IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter sp. Fw109-5



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 73.23 STD DEV: 3.77
Anaeromyxobacter sp. Fw109-5, complete genome - 1..5277990
4466 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3470	 75.17	0	4112296..4112742	+	148	153006349	-	Anae109_3507	-	hypothetical protein
3471	 69.09	-1	4112839..4113333	+	164	153006350	-	Anae109_3508	-	asparaginase
3472	 75.65	0	4113397..4114287	+	296	153006351	-	Anae109_3509	-	glutathione S-transferase-like protein
3473	 75.39	0	4114363..4115577	+	404	153006352	-	Anae109_3510	-	hypothetical protein
3474	 73.21	0	4115775..4116278	+	167	153006353	-	Anae109_3511	-	hypothetical protein
3475	 75.80	0	4116310..4116747	+	145	153006354	-	Anae109_3512	-	hypothetical protein
3476	 76.40	0	4116842..4117447	-	201	153006355	-	Anae109_3513	-	CDP-alcohol phosphatidyltransferase
3477	 71.92	0	4117594..4117974	+	126	153006356	-	Anae109_3514	-	hypothetical protein
3478	 70.72	0	4121518..4121961	+	147	153006357	-	Anae109_3517	-	hypothetical protein
3479	 72.97	0	4122091..4122693	-	200	153006358	-	Anae109_3518	-	alpha/beta hydrolase fold
3480	 71.29	0	4123045..4123542	+	165	153006359	-	Anae109_3519	-	hypothetical protein
3481	 70.89	0	4123615..4125318	-	567	153006360	-	Anae109_3520	-	nickel-dependent hydrogenase large subunit
3482	 71.26	0	4125315..4126532	-	405	153006361	-	Anae109_3521	-	polysulphide reductase NrfD
3483	 75.28	0	4126529..4127410	-	293	153006362	-	Anae109_3522	-	hydrogenase 2 protein HybA
3484	 73.42	0	4127414..4128523	-	369	153006363	-	Anae109_3523	-	hydrogenase (NiFe) small subunit HydA
3485	 72.80	0	4128786..4129991	-	401	153006364	-	Anae109_3524	-	polysulphide reductase NrfD
3486	 74.40	0	4130366..4131451	-	361	153006365	-	Anae109_3525	-	BNR repeat-containing glycosyl hydrolase
3487	 70.71	0	4131458..4131754	-	98	153006366	-	Anae109_3526	-	thiamineS
3488	 72.94	0	4131857..4132780	-	307	153006367	-	Anae109_3527	-	OmpA/MotB domain-containing protein
3489	 69.59	0	4133013..4133456	+	147	153006368	-	Anae109_3528	-	hypothetical protein
3490	 77.22	+1	4133603..4135345	+	580	153006369	-	Anae109_3529	-	hypothetical protein
3491	 74.42	0	4135633..4137282	-	549	153006370	-	Anae109_3530	-	hypothetical protein
3492	 71.15	0	4137300..4137767	-	155	153006371	-	Anae109_3531	-	hypothetical protein
3493	 78.62	+1	4137764..4138876	-	370	153006372	-	Anae109_3532	-	response regulator receiver modulated CheB methylesterase
3494	 77.92	+1	4138873..4141299	-	808	153006373	-	Anae109_3533	-	CheA signal transduction histidine kinase
3495	 75.78	0	4141302..4141817	-	171	153006374	-	Anae109_3534	-	putative CheW protein
3496	 72.35	0	4141814..4142218	-	134	153006375	-	Anae109_3535	-	response regulator receiver protein
3497	 76.14	0	4142215..4143459	-	414	153006376	-	Anae109_3536	-	methyl-accepting chemotaxis sensory transducer
3498	 76.58	0	4143456..4143899	-	147	153006377	-	Anae109_3537	-	putative CheW protein
3499	 70.00	0	4144052..4144921	-	289	153006378	-	Anae109_3538	-	periplasmic binding protein-related protein
3500	 73.35	0	4144938..4146644	-	568	153006379	-	Anae109_3539	-	methyl-accepting chemotaxis sensory transducer
3501	 67.50	-1	4146966..4148282	+	438	153006380	-	Anae109_3540	-	hypothetical protein
