IslandPathversion 1.0

IslandPath Analysis: Anaeromyxobacter sp. Fw109-5



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 73.23 STD DEV: 3.77
Anaeromyxobacter sp. Fw109-5, complete genome - 1..5277990
4466 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2460	 77.68	+1	2872514..2873203	-	229	153005339	-	Anae109_2479	-	GCN5-related N-acetyltransferase
2461	 78.38	+1	2873258..2874760	-	500	153005340	-	Anae109_2480	-	ATPase central domain-containing protein
2462	 72.44	0	2874757..2876592	-	611	153005341	-	Anae109_2481	-	type II secretion system protein E
2463	 74.24	0	2876696..2876893	-	65	153005342	-	Anae109_2482	-	FmdB family regulatory protein
2464	 71.77	0	2877308..2878189	+	293	153005343	-	Anae109_2483	-	hypothetical protein
2465	 74.19	0	2878259..2878750	-	163	153005344	-	Anae109_2484	-	hypothetical protein
2466	 67.59	-1	2878827..2879474	-	215	153005345	-	Anae109_2485	-	inorganic diphosphatase
2467	 71.34	0	2879517..2880458	-	313	153005346	-	Anae109_2486	-	Serine O-acetyltransferase
2468	 69.68	0	2880455..2881384	-	309	153005347	-	Anae109_2487	-	cysteine synthase A
2469	 73.22	0	2881472..2883622	-	716	153005348	-	Anae109_2488	-	excinuclease ABC, C subunit
2470	 75.38	0	2883734..2884399	-	221	153005349	-	Anae109_2489	-	hypothetical protein
2471	 71.32	0	2884547..2885578	-	343	153005350	-	Anae109_2490	-	cytochrome c class I
2472	 73.63	0	2885829..2887709	+	626	153005351	-	Anae109_2491	-	histidine kinase
2473	 74.03	0	2887709..2889067	+	452	153005352	-	Anae109_2492	-	two component, sigma54 specific, Fis family transcriptional regulator
2474	 70.41	0	2889080..2891269	-	729	153005353	-	Anae109_2493	-	excinuclease ABC subunit B
2475	 66.67	-1	2891368..2891571	+	67	153005354	-	Anae109_2494	-	cold-shock DNA-binding domain-containing protein
2476	 72.04	0	2891656..2891841	+	61	153005355	-	Anae109_2495	-	hypothetical protein
2477	 71.91	0	2891884..2893332	-	482	153005356	-	Anae109_2496	-	cysteinyl-tRNA synthetase
2478	 78.04	+1	2893344..2894504	-	386	153005357	-	Anae109_2497	-	2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
2479	 61.63	-2	2894687..2895202	-	171	153005358	-	Anae109_2498	-	CarD family transcriptional regulator
2480	 79.72	+1	2895364..2897715	+	783	153005359	-	Anae109_2499	-	DNA internalization-related competence protein ComEC/Rec2
2481	 67.42	-1	2897718..2897981	+	87	153005360	-	Anae109_2500	-	hypothetical protein
2482	 78.50	+1	2897996..2898916	+	306	153005361	-	Anae109_2501	-	FHA domain-containing protein
2483	 71.67	0	2899085..2899504	-	139	153005362	-	Anae109_2502	-	hypothetical protein
2484	 78.13	+1	2899684..2900913	-	409	153005363	-	Anae109_2503	-	TPR repeat-containing protein
2485	 71.30	0	2900989..2902284	-	431	153005364	-	Anae109_2504	-	adenylosuccinate synthetase
2486	 79.17	+1	2902377..2903408	-	343	153005365	-	Anae109_2505	-	histidine--tRNA ligase
2487	 73.72	0	2903515..2905101	-	528	153005366	-	Anae109_2506	-	D-3-phosphoglycerate dehydrogenase
2488	 71.07	0	2905320..2905955	-	211	153005367	-	Anae109_2507	-	TetR family transcriptional regulator
2489	 75.39	0	2906036..2908465	-	809	153005368	-	Anae109_2508	-	organic solvent tolerance protein OstA-like protein
2490	 75.89	0	2908505..2910055	-	516	153005369	-	Anae109_2509	-	hypothetical protein
