IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter sp. Fw109-5



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 73.23 STD DEV: 3.77
Anaeromyxobacter sp. Fw109-5, complete genome - 1..5277990
4466 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2934	 69.67	0	3426845..3427177	-	110	153005813	-	Anae109_2955	-	hypothetical protein
2935	 76.19	0	3427257..3428012	+	251	153005814	-	Anae109_2956	-	hypothetical protein
2936	 73.45	0	3428165..3429343	+	392	153005815	-	Anae109_2957	-	aminotransferase class V
2937	 78.10	+1	3429926..3431359	+	477	153005816	-	Anae109_2958	-	hypothetical protein
2938	 80.12	+1	3431366..3432547	-	393	153005817	-	Anae109_2959	-	RND family efflux transporter MFP subunit
2939	 76.83	0	3432550..3434910	-	786	153005818	-	Anae109_2960	-	hypothetical protein
2940	 72.66	0	3434907..3435623	-	238	153005819	-	Anae109_2961	-	ABC transporter related
2941	 72.33	0	3435790..3437220	-	476	153005820	-	Anae109_2962	-	hypothetical protein
2942	 72.01	0	3437417..3440749	+	1110	153005821	-	Anae109_2963	-	malate synthase
2943	 75.34	0	3440876..3442108	+	410	153005822	-	Anae109_2964	-	hypothetical protein
2944	 73.61	0	3442119..3442838	+	239	153005823	-	Anae109_2965	-	hypothetical protein
2945	 76.62	0	3442848..3444374	+	508	153005824	-	Anae109_2966	-	4-alpha-glucanotransferase
2946	 70.21	0	3444395..3444733	-	112	153005825	-	Anae109_2967	-	hypothetical protein
2947	 67.57	-1	3444952..3446613	-	553	153005826	-	Anae109_2968	-	trehalose synthase
2948	 72.20	0	3446752..3447384	+	210	153005827	-	Anae109_2969	-	hypothetical protein
2949	 72.52	0	3447387..3447950	+	187	153005828	-	Anae109_2970	-	signal-transduction protein
2950	 75.59	0	3448316..3449413	+	365	153005829	-	Anae109_2971	-	NAD(P)(+) transhydrogenase (AB-specific)
2951	 66.01	-1	3449425..3449727	+	100	153005830	-	Anae109_2972	-	pyridine nucleotide transhydrogenase alpha subunit-like protein
2952	 68.68	-1	3449724..3451112	+	462	153005831	-	Anae109_2973	-	NAD(P)(+) transhydrogenase (AB-specific)
2953	 71.98	0	3451286..3452338	+	350	153005832	-	Anae109_2974	-	alcohol dehydrogenase
2954	 70.37	0	3452434..3452892	-	152	153005833	-	Anae109_2975	-	hypothetical protein
2955	 76.50	0	3453173..3453874	+	233	153005834	-	Anae109_2976	-	histidine kinase
2956	 73.49	0	3454002..3455525	+	507	153005835	-	Anae109_2977	-	peptidase S41
2957	 76.83	0	3455522..3455944	+	140	153005836	-	Anae109_2978	-	hypothetical protein
2958	 74.10	0	3456026..3456415	-	129	153005837	-	Anae109_2979	-	hypothetical protein
2959	 72.39	0	3456579..3457190	+	203	153005838	-	Anae109_2980	-	TetR family transcriptional regulator
2960	 78.11	+1	3457282..3458391	+	369	153005839	-	Anae109_2981	-	RND family efflux transporter MFP subunit
2961	 70.62	0	3458420..3461506	+	1028	153005840	-	Anae109_2982	-	acriflavin resistance protein
2962	 68.72	-1	3461595..3462179	-	194	153005841	-	Anae109_2983	-	hypothetical protein
2963	 69.17	-1	3462402..3464042	-	546	153005842	-	Anae109_2984	-	acyl-CoA synthetase
2964	 74.59	0	3464145..3465116	-	323	153005843	-	Anae109_2985	-	alcohol dehydrogenase
2965	 77.83	+1	3465236..3466507	+	423	153005844	-	Anae109_2986	-	hypothetical protein
2966	 76.79	0	3466767..3467942	+	391	153005845	-	Anae109_2987	-	hypothetical protein
2967	 69.98	0	3469091..3469513	-	140	153005846	-	Anae109_2990	-	hypothetical protein
