IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter sp. Fw109-5



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 73.23 STD DEV: 3.77
Anaeromyxobacter sp. Fw109-5, complete genome - 1..5277990
4466 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3352	 70.20	0	3980527..3981291	-	254	153006231	-	Anae109_3388	-	hypothetical protein
3353	 68.88	-1	3981288..3982145	-	285	153006232	-	Anae109_3389	-	hypothetical protein
3354	 70.13	0	3982304..3982822	+	172	153006233	-	Anae109_3390	-	hypothetical protein
3355	 74.36	0	3982819..3983286	+	155	153006234	-	Anae109_3391	-	hypothetical protein
3356	 68.31	-1	3983330..3983695	-	121	153006235	-	Anae109_3392	-	type IV pilus assembly PilZ
3357	 82.29	+2	3983755..3986064	+	769	153006236	-	Anae109_3393	-	putative Vgr-related protein
3358	 71.72	0	3986158..3986553	+	131	153006237	-	Anae109_3394	-	hypothetical protein
3359	 72.48	0	3986610..3987125	+	171	153006238	-	Anae109_3395	-	hypothetical protein
3360	 74.69	0	3987142..3988113	-	323	153006239	-	Anae109_3396	-	homoserine kinase
3361	 77.84	+1	3988155..3988664	-	169	153006240	-	Anae109_3397	-	hypothetical protein
3362	 69.21	-1	3988800..3989624	+	274	153006241	-	Anae109_3398	-	TPR repeat-containing protein
3363	 75.03	0	3989731..3991404	+	557	153006242	-	Anae109_3399	-	sigma-54 dependent trancsriptional regulator
3364	 73.57	0	3991622..3992794	-	390	153006243	-	Anae109_3400	-	HNH endonuclease
3365	 79.36	+1	3993421..3994413	-	330	153006244	-	Anae109_3401	-	hypothetical protein
3366	 72.37	0	3994677..3995552	-	291	153006245	-	Anae109_3402	-	Tol-Pal system YbgF
3367	 69.82	0	3995555..3996379	-	274	153006246	-	Anae109_3403	-	OmpA/MotB domain-containing protein
3368	 72.37	0	3996393..3997760	+	455	153006247	-	Anae109_3404	-	two component, sigma54 specific, Fis family transcriptional regulator
3369	 74.13	0	3998080..4000653	+	857	153006248	-	Anae109_3405	-	1A family penicillin-binding protein
3370	 80.72	+1	4000677..4002092	+	471	153006249	-	Anae109_3406	-	FG-GAP repeat-containing protein
3371	 81.48	+2	4002089..4003546	+	485	153006250	-	Anae109_3407	-	extracellular solute-binding protein
3372	 79.97	+1	4003543..4005264	+	573	153006251	-	Anae109_3408	-	histidine kinase
3373	 79.55	+1	4005398..4007035	-	545	153006252	-	Anae109_3409	-	hypothetical protein
3374	 76.84	0	4007103..4008281	-	392	153006253	-	Anae109_3410	-	aminotransferase class I and II
3375	 70.31	0	4008368..4010509	+	713	153006254	-	Anae109_3411	-	hypothetical protein
3376	 72.38	0	4010639..4012021	+	460	153006255	-	Anae109_3412	-	xanthine/uracil/vitamin C permease
3377	 68.36	-1	4012043..4013047	-	334	153006256	-	Anae109_3413	-	quinolinate synthetase
3378	 71.83	0	4013044..4013256	-	70	153006257	-	Anae109_3414	-	hypothetical protein
3379	 81.90	+2	4013316..4014083	+	255	153006258	-	Anae109_3415	-	hypothetical protein
3380	 70.17	0	4014135..4014848	-	237	153006259	-	Anae109_3416	-	putative two-component response-regulatory protein YehT
3381	 71.79	0	4014845..4016524	-	559	153006260	-	Anae109_3417	-	signal transduction histidine kinase, LytS
3382	 66.09	-1	4016900..4019332	-	810	153006261	-	Anae109_3418	-	ATP-dependent protease La
