IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter sp. Fw109-5



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 73.23 STD DEV: 3.77
Anaeromyxobacter sp. Fw109-5, complete genome - 1..5277990
4466 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3582	 70.74	0	4236293..4236562	-	89	153006461	-	Anae109_3621	-	putative transmembrane anti-sigma factor
3583	 74.43	0	4236559..4237215	-	218	153006462	-	Anae109_3622	-	ECF subfamily RNA polymerase sigma-24 factor
3584	 74.25	0	4237925..4239295	+	456	153006463	-	Anae109_3623	-	pyridine nucleotide-disulphide oxidoreductase dimerisation region
3585	 80.80	+2	4239640..4240389	-	249	153006464	-	Anae109_3624	-	hypothetical protein
3586	 73.37	0	4240386..4240952	-	188	153006465	-	Anae109_3625	-	ECF subfamily RNA polymerase sigma-24 factor
3587	 72.61	0	4241068..4241706	+	212	153006466	-	Anae109_3626	-	methionine-R-sulfoxide reductase
3588	 72.88	0	4241703..4242362	+	219	153006467	-	Anae109_3627	-	peptide methionine sulfoxide reductase
3589	 74.18	0	4242421..4243125	-	234	153006468	-	Anae109_3628	-	oxidoreductase molybdopterin binding
3590	 73.18	0	4243122..4243781	-	219	153006469	-	Anae109_3629	-	hypothetical protein
3591	 70.37	0	4243887..4244399	-	170	153006470	-	Anae109_3630	-	hypothetical protein
3592	 72.40	0	4244603..4244986	-	127	153006471	-	Anae109_3631	-	response regulator receiver protein
3593	 73.70	0	4244983..4246248	-	421	153006472	-	Anae109_3632	-	histidine kinase
3594	 74.98	0	4246245..4247423	-	392	153006473	-	Anae109_3633	-	glycosyltransferase
3595	 69.62	0	4248173..4248511	-	112	153006474	-	Anae109_3635	-	nitrogen regulatory protein P-II
3596	 70.13	0	4248882..4250411	+	509	153006475	-	Anae109_3636	-	ammonium transporter
3597	 73.49	0	4250572..4252065	+	497	153006476	-	Anae109_3637	-	glycosyl transferase group 1
3598	 66.67	-1	4252141..4252785	-	214	153006477	-	Anae109_3638	-	YceI family protein
3599	 70.67	0	4252782..4253330	-	182	153006478	-	Anae109_3639	-	YceI family protein
3600	 73.36	0	4253446..4254342	+	298	153006479	-	Anae109_3640	-	LysR family transcriptional regulator
3601	 72.47	0	4254671..4255669	+	332	153006480	-	Anae109_3641	-	hypothetical protein
3602	 74.67	0	4255774..4256223	-	149	153006481	-	Anae109_3642	-	protein tyrosine phosphatase
3603	 68.32	-1	4256220..4257365	-	381	153006482	-	Anae109_3643	-	arsenical-resistance protein
3604	 73.02	0	4257375..4257815	-	146	153006483	-	Anae109_3644	-	regulatory protein ArsR
3605	 70.10	0	4257879..4258286	+	135	153006484	-	Anae109_3645	-	thioredoxin domain-containing protein
3606	 74.96	0	4258296..4258994	+	232	153006485	-	Anae109_3646	-	cytochrome c biogenesis protein transmembrane region
3607	 70.50	0	4259029..4260123	+	364	153006486	-	Anae109_3647	-	permease
3608	 68.80	-1	4260135..4260368	+	77	153006487	-	Anae109_3648	-	redox-active disulfide protein 2
3609	 72.58	0	4260455..4261384	-	309	153006488	-	Anae109_3649	-	hypothetical protein
3610	 71.59	0	4261860..4262489	-	209	153006489	-	Anae109_3650	-	pyridoxamine 5'-phosphate oxidase-related FMN-binding
3611	 74.82	0	4262555..4263106	-	183	153006490	-	Anae109_3651	-	alkylhydroperoxidase
3612	 72.97	0	4263908..4264795	-	295	153006491	-	Anae109_3652	-	putative adenylate/guanylate cyclase