2491	 77.56	+1	2910146..2911357	-	403	153005370	-	Anae109_2510	-	FolC bifunctional protein
2492	 69.46	-1	2911484..2912341	-	285	153005371	-	Anae109_2511	-	acetyl-CoA carboxylase, carboxyl transferase, beta subunit
2493	 73.24	0	2912698..2913732	+	344	153005372	-	Anae109_2512	-	phosphoribosylformylglycinamidine cyclo-ligase
2494	 76.19	0	2913729..2914421	+	230	153005373	-	Anae109_2513	-	phosphoribosylglycinamide formyltransferase
2495	 75.65	0	2914575..2916122	+	515	153005374	-	Anae109_2514	-	phytoene dehydrogenase
2496	 70.27	0	2916224..2916445	+	73	153005375	-	Anae109_2515	-	ribosomal protein L28
2497	 76.13	0	2916607..2917917	+	436	153005376	-	Anae109_2516	-	hypothetical protein
2498	 70.27	0	2917942..2918940	-	332	153005377	-	Anae109_2517	-	adenosine deaminase
2499	 76.31	0	2918976..2919452	-	158	153005378	-	Anae109_2518	-	hypothetical protein
2500	 78.21	+1	2919595..2919906	+	103	153005379	-	Anae109_2519	-	hypothetical protein
2501	 72.81	0	2919903..2920748	+	281	153005380	-	Anae109_2520	-	methylenetetrahydrofolate dehydrogenase (NADP(+))
2502	 76.83	0	2920745..2921875	+	376	153005381	-	Anae109_2521	-	metallophosphoesterase
2503	 73.50	0	2922085..2923167	+	360	153005382	-	Anae109_2522	-	glycine cleavage system aminomethyltransferase T
2504	 66.41	-1	2923184..2923567	+	127	153005383	-	Anae109_2523	-	glycine cleavage system H protein
2505	 73.69	0	2923655..2924992	+	445	153005384	-	Anae109_2524	-	glycine dehydrogenase subunit 1
2506	 72.02	0	2924995..2926563	+	522	153005385	-	Anae109_2525	-	glycine dehydrogenase subunit 2
2507	 68.94	-1	2926666..2927148	-	160	153005386	-	Anae109_2526	-	methylglyoxal synthase
2508	 80.05	+1	2927240..2928412	-	390	153005387	-	Anae109_2527	-	TonB family protein
2509	 75.30	0	2928524..2929705	-	393	153005388	-	Anae109_2528	-	TonB family protein
2510	 77.12	+1	2929817..2931730	+	637	153005389	-	Anae109_2529	-	glycosyl transferase family protein
2511	 76.19	0	2931750..2932883	-	377	153005390	-	Anae109_2530	-	hypothetical protein
2512	 64.86	-2	2932912..2933133	-	73	153005391	-	Anae109_2531	-	translation initiation factor IF-1
2513	 65.15	-2	2933230..2933427	-	65	153005392	-	Anae109_2532	-	cold-shock DNA-binding domain-containing protein
2514	 75.48	0	2933602..2934021	-	139	153005393	-	Anae109_2533	-	TPR repeat-containing protein
2515	 70.52	0	2934031..2934939	-	302	153005394	-	Anae109_2534	-	hypothetical protein
2516	 76.09	0	2935125..2935538	+	137	153005395	-	Anae109_2535	-	Holliday junction resolvase YqgF
2517	 74.04	0	2935556..2936572	+	338	153005396	-	Anae109_2536	-	aminodeoxychorismate lyase
2518	 63.43	-2	2936731..2938803	+	690	153005397	-	Anae109_2537	-	putative serine protein kinase, PrkA
2519	 66.67	-1	2938852..2939958	+	368	153005398	-	Anae109_2538	-	hypothetical protein
2520	 64.05	-2	2939967..2941454	+	495	153005399	-	Anae109_2539	-	SpoVR family protein
2521	 74.11	0	2941568..2942857	+	429	153005400	-	Anae109_2540	-	peptidase M23B
2522	 70.21	0	2943082..2943420	-	112	153005401	-	Anae109_2541	-	hypothetical protein
2523	 75.16	0	2943908..2944225	-	105	153005402	-	Anae109_2542	-	hypothetical protein
2524	 75.53	0	2944614..2947085	-	823	153005403	-	Anae109_2543	-	multi-sensor hybrid histidine kinase
2525	 71.41	0	2947204..2949246	-	680	153005404	-	Anae109_2544	-	DEAD/DEAH box helicase domain-containing protein