2968	 73.85	0	3469498..3471252	-	584	153005847	-	Anae109_2991	-	HNH nuclease
2969	 73.61	0	3471786..3472073	+	95	153005848	-	Anae109_2992	-	rhodanese-like domain-containing protein
2970	 70.66	0	3472335..3473387	-	350	153005849	-	Anae109_2993	-	2-oxoglutarate ferredoxin oxidoreductase subunit beta
2971	 72.76	0	3473389..3475227	-	612	153005850	-	Anae109_2994	-	pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
2972	 70.55	0	3475452..3478901	-	1149	153005851	-	Anae109_2995	-	pyruvate carboxylase
2973	 73.71	0	3479524..3479736	+	70	153005852	-	Anae109_2996	-	methyl-CpG binding protein MBD2-like protein
2974	 76.36	0	3479928..3480866	-	312	153005853	-	Anae109_2997	-	hypothetical protein
2975	 70.83	0	3481088..3481495	-	135	153005854	-	Anae109_2998	-	hemerythrin-like metal-binding protein
2976	 72.96	0	3481644..3485327	+	1227	153005855	-	Anae109_2999	-	FAD linked oxidase domain-containing protein
2977	 66.22	-1	3485537..3486883	+	448	153005856	-	Anae109_3000	-	glutamate dehydrogenase
2978	 78.41	+1	3487018..3488925	-	635	153005857	-	Anae109_3001	-	putative PAS/PAC sensor protein
2979	 78.19	+1	3489033..3490715	+	560	153005858	-	Anae109_3002	-	acyl-CoA dehydrogenase domain-containing protein
2980	 73.05	0	3490847..3492256	-	469	153005859	-	Anae109_3003	-	aldehyde dehydrogenase
2981	 76.96	0	3492295..3492945	+	216	153005860	-	Anae109_3004	-	abortive infection protein
2982	 77.03	+1	3492959..3494608	-	549	153005861	-	Anae109_3005	-	GAF sensor signal transduction histidine kinase
2983	 77.53	+1	3494613..3495680	-	355	153005862	-	Anae109_3006	-	NAD-dependent epimerase/dehydratase
2984	 76.92	0	3495719..3497200	-	493	153005863	-	Anae109_3007	-	DNA photolyase FAD-binding
2985	 73.46	0	3497197..3498153	-	318	153005864	-	Anae109_3008	-	hypothetical protein
2986	 72.41	0	3498234..3499313	-	359	153005865	-	Anae109_3009	-	putative ribonuclease BN
2987	 77.74	+1	3499474..3500457	-	327	153005866	-	Anae109_3010	-	hypothetical protein
2988	 74.85	0	3500691..3502865	-	724	153005867	-	Anae109_3011	-	HAD family hydrolase
2989	 78.73	+1	3502998..3505808	-	936	153005868	-	Anae109_3012	-	DnaK-related protein
2990	 76.92	0	3505812..3507674	-	620	153005869	-	Anae109_3013	-	putative heat-shock chaperone protein
2991	 75.39	0	3507671..3508633	-	320	153005870	-	Anae109_3014	-	hypothetical protein
2992	 69.84	0	3508785..3509036	+	83	153005871	-	Anae109_3015	-	hypothetical protein
2993	 76.13	0	3509356..3510084	+	242	153005872	-	Anae109_3016	-	hypothetical protein
2994	 76.18	0	3510258..3512852	-	864	153005873	-	Anae109_3017	-	PAS/PAC sensor hybrid histidine kinase
2995	 74.50	0	3513146..3514090	+	314	153005874	-	Anae109_3018	-	aldo/keto reductase
2996	 78.28	+1	3514139..3515662	+	507	153005875	-	Anae109_3019	-	ABC transporter related
2997	 76.94	0	3515659..3517371	+	570	153005876	-	Anae109_3020	-	phosphonate ABC transporter, inner membrane subunit
2998	 69.95	0	3517592..3518443	+	283	153005877	-	Anae109_3021	-	phosphonate ABC transporter, periplasmic phosphonate-binding protein
2999	 73.14	0	3519265..3520191	+	308	153005878	-	Anae109_3022	-	HNH endonuclease
3000	 79.09	+1	3520297..3521262	-	321	153005879	-	Anae109_3023	-	methyltransferase type 12
3001	 77.02	+1	3521603..3523090	-	495	153005880	-	Anae109_3024	-	nitrogenase cofactor biosynthesis protein NifB