3383	 76.28	0	4019623..4021338	+	571	153006262	-	Anae109_3419	-	aminotransferase class V
3384	 65.70	-2	4021415..4022653	-	412	153006263	-	Anae109_3420	-	ATP-dependent protease ATP-binding subunit
3385	 64.88	-2	4022734..4023348	-	204	153006264	-	Anae109_3421	-	ATP-dependent Clp protease, proteolytic subunit ClpP
3386	 70.61	0	4023361..4024653	-	430	153006265	-	Anae109_3422	-	trigger factor
3387	 71.32	0	4024880..4025287	+	135	153006266	-	Anae109_3423	-	hypothetical protein
3388	 76.48	0	4026125..4026817	-	230	153006267	-	Anae109_3424	-	Ham1 family protein
3389	 74.34	0	4026823..4027539	-	238	153006268	-	Anae109_3425	-	ribonuclease PH
3390	 75.23	0	4027594..4028340	-	248	153006269	-	Anae109_3426	-	N-acetylmuramoyl-L-alanine amidase
3391	 74.97	0	4028480..4029430	-	316	153006270	-	Anae109_3427	-	selenide, water dikinase
3392	 70.78	0	4029577..4030329	-	250	153006271	-	Anae109_3428	-	TPR repeat-containing protein
3393	 77.57	+1	4030355..4031161	-	268	153006272	-	Anae109_3429	-	hypothetical protein
3394	 69.50	0	4031145..4031921	-	258	153006273	-	Anae109_3430	-	tetratricopeptide domain-containing protein
3395	 82.83	+2	4031981..4032475	-	164	153006274	-	Anae109_3431	-	putative RecX protein
3396	 76.79	0	4032549..4033022	-	157	153006275	-	Anae109_3432	-	hypothetical protein
3397	 70.09	0	4033129..4034442	-	437	153006276	-	Anae109_3433	-	twitching motility protein
3398	 80.24	+1	4034475..4035557	-	360	153006277	-	Anae109_3434	-	hypothetical protein
3399	 73.40	0	4035671..4036933	+	420	153006278	-	Anae109_3435	-	phospholipase D/transphosphatidylase
3400	 69.19	-1	4037003..4037398	-	131	153006279	-	Anae109_3436	-	ribosomal protein S9
3401	 67.33	-1	4037408..4037857	-	149	153006280	-	Anae109_3437	-	50S ribosomal protein L13
3402	 75.26	0	4038083..4039048	+	321	153006281	-	Anae109_3438	-	peptidase M28
3403	 73.42	0	4039083..4039319	-	78	153006282	-	Anae109_3439	-	hypothetical protein
3404	 73.50	0	4039550..4041598	-	682	153006283	-	Anae109_3440	-	UvrD/REP helicase
3405	 71.49	0	4041773..4043554	+	593	153006284	-	Anae109_3441	-	peptidase U34 dipeptidase
3406	 79.28	+1	4043704..4044591	-	295	153006285	-	Anae109_3442	-	RluA family pseudouridine synthase
3407	 74.26	0	4044734..4045918	+	394	153006286	-	Anae109_3443	-	hypothetical protein
3408	 71.45	0	4046089..4047468	+	459	153006287	-	Anae109_3444	-	hypothetical protein
3409	 71.50	0	4047479..4048636	+	385	153006288	-	Anae109_3445	-	hypothetical protein
3410	 76.70	0	4048652..4050514	+	620	153006289	-	Anae109_3446	-	ABC transporter related
3411	 70.27	0	4050547..4051128	+	193	153006290	-	Anae109_3447	-	hypothetical protein
3412	 79.53	+1	4051150..4052136	+	328	153006291	-	Anae109_3448	-	peptidase M23B
3413	 74.94	0	4052123..4053028	-	301	153006292	-	Anae109_3449	-	inositol-phosphate phosphatase
3414	 76.40	0	4053134..4053934	+	266	153006293	-	Anae109_3450	-	hypothetical protein
3415	 76.21	0	4053950..4054651	+	233	153006294	-	Anae109_3451	-	hypothetical protein
3416	 72.50	0	4054664..4056823	+	719	153006295	-	Anae109_3452	-	hypothetical protein
3417	 71.13	0	4056915..4057205	+	96	153006296	-	Anae109_3453	-	hypothetical protein
3418	 74.86	0	4057209..4058978	+	589	153006297	-	Anae109_3454	-	histone deacetylase superfamily protein
