IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter sp. Fw109-5



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 73.23 STD DEV: 3.77
Anaeromyxobacter sp. Fw109-5, complete genome - 1..5277990
4466 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3507	 76.13	0	4152550..4153881	+	443	153006386	-	Anae109_3546	-	ATPase central domain-containing protein
3508	 76.55	0	4153878..4154798	+	306	153006387	-	Anae109_3547	-	TPR repeat-containing protein
3509	 71.77	0	4154998..4159839	+	1613	153006388	-	Anae109_3548	-	APHP domain-containing protein
3510	 74.65	0	4159930..4160430	-	166	153006389	-	Anae109_3549	-	methylated-DNA--protein-cysteine methyltransferase
3511	 79.01	+1	4160427..4161884	-	485	153006390	-	Anae109_3550	-	alcohol dehydrogenase
3512	 77.39	+1	4162123..4162803	+	226	153006391	-	Anae109_3551	-	hypothetical protein
3513	 68.72	-1	4163155..4166808	+	1217	153006392	-	Anae109_3552	-	DNA polymerase III, alpha subunit
3514	 77.50	+1	4166858..4167337	-	159	153006393	-	Anae109_3553	-	hypothetical protein
3515	 77.65	+1	4167334..4168116	-	260	153006394	-	Anae109_3554	-	GCN5-related N-acetyltransferase
3516	 71.56	0	4168498..4169028	+	176	153006395	-	Anae109_3555	-	response regulator receiver protein
3517	 71.45	0	4169158..4170369	+	403	153006396	-	Anae109_3556	-	threonine dehydratase
3518	 74.91	0	4170788..4171357	+	189	153006397	-	Anae109_3557	-	ECF subfamily RNA polymerase sigma-24 factor
3519	 78.29	+1	4171370..4174672	+	1100	153006398	-	Anae109_3558	-	protein kinase
3520	 78.38	+1	4174669..4175163	+	164	153006399	-	Anae109_3559	-	hypothetical protein
3521	 72.92	0	4175656..4175895	-	79	153006400	-	Anae109_3560	-	hypothetical protein
3522	 77.55	+1	4175903..4177096	-	397	153006401	-	Anae109_3561	-	8-amino-7-oxononanoate synthase
3523	 73.26	0	4177100..4178206	-	368	153006402	-	Anae109_3562	-	biotin synthase
3524	 66.67	-1	4178362..4178514	+	50	153006403	-	Anae109_3563	-	hypothetical protein
3525	 73.33	0	4178606..4178860	-	84	153006404	-	Anae109_3564	-	hypothetical protein
3526	 74.29	0	4178958..4180373	+	471	153006405	-	Anae109_3565	-	DNA repair protein RadA
3527	 72.28	0	4180627..4182105	-	492	153006406	-	Anae109_3566	-	glycerol kinase
3528	 77.36	+1	4182108..4182986	-	292	153006407	-	Anae109_3567	-	alpha/beta hydrolase fold
3529	 67.31	-1	4183088..4183399	+	103	153006408	-	Anae109_3568	-	hypothetical protein
3530	 76.91	0	4183441..4184250	+	269	153006409	-	Anae109_3569	-	periplasmic binding protein
3531	 71.21	0	4184412..4184675	+	87	153006410	-	Anae109_3570	-	hypothetical protein
3532	 77.27	+1	4184672..4185001	+	109	153006411	-	Anae109_3571	-	helix-hairpin-helix DNA-binding motif-containing protein
3533	 76.55	0	4185378..4187339	+	653	153006412	-	Anae109_3572	-	TonB-dependent receptor plug
3534	 75.86	0	4187336..4188868	+	510	153006413	-	Anae109_3573	-	hypothetical protein
3535	 77.81	+1	4188856..4189779	+	307	153006414	-	Anae109_3574	-	periplasmic binding protein
3536	 78.19	+1	4189776..4190816	+	346	153006415	-	Anae109_3575	-	transport system permease protein
3537	 76.86	0	4190813..4191607	+	264	153006416	-	Anae109_3576	-	ABC transporter related
3538	 74.22	0	4191932..4192792	-	286	153006417	-	Anae109_3577	-	hypothetical protein
3539	 73.50	0	4192893..4193243	+	116	153006418	-	Anae109_3578	-	TraR/DksA family transcriptional regulator