3502	 70.70	0	4148529..4149446	+	305	153006381	-	Anae109_3541	-	LigA
3503	 69.75	0	4149330..4150043	-	237	153006382	-	Anae109_3542	-	hypothetical protein
3504	 76.79	0	4150219..4150890	+	223	153006383	-	Anae109_3543	-	TetR family transcriptional regulator
3505	 77.12	+1	4150897..4151556	+	219	153006384	-	Anae109_3544	-	hypothetical protein
3506	 73.26	0	4151642..4152490	+	282	153006385	-	Anae109_3545	-	protein of unknown function zinc metallopeptidase putative
3507	 76.13	0	4152550..4153881	+	443	153006386	-	Anae109_3546	-	ATPase central domain-containing protein
3508	 76.55	0	4153878..4154798	+	306	153006387	-	Anae109_3547	-	TPR repeat-containing protein
3509	 71.77	0	4154998..4159839	+	1613	153006388	-	Anae109_3548	-	APHP domain-containing protein
3510	 74.65	0	4159930..4160430	-	166	153006389	-	Anae109_3549	-	methylated-DNA--protein-cysteine methyltransferase
3511	 79.01	+1	4160427..4161884	-	485	153006390	-	Anae109_3550	-	alcohol dehydrogenase
3512	 77.39	+1	4162123..4162803	+	226	153006391	-	Anae109_3551	-	hypothetical protein
3513	 68.72	-1	4163155..4166808	+	1217	153006392	-	Anae109_3552	-	DNA polymerase III, alpha subunit
3514	 77.50	+1	4166858..4167337	-	159	153006393	-	Anae109_3553	-	hypothetical protein
3515	 77.65	+1	4167334..4168116	-	260	153006394	-	Anae109_3554	-	GCN5-related N-acetyltransferase
3516	 71.56	0	4168498..4169028	+	176	153006395	-	Anae109_3555	-	response regulator receiver protein
3517	 71.45	0	4169158..4170369	+	403	153006396	-	Anae109_3556	-	threonine dehydratase
3518	 74.91	0	4170788..4171357	+	189	153006397	-	Anae109_3557	-	ECF subfamily RNA polymerase sigma-24 factor
3519	 78.29	+1	4171370..4174672	+	1100	153006398	-	Anae109_3558	-	protein kinase
3520	 78.38	+1	4174669..4175163	+	164	153006399	-	Anae109_3559	-	hypothetical protein
3521	 72.92	0	4175656..4175895	-	79	153006400	-	Anae109_3560	-	hypothetical protein
3522	 77.55	+1	4175903..4177096	-	397	153006401	-	Anae109_3561	-	8-amino-7-oxononanoate synthase
3523	 73.26	0	4177100..4178206	-	368	153006402	-	Anae109_3562	-	biotin synthase
3524	 66.67	-1	4178362..4178514	+	50	153006403	-	Anae109_3563	-	hypothetical protein
3525	 73.33	0	4178606..4178860	-	84	153006404	-	Anae109_3564	-	hypothetical protein
3526	 74.29	0	4178958..4180373	+	471	153006405	-	Anae109_3565	-	DNA repair protein RadA
3527	 72.28	0	4180627..4182105	-	492	153006406	-	Anae109_3566	-	glycerol kinase
3528	 77.36	+1	4182108..4182986	-	292	153006407	-	Anae109_3567	-	alpha/beta hydrolase fold
3529	 67.31	-1	4183088..4183399	+	103	153006408	-	Anae109_3568	-	hypothetical protein
3530	 76.91	0	4183441..4184250	+	269	153006409	-	Anae109_3569	-	periplasmic binding protein
3531	 71.21	0	4184412..4184675	+	87	153006410	-	Anae109_3570	-	hypothetical protein
3532	 77.27	+1	4184672..4185001	+	109	153006411	-	Anae109_3571	-	helix-hairpin-helix DNA-binding motif-containing protein
3533	 76.55	0	4185378..4187339	+	653	153006412	-	Anae109_3572	-	TonB-dependent receptor plug
3534	 75.86	0	4187336..4188868	+	510	153006413	-	Anae109_3573	-	hypothetical protein
3535	 77.81	+1	4188856..4189779	+	307	153006414	-	Anae109_3574	-	periplasmic binding protein
3536	 78.19	+1	4189776..4190816	+	346	153006415	-	Anae109_3575	-	transport system permease protein
3537	 76.86	0	4190813..4191607	+	264	153006416	-	Anae109_3576	-	ABC transporter related