2526	 70.48	0	2949378..2950451	+	357	153005405	-	Anae109_2545	-	RNA polymerase sigma-70
2527	 81.15	+2	2950448..2951110	-	220	153005406	-	Anae109_2546	-	membrane protein
2528	 75.91	0	2951323..2952090	+	255	153005407	-	Anae109_2547	-	hypothetical protein
2529	 77.02	+1	2952092..2954371	+	759	153005408	-	Anae109_2548	-	hypothetical protein
2530	 71.29	0	2954667..2955164	+	165	153005409	-	Anae109_2549	-	peptidylprolyl isomerase FKBP-type
2531	 79.23	+1	2955216..2956910	-	564	153005410	-	Anae109_2550	-	hypothetical protein
2532	 70.87	0	2956990..2957940	+	316	153005411	-	Anae109_2551	-	hydrolase
2533	 74.14	0	2957937..2958725	+	262	153005412	-	Anae109_2552	-	short-chain dehydrogenase/reductase SDR
2534	 74.32	0	2958751..2959155	+	134	153005413	-	Anae109_2553	-	ferredoxin-like protein
2535	 76.53	0	2959159..2959989	-	276	153005414	-	Anae109_2554	-	hypothetical protein
2536	 69.41	-1	2960478..2961497	-	339	153005415	-	Anae109_2555	-	alcohol dehydrogenase
2537	 66.78	-1	2961664..2962557	+	297	153005416	-	Anae109_2556	-	AraC-like transcriptional regulator
2538	 68.32	-1	2962580..2963125	-	181	153005417	-	Anae109_2557	-	pyruvate phosphate dikinase PEP/pyruvate-binding
2539	 65.81	-1	2963254..2963370	+	38	153005418	-	Anae109_2558	-	phosphoenolpyruvate synthase
2540	 71.62	0	2963498..2964568	+	356	153005419	-	Anae109_2559	-	pirin domain-containing protein
2541	 75.85	0	2964585..2966141	-	518	153005420	-	Anae109_2560	-	PAS/PAC sensor signal transduction histidine kinase
2542	 75.62	0	2966230..2966631	+	133	153005421	-	Anae109_2561	-	hypothetical protein
2543	 77.16	+1	2966632..2967279	-	215	153005422	-	Anae109_2562	-	V-type ATPase, D subunit
2544	 74.55	0	2967276..2968658	-	460	153005423	-	Anae109_2563	-	V-type ATP synthase subunit B
2545	 76.28	0	2968662..2970398	-	578	153005424	-	Anae109_2564	-	V-type ATP synthase subunit A
2546	 78.48	+1	2970395..2970775	-	126	153005425	-	Anae109_2565	-	V-type ATP synthase, F subunit
2547	 81.87	+2	2970772..2971797	-	341	153005426	-	Anae109_2566	-	H+transporting two-sector ATPase C (AC39) subunit
2548	 80.93	+2	2971799..2972380	-	193	153005427	-	Anae109_2567	-	H+transporting two-sector ATPase E subunit
2549	 69.91	0	2972385..2972600	-	71	153005428	-	Anae109_2568	-	H+transporting two-sector ATPase C subunit
2550	 77.00	+1	2972616..2974493	-	625	153005429	-	Anae109_2569	-	V-type ATPase 116 kDa subunit
2551	 75.06	0	2975149..2975589	+	146	153005430	-	Anae109_2570	-	NUDIX hydrolase
2552	 76.66	0	2975653..2976993	-	446	153005431	-	Anae109_2571	-	hypothetical protein
2553	 77.01	+1	2977085..2977867	+	260	153005432	-	Anae109_2572	-	phage SPO1 DNA polymerase-related protein
2554	 75.00	0	2984025..2984696	-	223	153005433	-	Anae109_2573	-	guanylate kinase
2555	 75.23	0	2984686..2985561	-	291	153005434	-	Anae109_2574	-	hypothetical protein
2556	 70.89	0	2985618..2985830	-	70	153005435	-	Anae109_2575	-	hypothetical protein
2557	 78.57	+1	2985851..2986984	-	377	153005436	-	Anae109_2576	-	glycosyl transferase group 1
2558	 73.71	0	2986998..2987480	-	160	153005437	-	Anae109_2577	-	cytidyltransferase-like protein
2559	 75.77	0	2987488..2988498	-	336	153005438	-	Anae109_2578	-	ribokinase-like domain-containing protein
73.23	MEAN

3.77	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.