IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter sp. Fw109-5



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 73.23 STD DEV: 3.77
Anaeromyxobacter sp. Fw109-5, complete genome - 1..5277990
4466 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3546	 77.12	+1	4200073..4200531	-	152	153006425	-	Anae109_3585	-	hypothetical protein
3547	 77.93	+1	4200528..4201868	-	446	153006426	-	Anae109_3586	-	hypothetical protein
3548	 76.77	0	4201923..4202486	+	187	153006427	-	Anae109_3587	-	ATP--cobalamin adenosyltransferase
3549	 77.12	+1	4202483..4203190	+	235	153006428	-	Anae109_3588	-	short-chain dehydrogenase/reductase SDR
3550	 66.15	-1	4203320..4203703	+	127	153006429	-	Anae109_3589	-	iron-sulfur cluster assembly accessory protein
3551	 73.85	0	4203816..4204469	+	217	153006430	-	Anae109_3590	-	beta-lactamase domain-containing protein
3552	 70.55	0	4204581..4205429	-	282	153006431	-	Anae109_3591	-	short-chain dehydrogenase/reductase SDR
3553	 74.55	0	4205434..4205763	-	109	153006432	-	Anae109_3592	-	TPR repeat-containing protein
3554	 77.12	+1	4205851..4206462	+	203	153006433	-	Anae109_3593	-	molybdopterin-guanine dinucleotide biosynthesis protein A
3555	 77.84	+1	4206724..4207242	+	172	153006434	-	Anae109_3594	-	hypothetical protein
3556	 73.93	0	4207239..4210844	+	1201	153006435	-	Anae109_3595	-	nitrate reductase, alpha subunit
3557	 74.97	0	4210854..4212311	+	485	153006436	-	Anae109_3596	-	nitrate reductase, beta subunit
3558	 79.46	+1	4212308..4212862	+	184	153006437	-	Anae109_3597	-	nitrate reductase molybdenum cofactor assembly chaperone
3559	 74.14	0	4212859..4214958	+	699	153006438	-	Anae109_3598	-	nitrite transporter
3560	 73.43	0	4215484..4216311	-	275	153006439	-	Anae109_3599	-	hypothetical protein
3561	 74.88	0	4216502..4216915	-	137	153006440	-	Anae109_3600	-	CrcB protein
3562	 74.30	0	4216993..4217739	+	248	153006441	-	Anae109_3601	-	short-chain dehydrogenase/reductase SDR
3563	 76.26	0	4217769..4218539	-	256	153006442	-	Anae109_3602	-	hypothetical protein
3564	 79.02	+1	4218639..4220006	+	455	153006443	-	Anae109_3603	-	uroporphyrin-III C-methyltransferase
3565	 77.51	+1	4220018..4221862	+	614	153006444	-	Anae109_3604	-	nitrite/sulfite reductase hemoprotein beta subunit
3566	 75.22	0	4222047..4223321	+	424	153006445	-	Anae109_3605	-	threonine synthase
3567	 72.10	0	4223338..4223613	+	91	153006446	-	Anae109_3606	-	thiamineS protein
3568	 71.82	0	4223617..4224780	+	387	153006447	-	Anae109_3607	-	UBA/THIF-type NAD/FAD binding protein
3569	 77.44	+1	4224780..4225754	+	324	153006448	-	Anae109_3608	-	cysteine synthase
3570	 75.37	0	4225751..4226704	+	317	153006449	-	Anae109_3609	-	pyridoxal-5'-phosphate-dependent protein beta subunit
3571	 74.32	0	4226701..4227144	+	147	153006450	-	Anae109_3610	-	hypothetical protein
3572	 71.93	0	4227273..4227899	+	208	153006451	-	Anae109_3611	-	hypothetical protein
3573	 77.28	+1	4227931..4228740	-	269	153006452	-	Anae109_3612	-	hypothetical protein
3574	 69.91	0	4228749..4229765	-	338	153006453	-	Anae109_3613	-	bile acid:sodium symporter
3575	 73.33	0	4230184..4230393	+	69	153006454	-	Anae109_3614	-	hypothetical protein
3576	 71.00	0	4230514..4231275	+	253	153006455	-	Anae109_3615	-	hypothetical protein