3419	 75.54	0	4058999..4059505	-	168	153006298	-	Anae109_3455	-	alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
3420	 71.10	0	4059744..4061075	+	443	153006299	-	Anae109_3456	-	hypothetical protein
3421	 70.98	0	4061075..4062118	+	347	153006300	-	Anae109_3457	-	hypothetical protein
3422	 73.61	0	4062251..4063792	-	513	153006301	-	Anae109_3458	-	UDP-N-acetylmuramate
3423	 78.99	+1	4063758..4064942	-	394	153006302	-	Anae109_3459	-	beta-lactamase
3424	 77.35	+1	4064939..4065874	-	311	153006303	-	Anae109_3460	-	peptidase U61 LD-carboxypeptidase A
3425	 68.04	-1	4066122..4068017	+	631	153006304	-	Anae109_3461	-	acetate--CoA ligase
3426	 71.12	0	4068044..4069300	+	418	153006305	-	Anae109_3462	-	hypothetical protein
3427	 71.31	0	4069297..4070028	+	243	153006306	-	Anae109_3463	-	peptidylprolyl isomerase FKBP-type
3428	 73.58	0	4070155..4070805	+	216	153006307	-	Anae109_3464	-	glutathione S-transferase domain-containing protein
3429	 72.71	0	4070904..4071350	+	148	153006308	-	Anae109_3465	-	pyridoxamine 5'-phosphate oxidase-related FMN-binding
3430	 74.50	0	4071364..4072473	-	369	153006309	-	Anae109_3466	-	methyl-accepting chemotaxis sensory transducer
3431	 73.08	0	4072588..4073382	-	264	153006310	-	Anae109_3467	-	hypothetical protein
3432	 71.35	0	4073490..4076096	+	868	153006311	-	Anae109_3468	-	DEAD/DEAH box helicase domain-containing protein
3433	 77.19	+1	4076100..4076840	-	246	153006312	-	Anae109_3469	-	hypothetical protein
3434	 71.64	0	4076901..4077242	+	113	153006313	-	Anae109_3470	-	hypothetical protein
3435	 77.10	+1	4077163..4077756	-	197	153006314	-	Anae109_3471	-	hypothetical protein
3436	 77.40	+1	4078288..4078641	+	117	153006315	-	Anae109_3472	-	hypothetical protein
3437	 78.05	+1	4078666..4079034	-	122	153006316	-	Anae109_3473	-	class I peptide chain release factor
3438	 71.96	0	4079217..4080803	+	528	153006317	-	Anae109_3474	-	transglutaminase domain-containing protein
3439	 77.13	+1	4080800..4081774	+	324	153006318	-	Anae109_3475	-	hypothetical protein
3440	 78.74	+1	4081771..4083675	+	634	153006319	-	Anae109_3476	-	TPR repeat-containing protein
3441	 73.75	0	4083693..4084892	+	399	153006320	-	Anae109_3477	-	hypothetical protein
3442	 74.04	0	4084906..4086099	+	397	153006321	-	Anae109_3478	-	hypothetical protein
3443	 80.37	+1	4086161..4086919	+	252	153006322	-	Anae109_3479	-	methyltransferase type 11
3444	 75.92	0	4087746..4088912	-	388	153006323	-	Anae109_3481	-	hypothetical protein
3445	 75.18	0	4089038..4090012	+	324	153006324	-	Anae109_3482	-	fumarylacetoacetate (FAA) hydrolase
3446	 72.70	0	4090009..4090671	+	220	153006325	-	Anae109_3483	-	maleylacetoacetate isomerase
3447	 71.51	0	4090668..4091843	+	391	153006326	-	Anae109_3484	-	4-hydroxyphenylpyruvate dioxygenase
3448	 73.83	0	4091846..4093003	+	385	153006327	-	Anae109_3485	-	homogentisate 12-dioxygenase
3449	 73.02	0	4092915..4093733	-	272	153006328	-	Anae109_3486	-	hypothetical protein
3450	 76.90	0	4093857..4095038	+	393	153006329	-	Anae109_3487	-	alanine racemase
3451	 69.46	-1	4095053..4095481	-	142	153006330	-	Anae109_3488	-	CBS domain-containing protein
73.23	MEAN

3.77	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.