3002	 68.18	-1	3523098..3523361	-	87	153005881	-	Anae109_3025	-	ferredoxin III 4(4Fe-4S) nif-specific
3003	 75.36	0	3523405..3523818	-	137	153005882	-	Anae109_3026	-	nitrogen fixation protein NifX
3004	 72.73	0	3523834..3526587	-	917	153005883	-	Anae109_3027	-	nitrogenase MoFe cofactor biosynthesis protein NifE
3005	 67.07	-1	3526622..3528091	-	489	153005884	-	Anae109_3028	-	nitrogenase molybdenum-iron protein beta chain
3006	 65.91	-1	3528191..3529642	-	483	153005885	-	Anae109_3029	-	nitrogenase molybdenum-iron protein alpha chain
3007	 67.36	-1	3529750..3530616	-	288	153005886	-	Anae109_3030	-	nitrogenase iron protein
3008	 76.25	0	3530838..3531296	-	152	153005887	-	Anae109_3031	-	GCN5-related N-acetyltransferase
3009	 76.30	0	3531322..3532920	-	532	153005888	-	Anae109_3032	-	NifA subfamily transcriptional regulator
3010	 71.86	0	3533020..3533808	+	262	153005889	-	Anae109_3033	-	NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase
3011	 77.09	+1	3533846..3534766	-	306	153005890	-	Anae109_3034	-	ADP-ribosyl-(dinitrogen reductase) hydrolase
3012	 72.11	0	3534910..3538071	-	1053	153005891	-	Anae109_3035	-	protease domain-containing protein
3013	 75.38	0	3538397..3538660	+	87	153005892	-	Anae109_3036	-	hypothetical protein
3014	 74.79	0	3538786..3540114	+	442	153005893	-	Anae109_3037	-	sodium:neurotransmitter symporter
3015	 72.89	0	3540122..3541534	-	470	153005894	-	Anae109_3038	-	amino acid carrier protein
3016	 73.76	0	3542110..3543039	+	309	153005895	-	Anae109_3039	-	HNH endonuclease
3017	 80.13	+1	3543616..3544410	-	264	153005896	-	Anae109_3040	-	WecB/TagA/CpsF family glycosyl transferase
3018	 75.84	0	3544515..3545375	-	286	153005897	-	Anae109_3041	-	putative formate dehydrogenase formation protein
3019	 70.56	0	3545456..3547690	-	744	153005898	-	Anae109_3042	-	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
3020	 67.69	-1	3547728..3550166	-	812	153005899	-	Anae109_3043	-	formate dehydrogenase
3021	 66.67	-1	3550215..3550790	-	191	153005900	-	Anae109_3044	-	molybdopterin oxidoreductase Fe4S4 region
3022	 77.90	+1	3551130..3553043	-	637	153005901	-	Anae109_3045	-	Fis family GAF modulated sigma54 specific transcriptional regulator
3023	 74.63	0	3553292..3555274	+	660	153005902	-	Anae109_3046	-	putative PAS/PAC sensor protein
3024	 77.97	+1	3555259..3556143	+	294	153005903	-	Anae109_3047	-	formate dehydrogenase family accessory protein FdhD
3025	 75.63	0	3556266..3557135	+	289	153005904	-	Anae109_3048	-	UspA domain-containing protein
3026	 75.25	0	3557190..3563435	-	2081	153005905	-	Anae109_3049	-	cytochrome C family protein
3027	 73.12	0	3564027..3564986	-	319	153005906	-	Anae109_3050	-	aldo/keto reductase
3028	 67.28	-1	3565150..3566772	-	540	153005907	-	Anae109_3051	-	tartrate/fumarate subfamily Fe-S type hydro-lyase beta subunit
3029	 71.10	0	3566927..3567355	-	142	153005908	-	Anae109_3052	-	hemerythrin-like metal-binding protein
3030	 76.69	0	3567515..3568342	-	275	153005909	-	Anae109_3053	-	hypothetical protein
3031	 72.37	0	3568339..3568776	-	145	153005910	-	Anae109_3054	-	hypothetical protein
3032	 73.71	0	3568786..3569154	-	122	153005911	-	Anae109_3055	-	hypothetical protein
3033	 77.46	+1	3569344..3570834	-	496	153005912	-	Anae109_3056	-	substrate-binding region of ABC-type glycine betaine transport system
73.23	MEAN

3.77	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.