3613	 72.94	0	4264822..4265538	-	238	153006492	-	Anae109_3653	-	phosphodiesterase
3614	 72.79	0	4266136..4266951	+	271	153006493	-	Anae109_3654	-	hypothetical protein
3615	 73.46	0	4267040..4267819	-	259	153006494	-	Anae109_3655	-	short-chain dehydrogenase/reductase SDR
3616	 73.56	0	4267871..4268494	+	207	153006495	-	Anae109_3656	-	TetR family transcriptional regulator
3617	 72.98	0	4269010..4270038	-	342	153006496	-	Anae109_3657	-	LysR family transcriptional regulator
3618	 70.73	0	4270115..4271050	+	311	153006497	-	Anae109_3658	-	alpha/beta hydrolase fold
3619	 73.56	0	4271165..4271962	+	265	153006498	-	Anae109_3659	-	hypothetical protein
3620	 72.22	0	4272209..4272928	-	239	153006499	-	Anae109_3660	-	beta-lactamase domain-containing protein
3621	 74.05	0	4272900..4273820	-	306	153006500	-	Anae109_3661	-	TetR family transcriptional regulator
3622	 65.58	-2	4274126..4274584	+	152	153006501	-	Anae109_3662	-	activator of Hsp90 ATPase 1 family protein
3623	 68.04	-1	4274691..4275128	-	145	153006502	-	Anae109_3663	-	hypothetical protein
3624	 73.29	0	4275257..4276147	+	296	153006503	-	Anae109_3664	-	LysR family transcriptional regulator
3625	 75.57	0	4276402..4276884	+	160	153006504	-	Anae109_3665	-	hypothetical protein
3626	 66.67	-1	4277316..4277663	+	115	153006505	-	Anae109_3666	-	GYD family protein
3627	 73.68	0	4278039..4280789	+	916	153006506	-	Anae109_3667	-	ATPase-like protein
3628	 73.00	0	4281249..4282874	+	541	153006507	-	Anae109_3668	-	response regulator receiver protein
3629	 72.31	0	4283013..4283933	+	306	153006508	-	Anae109_3669	-	alpha/beta hydrolase fold
3630	 65.89	-1	4284242..4284625	-	127	153006509	-	Anae109_3670	-	hypothetical protein
3631	 77.54	+1	4284868..4285152	+	94	153006510	-	Anae109_3671	-	hypothetical protein
3632	 77.50	+1	4285182..4285892	+	236	153006511	-	Anae109_3672	-	glutamine amidotransferase class-I
3633	 64.10	-2	4286112..4286423	-	103	153006512	-	Anae109_3673	-	helix-turn-helix domain-containing protein
3634	 64.69	-2	4286420..4286773	-	117	153006513	-	Anae109_3674	-	hypothetical protein
3635	 69.72	0	4286823..4287182	+	119	153006514	-	Anae109_3675	-	hypothetical protein
3636	 71.83	0	4287301..4287687	+	128	153006515	-	Anae109_3676	-	hypothetical protein
3637	 65.40	-2	4287691..4288086	+	131	153006516	-	Anae109_3677	-	IS66 Orf2 family protein
3638	 68.02	-1	4288106..4289653	+	515	153006517	-	Anae109_3678	-	transposase IS66
3639	 67.37	-1	4290307..4294293	-	1328	153006518	-	Anae109_3679	-	hypothetical protein
3640	 64.42	-2	4294334..4294600	+	88	153006519	-	Anae109_3680	-	hypothetical protein
3641	 67.64	-1	4294616..4295131	+	171	153006520	-	Anae109_3681	-	hypothetical protein
3642	 77.31	+1	4295824..4297035	+	403	153006521	-	Anae109_3683	-	glycosyl transferase family protein
3643	 67.76	-1	4296933..4297667	-	244	153006522	-	Anae109_3684	-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
3644	 78.02	+1	4297664..4299151	-	495	153006523	-	Anae109_3685	-	TPR repeat-containing protein
3645	 72.86	0	4299156..4299785	-	209	153006524	-	Anae109_3686	-	lytic transglycosylase catalytic
3646	 72.51	0	4299876..4301483	+	535	153006525	-	Anae109_3687	-	L-aspartate oxidase
3647	 74.46	0	4301503..4302156	-	217	153006526	-	Anae109_3688	-	hypothetical protein