3538	 74.22	0	4191932..4192792	-	286	153006417	-	Anae109_3577	-	hypothetical protein
3539	 73.50	0	4192893..4193243	+	116	153006418	-	Anae109_3578	-	TraR/DksA family transcriptional regulator
3540	 69.73	0	4193308..4194189	+	293	153006419	-	Anae109_3579	-	UTP-glucose-1-phosphate uridylyltransferase
3541	 75.95	0	4194186..4194950	+	254	153006420	-	Anae109_3580	-	hypothetical protein
3542	 72.37	0	4195004..4196476	-	490	153006421	-	Anae109_3581	-	two component, sigma54 specific, Fis family transcriptional regulator
3543	 72.99	0	4196495..4198045	-	516	153006422	-	Anae109_3582	-	multi-sensor signal transduction histidine kinase
3544	 72.24	0	4198214..4199182	-	322	153006423	-	Anae109_3583	-	response regulator receiver modulated diguanylate cyclase
3545	 76.94	0	4199355..4200113	+	252	153006424	-	Anae109_3584	-	hypothetical protein
3546	 77.12	+1	4200073..4200531	-	152	153006425	-	Anae109_3585	-	hypothetical protein
3547	 77.93	+1	4200528..4201868	-	446	153006426	-	Anae109_3586	-	hypothetical protein
3548	 76.77	0	4201923..4202486	+	187	153006427	-	Anae109_3587	-	ATP--cobalamin adenosyltransferase
3549	 77.12	+1	4202483..4203190	+	235	153006428	-	Anae109_3588	-	short-chain dehydrogenase/reductase SDR
3550	 66.15	-1	4203320..4203703	+	127	153006429	-	Anae109_3589	-	iron-sulfur cluster assembly accessory protein
3551	 73.85	0	4203816..4204469	+	217	153006430	-	Anae109_3590	-	beta-lactamase domain-containing protein
3552	 70.55	0	4204581..4205429	-	282	153006431	-	Anae109_3591	-	short-chain dehydrogenase/reductase SDR
3553	 74.55	0	4205434..4205763	-	109	153006432	-	Anae109_3592	-	TPR repeat-containing protein
3554	 77.12	+1	4205851..4206462	+	203	153006433	-	Anae109_3593	-	molybdopterin-guanine dinucleotide biosynthesis protein A
3555	 77.84	+1	4206724..4207242	+	172	153006434	-	Anae109_3594	-	hypothetical protein
3556	 73.93	0	4207239..4210844	+	1201	153006435	-	Anae109_3595	-	nitrate reductase, alpha subunit
3557	 74.97	0	4210854..4212311	+	485	153006436	-	Anae109_3596	-	nitrate reductase, beta subunit
3558	 79.46	+1	4212308..4212862	+	184	153006437	-	Anae109_3597	-	nitrate reductase molybdenum cofactor assembly chaperone
3559	 74.14	0	4212859..4214958	+	699	153006438	-	Anae109_3598	-	nitrite transporter
3560	 73.43	0	4215484..4216311	-	275	153006439	-	Anae109_3599	-	hypothetical protein
3561	 74.88	0	4216502..4216915	-	137	153006440	-	Anae109_3600	-	CrcB protein
3562	 74.30	0	4216993..4217739	+	248	153006441	-	Anae109_3601	-	short-chain dehydrogenase/reductase SDR
3563	 76.26	0	4217769..4218539	-	256	153006442	-	Anae109_3602	-	hypothetical protein
3564	 79.02	+1	4218639..4220006	+	455	153006443	-	Anae109_3603	-	uroporphyrin-III C-methyltransferase
3565	 77.51	+1	4220018..4221862	+	614	153006444	-	Anae109_3604	-	nitrite/sulfite reductase hemoprotein beta subunit
3566	 75.22	0	4222047..4223321	+	424	153006445	-	Anae109_3605	-	threonine synthase
3567	 72.10	0	4223338..4223613	+	91	153006446	-	Anae109_3606	-	thiamineS protein
3568	 71.82	0	4223617..4224780	+	387	153006447	-	Anae109_3607	-	UBA/THIF-type NAD/FAD binding protein
3569	 77.44	+1	4224780..4225754	+	324	153006448	-	Anae109_3608	-	cysteine synthase
73.23	MEAN

3.77	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.