3540	 69.73	0	4193308..4194189	+	293	153006419	-	Anae109_3579	-	UTP-glucose-1-phosphate uridylyltransferase
3541	 75.95	0	4194186..4194950	+	254	153006420	-	Anae109_3580	-	hypothetical protein
3542	 72.37	0	4195004..4196476	-	490	153006421	-	Anae109_3581	-	two component, sigma54 specific, Fis family transcriptional regulator
3543	 72.99	0	4196495..4198045	-	516	153006422	-	Anae109_3582	-	multi-sensor signal transduction histidine kinase
3544	 72.24	0	4198214..4199182	-	322	153006423	-	Anae109_3583	-	response regulator receiver modulated diguanylate cyclase
3545	 76.94	0	4199355..4200113	+	252	153006424	-	Anae109_3584	-	hypothetical protein
3546	 77.12	+1	4200073..4200531	-	152	153006425	-	Anae109_3585	-	hypothetical protein
3547	 77.93	+1	4200528..4201868	-	446	153006426	-	Anae109_3586	-	hypothetical protein
3548	 76.77	0	4201923..4202486	+	187	153006427	-	Anae109_3587	-	ATP--cobalamin adenosyltransferase
3549	 77.12	+1	4202483..4203190	+	235	153006428	-	Anae109_3588	-	short-chain dehydrogenase/reductase SDR
3550	 66.15	-1	4203320..4203703	+	127	153006429	-	Anae109_3589	-	iron-sulfur cluster assembly accessory protein
3551	 73.85	0	4203816..4204469	+	217	153006430	-	Anae109_3590	-	beta-lactamase domain-containing protein
3552	 70.55	0	4204581..4205429	-	282	153006431	-	Anae109_3591	-	short-chain dehydrogenase/reductase SDR
3553	 74.55	0	4205434..4205763	-	109	153006432	-	Anae109_3592	-	TPR repeat-containing protein
3554	 77.12	+1	4205851..4206462	+	203	153006433	-	Anae109_3593	-	molybdopterin-guanine dinucleotide biosynthesis protein A
3555	 77.84	+1	4206724..4207242	+	172	153006434	-	Anae109_3594	-	hypothetical protein
3556	 73.93	0	4207239..4210844	+	1201	153006435	-	Anae109_3595	-	nitrate reductase, alpha subunit
3557	 74.97	0	4210854..4212311	+	485	153006436	-	Anae109_3596	-	nitrate reductase, beta subunit
3558	 79.46	+1	4212308..4212862	+	184	153006437	-	Anae109_3597	-	nitrate reductase molybdenum cofactor assembly chaperone
3559	 74.14	0	4212859..4214958	+	699	153006438	-	Anae109_3598	-	nitrite transporter
3560	 73.43	0	4215484..4216311	-	275	153006439	-	Anae109_3599	-	hypothetical protein
3561	 74.88	0	4216502..4216915	-	137	153006440	-	Anae109_3600	-	CrcB protein
3562	 74.30	0	4216993..4217739	+	248	153006441	-	Anae109_3601	-	short-chain dehydrogenase/reductase SDR
3563	 76.26	0	4217769..4218539	-	256	153006442	-	Anae109_3602	-	hypothetical protein
3564	 79.02	+1	4218639..4220006	+	455	153006443	-	Anae109_3603	-	uroporphyrin-III C-methyltransferase
3565	 77.51	+1	4220018..4221862	+	614	153006444	-	Anae109_3604	-	nitrite/sulfite reductase hemoprotein beta subunit
3566	 75.22	0	4222047..4223321	+	424	153006445	-	Anae109_3605	-	threonine synthase
3567	 72.10	0	4223338..4223613	+	91	153006446	-	Anae109_3606	-	thiamineS protein
3568	 71.82	0	4223617..4224780	+	387	153006447	-	Anae109_3607	-	UBA/THIF-type NAD/FAD binding protein
3569	 77.44	+1	4224780..4225754	+	324	153006448	-	Anae109_3608	-	cysteine synthase
3570	 75.37	0	4225751..4226704	+	317	153006449	-	Anae109_3609	-	pyridoxal-5'-phosphate-dependent protein beta subunit
3571	 74.32	0	4226701..4227144	+	147	153006450	-	Anae109_3610	-	hypothetical protein
3572	 71.93	0	4227273..4227899	+	208	153006451	-	Anae109_3611	-	hypothetical protein