3577	 77.07	+1	4231299..4231865	-	188	153006456	-	Anae109_3616	-	methyltransferase type 11
3578	 74.83	0	4232665..4233828	-	387	153006457	-	Anae109_3617	-	peptidase M24
3579	 71.98	0	4233905..4235164	-	419	153006458	-	Anae109_3618	-	hypothetical protein
3580	 75.67	0	4235342..4235641	+	99	153006459	-	Anae109_3619	-	hypothetical protein
3581	 78.83	+1	4235697..4236296	-	199	153006460	-	Anae109_3620	-	hypothetical protein
3582	 70.74	0	4236293..4236562	-	89	153006461	-	Anae109_3621	-	putative transmembrane anti-sigma factor
3583	 74.43	0	4236559..4237215	-	218	153006462	-	Anae109_3622	-	ECF subfamily RNA polymerase sigma-24 factor
3584	 74.25	0	4237925..4239295	+	456	153006463	-	Anae109_3623	-	pyridine nucleotide-disulphide oxidoreductase dimerisation region
3585	 80.80	+2	4239640..4240389	-	249	153006464	-	Anae109_3624	-	hypothetical protein
3586	 73.37	0	4240386..4240952	-	188	153006465	-	Anae109_3625	-	ECF subfamily RNA polymerase sigma-24 factor
3587	 72.61	0	4241068..4241706	+	212	153006466	-	Anae109_3626	-	methionine-R-sulfoxide reductase
3588	 72.88	0	4241703..4242362	+	219	153006467	-	Anae109_3627	-	peptide methionine sulfoxide reductase
3589	 74.18	0	4242421..4243125	-	234	153006468	-	Anae109_3628	-	oxidoreductase molybdopterin binding
3590	 73.18	0	4243122..4243781	-	219	153006469	-	Anae109_3629	-	hypothetical protein
3591	 70.37	0	4243887..4244399	-	170	153006470	-	Anae109_3630	-	hypothetical protein
3592	 72.40	0	4244603..4244986	-	127	153006471	-	Anae109_3631	-	response regulator receiver protein
3593	 73.70	0	4244983..4246248	-	421	153006472	-	Anae109_3632	-	histidine kinase
3594	 74.98	0	4246245..4247423	-	392	153006473	-	Anae109_3633	-	glycosyltransferase
3595	 69.62	0	4248173..4248511	-	112	153006474	-	Anae109_3635	-	nitrogen regulatory protein P-II
3596	 70.13	0	4248882..4250411	+	509	153006475	-	Anae109_3636	-	ammonium transporter
3597	 73.49	0	4250572..4252065	+	497	153006476	-	Anae109_3637	-	glycosyl transferase group 1
3598	 66.67	-1	4252141..4252785	-	214	153006477	-	Anae109_3638	-	YceI family protein
3599	 70.67	0	4252782..4253330	-	182	153006478	-	Anae109_3639	-	YceI family protein
3600	 73.36	0	4253446..4254342	+	298	153006479	-	Anae109_3640	-	LysR family transcriptional regulator
3601	 72.47	0	4254671..4255669	+	332	153006480	-	Anae109_3641	-	hypothetical protein
3602	 74.67	0	4255774..4256223	-	149	153006481	-	Anae109_3642	-	protein tyrosine phosphatase
3603	 68.32	-1	4256220..4257365	-	381	153006482	-	Anae109_3643	-	arsenical-resistance protein
3604	 73.02	0	4257375..4257815	-	146	153006483	-	Anae109_3644	-	regulatory protein ArsR
3605	 70.10	0	4257879..4258286	+	135	153006484	-	Anae109_3645	-	thioredoxin domain-containing protein
3606	 74.96	0	4258296..4258994	+	232	153006485	-	Anae109_3646	-	cytochrome c biogenesis protein transmembrane region
3607	 70.50	0	4259029..4260123	+	364	153006486	-	Anae109_3647	-	permease
3608	 68.80	-1	4260135..4260368	+	77	153006487	-	Anae109_3648	-	redox-active disulfide protein 2
3609	 72.58	0	4260455..4261384	-	309	153006488	-	Anae109_3649	-	hypothetical protein
3610	 71.59	0	4261860..4262489	-	209	153006489	-	Anae109_3650	-	pyridoxamine 5'-phosphate oxidase-related FMN-binding
3611	 74.82	0	4262555..4263106	-	183	153006490	-	Anae109_3651	-	alkylhydroperoxidase
