	153006625	-	Anae109_3787	-	hypothetical protein
3747	 76.95	0	4414892..4415455	-	187	153006626	-	Anae109_3788	-	GCN5-related N-acetyltransferase
3748	 73.65	0	4415482..4416111	+	209	153006627	-	Anae109_3789	-	methyltransferase type 12
3749	 74.31	0	4416158..4416484	+	108	153006628	-	Anae109_3790	-	phage shock protein C, PspC
3750	 73.37	0	4416777..4417865	-	362	153006629	-	Anae109_3791	-	HNH endonuclease
73.23	MEAN

3.77	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.