3573	 77.28	+1	4227931..4228740	-	269	153006452	-	Anae109_3612	-	hypothetical protein
3574	 69.91	0	4228749..4229765	-	338	153006453	-	Anae109_3613	-	bile acid:sodium symporter
3575	 73.33	0	4230184..4230393	+	69	153006454	-	Anae109_3614	-	hypothetical protein
3576	 71.00	0	4230514..4231275	+	253	153006455	-	Anae109_3615	-	hypothetical protein
3577	 77.07	+1	4231299..4231865	-	188	153006456	-	Anae109_3616	-	methyltransferase type 11
3578	 74.83	0	4232665..4233828	-	387	153006457	-	Anae109_3617	-	peptidase M24
3579	 71.98	0	4233905..4235164	-	419	153006458	-	Anae109_3618	-	hypothetical protein
3580	 75.67	0	4235342..4235641	+	99	153006459	-	Anae109_3619	-	hypothetical protein
3581	 78.83	+1	4235697..4236296	-	199	153006460	-	Anae109_3620	-	hypothetical protein
3582	 70.74	0	4236293..4236562	-	89	153006461	-	Anae109_3621	-	putative transmembrane anti-sigma factor
3583	 74.43	0	4236559..4237215	-	218	153006462	-	Anae109_3622	-	ECF subfamily RNA polymerase sigma-24 factor
3584	 74.25	0	4237925..4239295	+	456	153006463	-	Anae109_3623	-	pyridine nucleotide-disulphide oxidoreductase dimerisation region
3585	 80.80	+2	4239640..4240389	-	249	153006464	-	Anae109_3624	-	hypothetical protein
3586	 73.37	0	4240386..4240952	-	188	153006465	-	Anae109_3625	-	ECF subfamily RNA polymerase sigma-24 factor
3587	 72.61	0	4241068..4241706	+	212	153006466	-	Anae109_3626	-	methionine-R-sulfoxide reductase
3588	 72.88	0	4241703..4242362	+	219	153006467	-	Anae109_3627	-	peptide methionine sulfoxide reductase
3589	 74.18	0	4242421..4243125	-	234	153006468	-	Anae109_3628	-	oxidoreductase molybdopterin binding
3590	 73.18	0	4243122..4243781	-	219	153006469	-	Anae109_3629	-	hypothetical protein
3591	 70.37	0	4243887..4244399	-	170	153006470	-	Anae109_3630	-	hypothetical protein
3592	 72.40	0	4244603..4244986	-	127	153006471	-	Anae109_3631	-	response regulator receiver protein
3593	 73.70	0	4244983..4246248	-	421	153006472	-	Anae109_3632	-	histidine kinase
3594	 74.98	0	4246245..4247423	-	392	153006473	-	Anae109_3633	-	glycosyltransferase
3595	 69.62	0	4248173..4248511	-	112	153006474	-	Anae109_3635	-	nitrogen regulatory protein P-II
3596	 70.13	0	4248882..4250411	+	509	153006475	-	Anae109_3636	-	ammonium transporter
3597	 73.49	0	4250572..4252065	+	497	153006476	-	Anae109_3637	-	glycosyl transferase group 1
3598	 66.67	-1	4252141..4252785	-	214	153006477	-	Anae109_3638	-	YceI family protein
3599	 70.67	0	4252782..4253330	-	182	153006478	-	Anae109_3639	-	YceI family protein
3600	 73.36	0	4253446..4254342	+	298	153006479	-	Anae109_3640	-	LysR family transcriptional regulator
3601	 72.47	0	4254671..4255669	+	332	153006480	-	Anae109_3641	-	hypothetical protein
3602	 74.67	0	4255774..4256223	-	149	153006481	-	Anae109_3642	-	protein tyrosine phosphatase
3603	 68.32	-1	4256220..4257365	-	381	153006482	-	Anae109_3643	-	arsenical-resistance protein
3604	 73.02	0	4257375..4257815	-	146	153006483	-	Anae109_3644	-	regulatory protein ArsR
3605	 70.10	0	4257879..4258286	+	135	153006484	-	Anae109_3645	-	thioredoxin domain-containing protein
3606	 74.96	0	4258296..4258994	+	232	153006485	-	Anae109_3646	-	cytochrome c biogenesis protein transmembrane region
73.23	MEAN

3.77	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.