3648	 71.99	0	4302153..4302791	-	212	153006527	-	Anae109_3689	-	orotate phosphoribosyltransferase
3649	 77.53	+1	4302788..4303606	-	272	153006528	-	Anae109_3690	-	nuclease
3650	 70.95	0	4303622..4304158	-	178	153006529	-	Anae109_3691	-	hypothetical protein
3651	 66.67	-1	4304161..4304529	-	122	153006530	-	Anae109_3692	-	hypothetical protein
3652	 73.82	0	4304643..4305509	-	288	153006531	-	Anae109_3693	-	alpha/beta hydrolase fold
3653	 79.81	+1	4305543..4307459	-	638	153006532	-	Anae109_3694	-	TPR repeat-containing protein
3654	 77.25	+1	4307520..4308152	-	210	153006533	-	Anae109_3695	-	DNA binding domain-containing protein
3655	 71.46	0	4308182..4308994	+	270	153006534	-	Anae109_3696	-	Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
3656	 70.87	0	4308999..4309712	-	237	153006535	-	Anae109_3697	-	hypothetical protein
3657	 72.51	0	4309709..4310632	-	307	153006536	-	Anae109_3698	-	fibronectin type III domain-containing protein
3658	 76.83	0	4310786..4311808	-	340	153006537	-	Anae109_3699	-	aspartate-semialdehyde dehydrogenase
3659	 77.89	+1	4311915..4312814	-	299	153006538	-	Anae109_3700	-	hypothetical protein
3660	 74.91	0	4312827..4314281	-	484	153006539	-	Anae109_3701	-	peptidase M50
3661	 78.39	+1	4314383..4315141	-	252	153006540	-	Anae109_3702	-	peptidase M22 glycoprotease
3662	 71.85	0	4315152..4316828	-	558	153006541	-	Anae109_3703	-	putative membrane-associated zinc metalloprotease
3663	 74.32	0	4316934..4318109	-	391	153006542	-	Anae109_3704	-	1-deoxy-D-xylulose 5-phosphate reductoisomerase
3664	 73.14	0	4318138..4318971	-	277	153006543	-	Anae109_3705	-	phosphatidate cytidylyltransferase
3665	 73.31	0	4318975..4319742	-	255	153006544	-	Anae109_3706	-	undecaprenyl diphosphate synthase
3666	 75.55	0	4319833..4320879	+	348	153006545	-	Anae109_3707	-	protein kinase
3667	 80.80	+2	4321002..4321730	+	242	153006546	-	Anae109_3708	-	hypothetical protein
3668	 71.09	0	4321743..4322624	+	293	153006547	-	Anae109_3709	-	DNA replication protein-like protein
3669	 74.57	0	4322676..4323839	-	387	153006548	-	Anae109_3710	-	aspartate kinase
3670	 71.54	0	4324062..4324328	+	88	153006549	-	Anae109_3711	-	DNA-directed RNA polymerase, omega subunit
3671	 76.56	0	4324438..4325124	-	228	153006550	-	Anae109_3712	-	hypothetical protein
3672	 70.42	0	4325121..4325732	-	203	153006551	-	Anae109_3713	-	hypothetical protein
3673	 63.61	-2	4326168..4326461	+	97	153006552	-	Anae109_3714	-	chaperonin Cpn10
3674	 67.03	-1	4326502..4328145	+	547	153006553	-	Anae109_3715	-	chaperonin GroEL
3675	 71.59	0	4328297..4328560	+	87	153006554	-	Anae109_3716	-	hypothetical protein
3676	 74.82	0	4328668..4330347	+	559	153006555	-	Anae109_3717	-	hypothetical protein
3677	 75.06	0	4330151..4330591	-	146	153006556	-	Anae109_3718	-	hypothetical protein
3678	 73.13	0	4330673..4331074	-	133	153006557	-	Anae109_3719	-	thioesterase superfamily protein
3679	 72.35	0	4331163..4332059	-	298	153006558	-	Anae109_3720	-	hypothetical protein
3680	 73.71	0	4332175..4333494	+	439	153006559	-	Anae109_3721	-	phospholipase D/transphosphatidylase
3681	 74.62	0	4333567..4337739	-	1390	153006560	-	Anae109_3722	-	hypothetical protein
73.23	MEAN

3.77	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.