3612	 72.97	0	4263908..4264795	-	295	153006491	-	Anae109_3652	-	putative adenylate/guanylate cyclase
3613	 72.94	0	4264822..4265538	-	238	153006492	-	Anae109_3653	-	phosphodiesterase
3614	 72.79	0	4266136..4266951	+	271	153006493	-	Anae109_3654	-	hypothetical protein
3615	 73.46	0	4267040..4267819	-	259	153006494	-	Anae109_3655	-	short-chain dehydrogenase/reductase SDR
3616	 73.56	0	4267871..4268494	+	207	153006495	-	Anae109_3656	-	TetR family transcriptional regulator
3617	 72.98	0	4269010..4270038	-	342	153006496	-	Anae109_3657	-	LysR family transcriptional regulator
3618	 70.73	0	4270115..4271050	+	311	153006497	-	Anae109_3658	-	alpha/beta hydrolase fold
3619	 73.56	0	4271165..4271962	+	265	153006498	-	Anae109_3659	-	hypothetical protein
3620	 72.22	0	4272209..4272928	-	239	153006499	-	Anae109_3660	-	beta-lactamase domain-containing protein
3621	 74.05	0	4272900..4273820	-	306	153006500	-	Anae109_3661	-	TetR family transcriptional regulator
3622	 65.58	-2	4274126..4274584	+	152	153006501	-	Anae109_3662	-	activator of Hsp90 ATPase 1 family protein
3623	 68.04	-1	4274691..4275128	-	145	153006502	-	Anae109_3663	-	hypothetical protein
3624	 73.29	0	4275257..4276147	+	296	153006503	-	Anae109_3664	-	LysR family transcriptional regulator
3625	 75.57	0	4276402..4276884	+	160	153006504	-	Anae109_3665	-	hypothetical protein
3626	 66.67	-1	4277316..4277663	+	115	153006505	-	Anae109_3666	-	GYD family protein
3627	 73.68	0	4278039..4280789	+	916	153006506	-	Anae109_3667	-	ATPase-like protein
3628	 73.00	0	4281249..4282874	+	541	153006507	-	Anae109_3668	-	response regulator receiver protein
3629	 72.31	0	4283013..4283933	+	306	153006508	-	Anae109_3669	-	alpha/beta hydrolase fold
3630	 65.89	-1	4284242..4284625	-	127	153006509	-	Anae109_3670	-	hypothetical protein
3631	 77.54	+1	4284868..4285152	+	94	153006510	-	Anae109_3671	-	hypothetical protein
3632	 77.50	+1	4285182..4285892	+	236	153006511	-	Anae109_3672	-	glutamine amidotransferase class-I
3633	 64.10	-2	4286112..4286423	-	103	153006512	-	Anae109_3673	-	helix-turn-helix domain-containing protein
3634	 64.69	-2	4286420..4286773	-	117	153006513	-	Anae109_3674	-	hypothetical protein
3635	 69.72	0	4286823..4287182	+	119	153006514	-	Anae109_3675	-	hypothetical protein
3636	 71.83	0	4287301..4287687	+	128	153006515	-	Anae109_3676	-	hypothetical protein
3637	 65.40	-2	4287691..4288086	+	131	153006516	-	Anae109_3677	-	IS66 Orf2 family protein
3638	 68.02	-1	4288106..4289653	+	515	153006517	-	Anae109_3678	-	transposase IS66
3639	 67.37	-1	4290307..4294293	-	1328	153006518	-	Anae109_3679	-	hypothetical protein
3640	 64.42	-2	4294334..4294600	+	88	153006519	-	Anae109_3680	-	hypothetical protein
3641	 67.64	-1	4294616..4295131	+	171	153006520	-	Anae109_3681	-	hypothetical protein
3642	 77.31	+1	4295824..4297035	+	403	153006521	-	Anae109_3683	-	glycosyl transferase family protein
3643	 67.76	-1	4296933..4297667	-	244	153006522	-	Anae109_3684	-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
3644	 78.02	+1	4297664..4299151	-	495	153006523	-	Anae109_3685	-	TPR repeat-containing protein
3645	 72.86	0	4299156..4299785	-	209	153006524	-	Anae109_3686	-	lytic transglycosylase catalytic
73.23	MEAN

3.77	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.